RNA–Protein interactions for RNA: ENST00000445241.5

PTPA-222, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-222ENST00000445241 NISCHQ9Y2I1 1504 aa35.47■■■■□ 3.27
PTPA-222ENST00000445241 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
PTPA-222ENST00000445241 ABCC9O60706 1549 aa30.6■■■□□ 2.49
PTPA-222ENST00000445241 NACADO15069 1562 aa29.65■■■□□ 2.34
PTPA-222ENST00000445241 RB1CC1Q8TDY2 1594 aa29.64■■■□□ 2.33
PTPA-222ENST00000445241 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
PTPA-222ENST00000445241 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
PTPA-222ENST00000445241 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
PTPA-222ENST00000445241 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
PTPA-222ENST00000445241 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
PTPA-222ENST00000445241 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
PTPA-222ENST00000445241 SCRIBQ14160 1630 aa28.66■■■□□ 2.18
PTPA-222ENST00000445241 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
PTPA-222ENST00000445241 PABPN1Q86U42 306 aaKnown RBP eCLIP28.53■■■□□ 2.16
PTPA-222ENST00000445241 EIF4G1Q04637 1599 aaKnown RBP27.92■■■□□ 2.06
PTPA-222ENST00000445241 DNAJC5BQ9UF47 199 aa27.92■■■□□ 2.06
PTPA-222ENST00000445241 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
PTPA-222ENST00000445241 CECR2Q9BXF3 1484 aa27.54■■■□□ 2
PTPA-222ENST00000445241 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
PTPA-222ENST00000445241 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
PTPA-222ENST00000445241 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
PTPA-222ENST00000445241 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
PTPA-222ENST00000445241 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
PTPA-222ENST00000445241 ATAD2BQ9ULI0 1458 aa27.31■■□□□ 1.96
PTPA-222ENST00000445241 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.96
PTPA-222ENST00000445241 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
PTPA-222ENST00000445241 BAZ1BQ9UIG0 1483 aaKnown RBP27.09■■□□□ 1.93
PTPA-222ENST00000445241 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
PTPA-222ENST00000445241 WIZO95785 1651 aa26.98■■□□□ 1.91
PTPA-222ENST00000445241 TOP2AP11388 1531 aaKnown RBP26.78■■□□□ 1.88
PTPA-222ENST00000445241 LAMC3Q9Y6N6 1575 aa26.61■■□□□ 1.85
PTPA-222ENST00000445241 NESP48681 1621 aa26.5■■□□□ 1.83
PTPA-222ENST00000445241 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
PTPA-222ENST00000445241 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
PTPA-222ENST00000445241 CCDC88BA6NC98 1476 aa26.4■■□□□ 1.82
PTPA-222ENST00000445241 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.82
PTPA-222ENST00000445241 CFTRP13569 1480 aa26.38■■□□□ 1.81
PTPA-222ENST00000445241 PRDM2Q13029 1718 aa26.29■■□□□ 1.8
PTPA-222ENST00000445241 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
PTPA-222ENST00000445241 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
PTPA-222ENST00000445241 CUX2O14529 1486 aa26.21■■□□□ 1.79
PTPA-222ENST00000445241 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
PTPA-222ENST00000445241 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
PTPA-222ENST00000445241 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
PTPA-222ENST00000445241 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
PTPA-222ENST00000445241 WDR62O43379 1518 aa26.04■■□□□ 1.76
PTPA-222ENST00000445241 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
PTPA-222ENST00000445241 ABCC8Q09428 1581 aa25.88■■□□□ 1.73
PTPA-222ENST00000445241 DNMBPQ6XZF7 1577 aa25.79■■□□□ 1.72
PTPA-222ENST00000445241 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
PTPA-222ENST00000445241 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
PTPA-222ENST00000445241 CUX1P39880 1505 aa25.59■■□□□ 1.69
PTPA-222ENST00000445241 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
PTPA-222ENST00000445241 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
PTPA-222ENST00000445241 FGD5Q6ZNL6 1462 aa25.49■■□□□ 1.67
PTPA-222ENST00000445241 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
PTPA-222ENST00000445241 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
PTPA-222ENST00000445241 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
PTPA-222ENST00000445241 WDR97A6NE52 1622 aa25.45■■□□□ 1.66
PTPA-222ENST00000445241 SOGA1O94964 1423 aa25.44■■□□□ 1.66
PTPA-222ENST00000445241 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
PTPA-222ENST00000445241 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
PTPA-222ENST00000445241 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
PTPA-222ENST00000445241 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
PTPA-222ENST00000445241 ABCA10Q8WWZ4 1543 aa25.32■■□□□ 1.64
PTPA-222ENST00000445241 AQRO60306 1485 aaKnown RBP eCLIP25.26■■□□□ 1.633e-7■■■□□ 15.4
PTPA-222ENST00000445241 TDRD9Q8NDG6 1382 aaKnown RBP25.22■■□□□ 1.63
PTPA-222ENST00000445241 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
PTPA-222ENST00000445241 DNAJC5Q9H3Z4 198 aa25.19■■□□□ 1.62
PTPA-222ENST00000445241 GRIN2BQ13224 1484 aa25.17■■□□□ 1.62
PTPA-222ENST00000445241 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
PTPA-222ENST00000445241 PBRM1Q86U86 1689 aa25.14■■□□□ 1.62
PTPA-222ENST00000445241 MAGI1Q96QZ7 1491 aaPredicted RBP25.13■■□□□ 1.61
PTPA-222ENST00000445241 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
PTPA-222ENST00000445241 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
PTPA-222ENST00000445241 CHD1O14646 1710 aa25.04■■□□□ 1.6
PTPA-222ENST00000445241 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
PTPA-222ENST00000445241 SYNJ2O15056 1496 aa25■■□□□ 1.59
PTPA-222ENST00000445241 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
PTPA-222ENST00000445241 ADAMTS12P58397 1594 aa24.94■■□□□ 1.58
PTPA-222ENST00000445241 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
PTPA-222ENST00000445241 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
PTPA-222ENST00000445241 FBLN2P98095 1184 aa24.88■■□□□ 1.57
PTPA-222ENST00000445241 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
PTPA-222ENST00000445241 CUL7Q14999 1698 aa24.85■■□□□ 1.57
PTPA-222ENST00000445241 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
PTPA-222ENST00000445241 IGF1RP08069 1367 aa24.81■■□□□ 1.56
PTPA-222ENST00000445241 CLASP1Q7Z460 1538 aa24.79■■□□□ 1.56
PTPA-222ENST00000445241 NUP160Q12769 1436 aa24.74■■□□□ 1.55
PTPA-222ENST00000445241 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
PTPA-222ENST00000445241 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
PTPA-222ENST00000445241 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
PTPA-222ENST00000445241 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
PTPA-222ENST00000445241 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
PTPA-222ENST00000445241 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
PTPA-222ENST00000445241 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
PTPA-222ENST00000445241 EEA1Q15075 1411 aa24.62■■□□□ 1.53
PTPA-222ENST00000445241 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
PTPA-222ENST00000445241 SHROOM2Q13796 1616 aa24.58■■□□□ 1.53
PTPA-222ENST00000445241 RAPGEF2Q9Y4G8 1499 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms