RNA–Protein interactions for RNA: ENST00000445605.5

FAM49A-203, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 4

Gene FAM49A, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-203ENST00000445605 NISCHQ9Y2I1 1504 aa43.42■■■■■ 4.54
FAM49A-203ENST00000445605 ABCC9O60706 1549 aa39.51■■■■□ 3.92
FAM49A-203ENST00000445605 CCDC180Q9P1Z9 1646 aa39.11■■■■□ 3.85
FAM49A-203ENST00000445605 RB1CC1Q8TDY2 1594 aa37.44■■■■□ 3.58
FAM49A-203ENST00000445605 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
FAM49A-203ENST00000445605 NACADO15069 1562 aa37.08■■■■□ 3.53
FAM49A-203ENST00000445605 DCAF8L2P0C7V8 631 aa36.98■■■■□ 3.51
FAM49A-203ENST00000445605 PABPN1Q86U42 306 aaKnown RBP eCLIP36.76■■■■□ 3.48
FAM49A-203ENST00000445605 UNC13AQ9UPW8 1703 aa36.56■■■■□ 3.44
FAM49A-203ENST00000445605 MYO15BQ96JP2 1530 aa36.4■■■■□ 3.42
FAM49A-203ENST00000445605 BICRAQ9NZM4 1560 aa36.3■■■■□ 3.4
FAM49A-203ENST00000445605 ZCCHC6Q5VYS8 1495 aaKnown RBP35.87■■■■□ 3.33
FAM49A-203ENST00000445605 DCAF1Q9Y4B6 1507 aa35.8■■■■□ 3.32
FAM49A-203ENST00000445605 SHROOM4Q9ULL8 1493 aa35.78■■■■□ 3.32
FAM49A-203ENST00000445605 SCRIBQ14160 1630 aa35.65■■■■□ 3.3
FAM49A-203ENST00000445605 CC2D2AQ9P2K1 1620 aa35.65■■■■□ 3.3
FAM49A-203ENST00000445605 CECR2Q9BXF3 1484 aa35.62■■■■□ 3.29
FAM49A-203ENST00000445605 EIF4G1Q04637 1599 aaKnown RBP35.47■■■■□ 3.27
FAM49A-203ENST00000445605 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
FAM49A-203ENST00000445605 NCAPD3P42695 1498 aa34.22■■■■□ 3.07
FAM49A-203ENST00000445605 ERCC6Q03468 1493 aa34.19■■■■□ 3.06
FAM49A-203ENST00000445605 CUX2O14529 1486 aa34.18■■■■□ 3.06
FAM49A-203ENST00000445605 ATAD2BQ9ULI0 1458 aa34.07■■■■□ 3.05
FAM49A-203ENST00000445605 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
FAM49A-203ENST00000445605 SMARCA4P51532 1647 aa33.95■■■■□ 3.03
FAM49A-203ENST00000445605 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
FAM49A-203ENST00000445605 NESP48681 1621 aa33.82■■■■□ 3
FAM49A-203ENST00000445605 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■□□ 2.99
FAM49A-203ENST00000445605 BAZ1AQ9NRL2 1556 aaPredicted RBP33.74■■■□□ 2.99
FAM49A-203ENST00000445605 PEG3Q9GZU2 1588 aa33.58■■■□□ 2.97
FAM49A-203ENST00000445605 LAMC3Q9Y6N6 1575 aa33.52■■■□□ 2.96
FAM49A-203ENST00000445605 THOC2Q8NI27 1593 aaKnown RBP33.51■■■□□ 2.95
FAM49A-203ENST00000445605 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
FAM49A-203ENST00000445605 PDS5BQ9NTI5 1447 aa33.38■■■□□ 2.93
FAM49A-203ENST00000445605 KIF21AQ7Z4S6 1674 aa33.37■■■□□ 2.93
FAM49A-203ENST00000445605 CADPSQ9ULU8 1353 aa33.2■■■□□ 2.9
FAM49A-203ENST00000445605 MRC2Q9UBG0 1479 aa33.08■■■□□ 2.89
FAM49A-203ENST00000445605 WIZO95785 1651 aa33.05■■■□□ 2.88
FAM49A-203ENST00000445605 TRIM41Q8WV44 630 aa33.02■■■□□ 2.88
FAM49A-203ENST00000445605 WDR62O43379 1518 aa32.98■■■□□ 2.87
FAM49A-203ENST00000445605 CEP164Q9UPV0 1460 aa32.9■■■□□ 2.86
FAM49A-203ENST00000445605 FANCD2Q9BXW9 1451 aa32.82■■■□□ 2.84
FAM49A-203ENST00000445605 CFTRP13569 1480 aa32.71■■■□□ 2.83
FAM49A-203ENST00000445605 OSCARQ8IYS5 282 aa32.64■■■□□ 2.82
FAM49A-203ENST00000445605 RSF1Q96T23 1441 aaPredicted RBP32.62■■■□□ 2.81
FAM49A-203ENST00000445605 TOP2AP11388 1531 aaKnown RBP32.59■■■□□ 2.81
FAM49A-203ENST00000445605 URB2Q14146 1524 aaKnown RBP32.54■■■□□ 2.8
FAM49A-203ENST00000445605 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
FAM49A-203ENST00000445605 CCDC88BA6NC98 1476 aa32.24■■■□□ 2.75
FAM49A-203ENST00000445605 IFT140Q96RY7 1462 aa32.24■■■□□ 2.75
FAM49A-203ENST00000445605 ZNF608Q9ULD9 1512 aaPredicted RBP32.21■■■□□ 2.75
FAM49A-203ENST00000445605 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
FAM49A-203ENST00000445605 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
FAM49A-203ENST00000445605 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
FAM49A-203ENST00000445605 TOPBP1Q92547 1522 aa32.15■■■□□ 2.74
FAM49A-203ENST00000445605 ABCC8Q09428 1581 aa32.08■■■□□ 2.73
FAM49A-203ENST00000445605 ARHGEF11O15085 1522 aa32.04■■■□□ 2.72
FAM49A-203ENST00000445605 EIF4G3O43432 1585 aaKnown RBP32.01■■■□□ 2.71
FAM49A-203ENST00000445605 DNMBPQ6XZF7 1577 aa31.99■■■□□ 2.71
FAM49A-203ENST00000445605 CYB5RLQ6IPT4 315 aa31.92■■■□□ 2.7
FAM49A-203ENST00000445605 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.7
FAM49A-203ENST00000445605 CHD1O14646 1710 aa31.87■■■□□ 2.69
FAM49A-203ENST00000445605 FBLN2P98095 1184 aa31.87■■■□□ 2.69
FAM49A-203ENST00000445605 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
FAM49A-203ENST00000445605 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
FAM49A-203ENST00000445605 TRHP20396 242 aaPredicted RBP31.72■■■□□ 2.67
FAM49A-203ENST00000445605 RAD54L2Q9Y4B4 1467 aa31.7■■■□□ 2.66
FAM49A-203ENST00000445605 SOGA1O94964 1423 aa31.69■■■□□ 2.66
FAM49A-203ENST00000445605 ARAP1Q96P48 1450 aa31.68■■■□□ 2.66
FAM49A-203ENST00000445605 TDRD9Q8NDG6 1382 aaKnown RBP31.67■■■□□ 2.66
FAM49A-203ENST00000445605 SNAPC4Q5SXM2 1469 aa31.55■■■□□ 2.64
FAM49A-203ENST00000445605 FGD5Q6ZNL6 1462 aa31.55■■■□□ 2.64
FAM49A-203ENST00000445605 CHMP7Q8WUX9 453 aaPredicted RBP31.55■■■□□ 2.64
FAM49A-203ENST00000445605 WDR97A6NE52 1622 aa31.52■■■□□ 2.64
FAM49A-203ENST00000445605 SYNJ1O43426 1573 aa31.46■■■□□ 2.63
FAM49A-203ENST00000445605 MAGI1Q96QZ7 1491 aaPredicted RBP31.46■■■□□ 2.63
FAM49A-203ENST00000445605 CUX1P39880 1505 aa31.44■■■□□ 2.62
FAM49A-203ENST00000445605 CLASP1Q7Z460 1538 aa31.44■■■□□ 2.62
FAM49A-203ENST00000445605 GRIN2BQ13224 1484 aa31.43■■■□□ 2.62
FAM49A-203ENST00000445605 SYNJ2O15056 1496 aa31.35■■■□□ 2.61
FAM49A-203ENST00000445605 GAPVD1Q14C86 1478 aa31.28■■■□□ 2.6
FAM49A-203ENST00000445605 PBRM1Q86U86 1689 aa31.28■■■□□ 2.6
FAM49A-203ENST00000445605 ABCA10Q8WWZ4 1543 aa31.16■■■□□ 2.58
FAM49A-203ENST00000445605 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
FAM49A-203ENST00000445605 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
FAM49A-203ENST00000445605 SUPT5HO00267 1087 aaKnown RBP31.04■■■□□ 2.56
FAM49A-203ENST00000445605 GRIN2AQ12879 1464 aa31.01■■■□□ 2.55
FAM49A-203ENST00000445605 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
FAM49A-203ENST00000445605 ERCC6L2Q5T890 1561 aa30.95■■■□□ 2.54
FAM49A-203ENST00000445605 ADAMTS12P58397 1594 aa30.92■■■□□ 2.54
FAM49A-203ENST00000445605 CEP170Q5SW79 1584 aa30.9■■■□□ 2.54
FAM49A-203ENST00000445605 NUP160Q12769 1436 aa30.9■■■□□ 2.54
FAM49A-203ENST00000445605 FHAD1B1AJZ9 1412 aa30.86■■■□□ 2.53
FAM49A-203ENST00000445605 TOP2BQ02880 1626 aa30.85■■■□□ 2.53
FAM49A-203ENST00000445605 BIVM-ERCC5R4GMW8 1640 aa30.85■■■□□ 2.53
FAM49A-203ENST00000445605 SHROOM2Q13796 1616 aa30.79■■■□□ 2.52
FAM49A-203ENST00000445605 ERICH3Q5RHP9 1530 aa30.77■■■□□ 2.52
FAM49A-203ENST00000445605 PRG4Q92954 1404 aaPredicted RBP30.69■■■□□ 2.5
FAM49A-203ENST00000445605 JPH4Q96JJ6 628 aa30.66■■■□□ 2.5
FAM49A-203ENST00000445605 KIF13AQ9H1H9 1805 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms