RNA–Protein interactions for RNA: ENST00000445335.1

IFRD1-209, Transcript of interferon related developmental regulator 1, humanhuman

TSL 4

Gene IFRD1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-209ENST00000445335 NISCHQ9Y2I1 1504 aa47.18■■■■■ 5.14
IFRD1-209ENST00000445335 ABCC9O60706 1549 aa42.46■■■■■ 4.39
IFRD1-209ENST00000445335 CCDC180Q9P1Z9 1646 aa42.39■■■■■ 4.38
IFRD1-209ENST00000445335 RB1CC1Q8TDY2 1594 aa40.41■■■■■ 4.06
IFRD1-209ENST00000445335 NACADO15069 1562 aa40.12■■■■■ 4.01
IFRD1-209ENST00000445335 DCAF8L2P0C7V8 631 aa39.88■■■■□ 3.97
IFRD1-209ENST00000445335 DNAJC5BQ9UF47 199 aa39.86■■■■□ 3.97
IFRD1-209ENST00000445335 MYO15BQ96JP2 1530 aa39.54■■■■□ 3.92
IFRD1-209ENST00000445335 PABPN1Q86U42 306 aaKnown RBP eCLIP39.51■■■■□ 3.92
IFRD1-209ENST00000445335 UNC13AQ9UPW8 1703 aa39.43■■■■□ 3.9
IFRD1-209ENST00000445335 BICRAQ9NZM4 1560 aa39.17■■■■□ 3.86
IFRD1-209ENST00000445335 ZCCHC6Q5VYS8 1495 aaKnown RBP39.08■■■■□ 3.85
IFRD1-209ENST00000445335 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
IFRD1-209ENST00000445335 SHROOM4Q9ULL8 1493 aa38.73■■■■□ 3.79
IFRD1-209ENST00000445335 SCRIBQ14160 1630 aa38.6■■■■□ 3.77
IFRD1-209ENST00000445335 CC2D2AQ9P2K1 1620 aa38.35■■■■□ 3.73
IFRD1-209ENST00000445335 CECR2Q9BXF3 1484 aa38.28■■■■□ 3.72
IFRD1-209ENST00000445335 EIF4G1Q04637 1599 aaKnown RBP38.26■■■■□ 3.72
IFRD1-209ENST00000445335 NCAPD3P42695 1498 aa37.01■■■■□ 3.52
IFRD1-209ENST00000445335 ATAD2BQ9ULI0 1458 aa36.88■■■■□ 3.5
IFRD1-209ENST00000445335 SMARCA4P51532 1647 aa36.82■■■■□ 3.49
IFRD1-209ENST00000445335 SMARCA2P51531 1590 aa36.81■■■■□ 3.48
IFRD1-209ENST00000445335 HMGXB3Q12766 1538 aa36.75■■■■□ 3.47
IFRD1-209ENST00000445335 DNAJC5Q9H3Z4 198 aa36.73■■■■□ 3.47
IFRD1-209ENST00000445335 ERCC6Q03468 1493 aa36.72■■■■□ 3.47
IFRD1-209ENST00000445335 CUX2O14529 1486 aa36.69■■■■□ 3.46
IFRD1-209ENST00000445335 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
IFRD1-209ENST00000445335 BAZ1BQ9UIG0 1483 aaKnown RBP36.54■■■■□ 3.44
IFRD1-209ENST00000445335 PEG3Q9GZU2 1588 aa36.47■■■■□ 3.43
IFRD1-209ENST00000445335 NESP48681 1621 aa36.42■■■■□ 3.42
IFRD1-209ENST00000445335 MROH2BQ7Z745 1585 aa36.32■■■■□ 3.41
IFRD1-209ENST00000445335 LAMC3Q9Y6N6 1575 aa36.22■■■■□ 3.39
IFRD1-209ENST00000445335 THOC2Q8NI27 1593 aaKnown RBP36.1■■■■□ 3.37
IFRD1-209ENST00000445335 PDS5BQ9NTI5 1447 aa36.03■■■■□ 3.36
IFRD1-209ENST00000445335 KIF21AQ7Z4S6 1674 aa35.96■■■■□ 3.35
IFRD1-209ENST00000445335 CADPSQ9ULU8 1353 aa35.89■■■■□ 3.34
IFRD1-209ENST00000445335 WIZO95785 1651 aa35.88■■■■□ 3.33
IFRD1-209ENST00000445335 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
IFRD1-209ENST00000445335 WDR62O43379 1518 aa35.61■■■■□ 3.29
IFRD1-209ENST00000445335 CEP164Q9UPV0 1460 aa35.55■■■■□ 3.28
IFRD1-209ENST00000445335 RSF1Q96T23 1441 aaPredicted RBP35.55■■■■□ 3.28
IFRD1-209ENST00000445335 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
IFRD1-209ENST00000445335 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
IFRD1-209ENST00000445335 CFTRP13569 1480 aa35.46■■■■□ 3.27
IFRD1-209ENST00000445335 URB2Q14146 1524 aaKnown RBP35.17■■■■□ 3.22
IFRD1-209ENST00000445335 TRIM41Q8WV44 630 aa35.1■■■■□ 3.21
IFRD1-209ENST00000445335 PRDM2Q13029 1718 aa35.09■■■■□ 3.21
IFRD1-209ENST00000445335 CCDC88BA6NC98 1476 aa35.04■■■■□ 3.2
IFRD1-209ENST00000445335 OSCARQ8IYS5 282 aa34.99■■■■□ 3.19
IFRD1-209ENST00000445335 IFT140Q96RY7 1462 aa34.84■■■■□ 3.17
IFRD1-209ENST00000445335 TOPBP1Q92547 1522 aa34.79■■■■□ 3.16
IFRD1-209ENST00000445335 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
IFRD1-209ENST00000445335 ZNF608Q9ULD9 1512 aaPredicted RBP34.75■■■■□ 3.15
IFRD1-209ENST00000445335 DNMBPQ6XZF7 1577 aa34.67■■■■□ 3.14
IFRD1-209ENST00000445335 EIF4G3O43432 1585 aaKnown RBP34.57■■■■□ 3.13
IFRD1-209ENST00000445335 RIMBP3CA6NJZ7 1639 aa34.51■■■■□ 3.11
IFRD1-209ENST00000445335 RIMBP3BA6NNM3 1639 aa34.51■■■■□ 3.11
IFRD1-209ENST00000445335 RIMBP3Q9UFD9 1639 aa34.51■■■■□ 3.11
IFRD1-209ENST00000445335 TARBP1Q13395 1621 aaKnown RBP34.48■■■■□ 3.11
IFRD1-209ENST00000445335 AQRO60306 1485 aaKnown RBP eCLIP34.43■■■■□ 3.13e-6■■□□□ 12.7
IFRD1-209ENST00000445335 POLA1P09884 1462 aaPredicted RBP34.43■■■■□ 3.1
IFRD1-209ENST00000445335 ARHGEF11O15085 1522 aa34.4■■■■□ 3.1
IFRD1-209ENST00000445335 CHD1O14646 1710 aa34.32■■■■□ 3.08
IFRD1-209ENST00000445335 RAD54L2Q9Y4B4 1467 aa34.29■■■■□ 3.08
IFRD1-209ENST00000445335 SOGA1O94964 1423 aa34.29■■■■□ 3.08
IFRD1-209ENST00000445335 FBLN2P98095 1184 aa34.26■■■■□ 3.08
IFRD1-209ENST00000445335 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
IFRD1-209ENST00000445335 FGD5Q6ZNL6 1462 aa34.2■■■■□ 3.07
IFRD1-209ENST00000445335 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
IFRD1-209ENST00000445335 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
IFRD1-209ENST00000445335 CUX1P39880 1505 aa34.14■■■■□ 3.06
IFRD1-209ENST00000445335 SNAPC4Q5SXM2 1469 aa34.1■■■■□ 3.05
IFRD1-209ENST00000445335 ARAP1Q96P48 1450 aa34.05■■■■□ 3.04
IFRD1-209ENST00000445335 MAGI1Q96QZ7 1491 aaPredicted RBP34.03■■■■□ 3.04
IFRD1-209ENST00000445335 GRIN2BQ13224 1484 aa34.01■■■■□ 3.04
IFRD1-209ENST00000445335 CHMP7Q8WUX9 453 aaPredicted RBP34.01■■■■□ 3.03
IFRD1-209ENST00000445335 SYNJ1O43426 1573 aa33.95■■■■□ 3.03
IFRD1-209ENST00000445335 CLASP1Q7Z460 1538 aa33.94■■■■□ 3.02
IFRD1-209ENST00000445335 SUPT5HO00267 1087 aaKnown RBP33.91■■■■□ 3.02
IFRD1-209ENST00000445335 SYNJ2O15056 1496 aa33.9■■■■□ 3.02
IFRD1-209ENST00000445335 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
IFRD1-209ENST00000445335 PBRM1Q86U86 1689 aa33.85■■■■□ 3.01
IFRD1-209ENST00000445335 TRHP20396 242 aaPredicted RBP33.84■■■■□ 3.01
IFRD1-209ENST00000445335 ABCA10Q8WWZ4 1543 aa33.83■■■■□ 3.01
IFRD1-209ENST00000445335 ABCA5Q8WWZ7 1642 aa33.77■■■■□ 3
IFRD1-209ENST00000445335 WRNQ14191 1432 aaPredicted RBP eCLIP33.69■■■□□ 2.98
IFRD1-209ENST00000445335 TOP2BQ02880 1626 aa33.59■■■□□ 2.97
IFRD1-209ENST00000445335 BIVM-ERCC5R4GMW8 1640 aa33.59■■■□□ 2.97
IFRD1-209ENST00000445335 GRIN2AQ12879 1464 aa33.56■■■□□ 2.96
IFRD1-209ENST00000445335 ADAMTS12P58397 1594 aa33.52■■■□□ 2.96
IFRD1-209ENST00000445335 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.95
IFRD1-209ENST00000445335 NUP160Q12769 1436 aa33.45■■■□□ 2.95
IFRD1-209ENST00000445335 CEP170Q5SW79 1584 aa33.43■■■□□ 2.94
IFRD1-209ENST00000445335 ERICH3Q5RHP9 1530 aa33.41■■■□□ 2.94
IFRD1-209ENST00000445335 ERCC6L2Q5T890 1561 aa33.37■■■□□ 2.93
IFRD1-209ENST00000445335 SHROOM2Q13796 1616 aa33.3■■■□□ 2.92
IFRD1-209ENST00000445335 PRG4Q92954 1404 aaPredicted RBP33.13■■■□□ 2.89
IFRD1-209ENST00000445335 JPH4Q96JJ6 628 aa33.12■■■□□ 2.89
IFRD1-209ENST00000445335 RUSC2Q8N2Y8 1516 aa33.05■■■□□ 2.88
IFRD1-209ENST00000445335 KIF27Q86VH2 1401 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms