RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
SEC22C-208ENST00000445388 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
SEC22C-208ENST00000445388 ABCC9O60706 1549 aa32.98■■■□□ 2.87
SEC22C-208ENST00000445388 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
SEC22C-208ENST00000445388 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
SEC22C-208ENST00000445388 NACADO15069 1562 aa31.44■■■□□ 2.62
SEC22C-208ENST00000445388 ZCCHC6Q5VYS8 1495 aaKnown RBP31.19■■■□□ 2.58
SEC22C-208ENST00000445388 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
SEC22C-208ENST00000445388 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
SEC22C-208ENST00000445388 UNC13AQ9UPW8 1703 aa30.86■■■□□ 2.53
SEC22C-208ENST00000445388 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
SEC22C-208ENST00000445388 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
SEC22C-208ENST00000445388 DNAJC5BQ9UF47 199 aa30.55■■■□□ 2.48
SEC22C-208ENST00000445388 SCRIBQ14160 1630 aa30.53■■■□□ 2.48
SEC22C-208ENST00000445388 SHROOM4Q9ULL8 1493 aa30.17■■■□□ 2.42
SEC22C-208ENST00000445388 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
SEC22C-208ENST00000445388 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
SEC22C-208ENST00000445388 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
SEC22C-208ENST00000445388 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
SEC22C-208ENST00000445388 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
SEC22C-208ENST00000445388 NCAPD3P42695 1498 aa29.06■■■□□ 2.24
SEC22C-208ENST00000445388 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
SEC22C-208ENST00000445388 SMARCA2P51531 1590 aa28.96■■■□□ 2.23
SEC22C-208ENST00000445388 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
SEC22C-208ENST00000445388 HMGXB3Q12766 1538 aa28.85■■■□□ 2.21
SEC22C-208ENST00000445388 PEG3Q9GZU2 1588 aa28.83■■■□□ 2.21
SEC22C-208ENST00000445388 BAZ1BQ9UIG0 1483 aaKnown RBP28.79■■■□□ 2.2
SEC22C-208ENST00000445388 WIZO95785 1651 aa28.63■■■□□ 2.17
SEC22C-208ENST00000445388 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
SEC22C-208ENST00000445388 NESP48681 1621 aa28.5■■■□□ 2.15
SEC22C-208ENST00000445388 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
SEC22C-208ENST00000445388 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
SEC22C-208ENST00000445388 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.11
SEC22C-208ENST00000445388 CADPSQ9ULU8 1353 aa28.22■■■□□ 2.11
SEC22C-208ENST00000445388 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
SEC22C-208ENST00000445388 CUX2O14529 1486 aa28.13■■■□□ 2.09
SEC22C-208ENST00000445388 KIF21AQ7Z4S6 1674 aa28.09■■■□□ 2.09
SEC22C-208ENST00000445388 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
SEC22C-208ENST00000445388 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
SEC22C-208ENST00000445388 CFTRP13569 1480 aa27.99■■■□□ 2.07
SEC22C-208ENST00000445388 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.06
SEC22C-208ENST00000445388 MRC2Q9UBG0 1479 aa27.86■■■□□ 2.05
SEC22C-208ENST00000445388 CEP164Q9UPV0 1460 aa27.85■■■□□ 2.05
SEC22C-208ENST00000445388 WDR62O43379 1518 aa27.76■■■□□ 2.03
SEC22C-208ENST00000445388 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
SEC22C-208ENST00000445388 PRDM2Q13029 1718 aa27.69■■■□□ 2.02
SEC22C-208ENST00000445388 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
SEC22C-208ENST00000445388 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
SEC22C-208ENST00000445388 TOPBP1Q92547 1522 aa27.42■■□□□ 1.98
SEC22C-208ENST00000445388 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
SEC22C-208ENST00000445388 DNMBPQ6XZF7 1577 aa27.34■■□□□ 1.97
SEC22C-208ENST00000445388 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
SEC22C-208ENST00000445388 ZNF608Q9ULD9 1512 aaPredicted RBP27.24■■□□□ 1.95
SEC22C-208ENST00000445388 POLA1P09884 1462 aaPredicted RBP27.18■■□□□ 1.94
SEC22C-208ENST00000445388 CUX1P39880 1505 aa27.16■■□□□ 1.94
SEC22C-208ENST00000445388 TARBP1Q13395 1621 aaKnown RBP27.13■■□□□ 1.93
SEC22C-208ENST00000445388 RAD54L2Q9Y4B4 1467 aa27.12■■□□□ 1.93
SEC22C-208ENST00000445388 SOGA1O94964 1423 aa27.09■■□□□ 1.93
SEC22C-208ENST00000445388 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
SEC22C-208ENST00000445388 AQRO60306 1485 aaKnown RBP eCLIP27.07■■□□□ 1.92
SEC22C-208ENST00000445388 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
SEC22C-208ENST00000445388 OSCARQ8IYS5 282 aa27■■□□□ 1.91
SEC22C-208ENST00000445388 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
SEC22C-208ENST00000445388 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
SEC22C-208ENST00000445388 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
SEC22C-208ENST00000445388 TOP2BQ02880 1626 aa26.83■■□□□ 1.89
SEC22C-208ENST00000445388 WDR97A6NE52 1622 aa26.83■■□□□ 1.88
SEC22C-208ENST00000445388 BIVM-ERCC5R4GMW8 1640 aa26.82■■□□□ 1.88
SEC22C-208ENST00000445388 FBLN2P98095 1184 aa26.81■■□□□ 1.88
SEC22C-208ENST00000445388 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
SEC22C-208ENST00000445388 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
SEC22C-208ENST00000445388 CHD1O14646 1710 aa26.76■■□□□ 1.88
SEC22C-208ENST00000445388 GRIN2BQ13224 1484 aa26.75■■□□□ 1.87
SEC22C-208ENST00000445388 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
SEC22C-208ENST00000445388 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
SEC22C-208ENST00000445388 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
SEC22C-208ENST00000445388 PBRM1Q86U86 1689 aa26.67■■□□□ 1.86
SEC22C-208ENST00000445388 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
SEC22C-208ENST00000445388 TRIM41Q8WV44 630 aa26.65■■□□□ 1.86
SEC22C-208ENST00000445388 SYNJ2O15056 1496 aa26.6■■□□□ 1.85
SEC22C-208ENST00000445388 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
SEC22C-208ENST00000445388 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
SEC22C-208ENST00000445388 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
SEC22C-208ENST00000445388 ARHGEF11O15085 1522 aa26.53■■□□□ 1.84
SEC22C-208ENST00000445388 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
SEC22C-208ENST00000445388 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
SEC22C-208ENST00000445388 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
SEC22C-208ENST00000445388 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
SEC22C-208ENST00000445388 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
SEC22C-208ENST00000445388 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
SEC22C-208ENST00000445388 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
SEC22C-208ENST00000445388 ARAP1Q96P48 1450 aa26.32■■□□□ 1.8
SEC22C-208ENST00000445388 CEP170Q5SW79 1584 aa26.32■■□□□ 1.8
SEC22C-208ENST00000445388 IGF1RP08069 1367 aa26.31■■□□□ 1.8
SEC22C-208ENST00000445388 NUP160Q12769 1436 aa26.31■■□□□ 1.8
SEC22C-208ENST00000445388 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
SEC22C-208ENST00000445388 CUL7Q14999 1698 aa26.15■■□□□ 1.78
SEC22C-208ENST00000445388 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.78
SEC22C-208ENST00000445388 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
SEC22C-208ENST00000445388 SHROOM2Q13796 1616 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms