RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
SMARCAL1-210ENST00000445153 ABCC9O60706 1549 aa32.2■■■□□ 2.74
SMARCAL1-210ENST00000445153 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
SMARCAL1-210ENST00000445153 RB1CC1Q8TDY2 1594 aa30.52■■■□□ 2.48
SMARCAL1-210ENST00000445153 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
SMARCAL1-210ENST00000445153 NACADO15069 1562 aa30.3■■■□□ 2.44
SMARCAL1-210ENST00000445153 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
SMARCAL1-210ENST00000445153 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.4
SMARCAL1-210ENST00000445153 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
SMARCAL1-210ENST00000445153 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
SMARCAL1-210ENST00000445153 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
SMARCAL1-210ENST00000445153 ZCCHC6Q5VYS8 1495 aaKnown RBP29.59■■■□□ 2.33
SMARCAL1-210ENST00000445153 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
SMARCAL1-210ENST00000445153 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
SMARCAL1-210ENST00000445153 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
SMARCAL1-210ENST00000445153 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
SMARCAL1-210ENST00000445153 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
SMARCAL1-210ENST00000445153 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
SMARCAL1-210ENST00000445153 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
SMARCAL1-210ENST00000445153 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
SMARCAL1-210ENST00000445153 DNAJC5Q9H3Z4 198 aa27.87■■■□□ 2.05
SMARCAL1-210ENST00000445153 SMARCA4P51532 1647 aa27.87■■■□□ 2.05
SMARCAL1-210ENST00000445153 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
SMARCAL1-210ENST00000445153 HMGXB3Q12766 1538 aa27.76■■■□□ 2.03
SMARCAL1-210ENST00000445153 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
SMARCAL1-210ENST00000445153 CUX2O14529 1486 aa27.7■■■□□ 2.02
SMARCAL1-210ENST00000445153 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
SMARCAL1-210ENST00000445153 NESP48681 1621 aa27.67■■■□□ 2.02
SMARCAL1-210ENST00000445153 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
SMARCAL1-210ENST00000445153 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
SMARCAL1-210ENST00000445153 MROH2BQ7Z745 1585 aa27.58■■■□□ 2.01
SMARCAL1-210ENST00000445153 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
SMARCAL1-210ENST00000445153 THOC2Q8NI27 1593 aaKnown RBP27.32■■□□□ 1.96
SMARCAL1-210ENST00000445153 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
SMARCAL1-210ENST00000445153 WIZO95785 1651 aa27.22■■□□□ 1.95
SMARCAL1-210ENST00000445153 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
SMARCAL1-210ENST00000445153 CADPSQ9ULU8 1353 aa27.19■■□□□ 1.94
SMARCAL1-210ENST00000445153 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
SMARCAL1-210ENST00000445153 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
SMARCAL1-210ENST00000445153 WDR62O43379 1518 aa26.93■■□□□ 1.9
SMARCAL1-210ENST00000445153 CFTRP13569 1480 aa26.86■■□□□ 1.89
SMARCAL1-210ENST00000445153 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
SMARCAL1-210ENST00000445153 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
SMARCAL1-210ENST00000445153 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
SMARCAL1-210ENST00000445153 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
SMARCAL1-210ENST00000445153 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
SMARCAL1-210ENST00000445153 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
SMARCAL1-210ENST00000445153 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
SMARCAL1-210ENST00000445153 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
SMARCAL1-210ENST00000445153 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
SMARCAL1-210ENST00000445153 TOPBP1Q92547 1522 aa26.35■■□□□ 1.81
SMARCAL1-210ENST00000445153 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
SMARCAL1-210ENST00000445153 ABCC8Q09428 1581 aa26.22■■□□□ 1.79
SMARCAL1-210ENST00000445153 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
SMARCAL1-210ENST00000445153 EIF4G3O43432 1585 aaKnown RBP26.15■■□□□ 1.78
SMARCAL1-210ENST00000445153 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.78
SMARCAL1-210ENST00000445153 RIMBP3CA6NJZ7 1639 aa26.13■■□□□ 1.77
SMARCAL1-210ENST00000445153 RIMBP3BA6NNM3 1639 aa26.13■■□□□ 1.77
SMARCAL1-210ENST00000445153 RIMBP3Q9UFD9 1639 aa26.13■■□□□ 1.77
SMARCAL1-210ENST00000445153 TARBP1Q13395 1621 aaKnown RBP26.12■■□□□ 1.77
SMARCAL1-210ENST00000445153 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
SMARCAL1-210ENST00000445153 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
SMARCAL1-210ENST00000445153 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
SMARCAL1-210ENST00000445153 SOGA1O94964 1423 aa25.97■■□□□ 1.75
SMARCAL1-210ENST00000445153 TDRD9Q8NDG6 1382 aaKnown RBP25.97■■□□□ 1.75
SMARCAL1-210ENST00000445153 CHD1O14646 1710 aa25.97■■□□□ 1.75
SMARCAL1-210ENST00000445153 FBLN2P98095 1184 aa25.96■■□□□ 1.75
SMARCAL1-210ENST00000445153 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
SMARCAL1-210ENST00000445153 CYB5RLQ6IPT4 315 aa25.91■■□□□ 1.74
SMARCAL1-210ENST00000445153 CUX1P39880 1505 aa25.89■■□□□ 1.74
SMARCAL1-210ENST00000445153 SNAPC4Q5SXM2 1469 aa25.81■■□□□ 1.72
SMARCAL1-210ENST00000445153 ARAP1Q96P48 1450 aa25.79■■□□□ 1.72
SMARCAL1-210ENST00000445153 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
SMARCAL1-210ENST00000445153 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
SMARCAL1-210ENST00000445153 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
SMARCAL1-210ENST00000445153 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
SMARCAL1-210ENST00000445153 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
SMARCAL1-210ENST00000445153 CLASP1Q7Z460 1538 aa25.69■■□□□ 1.7
SMARCAL1-210ENST00000445153 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
SMARCAL1-210ENST00000445153 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
SMARCAL1-210ENST00000445153 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
SMARCAL1-210ENST00000445153 TRHP20396 242 aaPredicted RBP25.61■■□□□ 1.69
SMARCAL1-210ENST00000445153 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
SMARCAL1-210ENST00000445153 PBRM1Q86U86 1689 aa25.58■■□□□ 1.68
SMARCAL1-210ENST00000445153 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
SMARCAL1-210ENST00000445153 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
SMARCAL1-210ENST00000445153 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
SMARCAL1-210ENST00000445153 BIVM-ERCC5R4GMW8 1640 aa25.41■■□□□ 1.66
SMARCAL1-210ENST00000445153 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
SMARCAL1-210ENST00000445153 ERCC6L2Q5T890 1561 aa25.36■■□□□ 1.65
SMARCAL1-210ENST00000445153 ADAMTS12P58397 1594 aa25.35■■□□□ 1.65
SMARCAL1-210ENST00000445153 NUP160Q12769 1436 aa25.33■■□□□ 1.65
SMARCAL1-210ENST00000445153 CEP170Q5SW79 1584 aa25.33■■□□□ 1.65
SMARCAL1-210ENST00000445153 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
SMARCAL1-210ENST00000445153 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
SMARCAL1-210ENST00000445153 SHROOM2Q13796 1616 aa25.2■■□□□ 1.62
SMARCAL1-210ENST00000445153 JPH4Q96JJ6 628 aa25.11■■□□□ 1.61
SMARCAL1-210ENST00000445153 PRG4Q92954 1404 aaPredicted RBP25.11■■□□□ 1.61
SMARCAL1-210ENST00000445153 IGF1RP08069 1367 aa25■■□□□ 1.59
SMARCAL1-210ENST00000445153 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms