RNA–Protein interactions for RNA: ENST00000445048.2

CCDC17-203, Transcript of coiled-coil domain containing 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC17, Length 443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-203ENST00000445048 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.05
CCDC17-203ENST00000445048 CCDC180Q9P1Z9 1646 aa13.16□□□□□ -0.3
CCDC17-203ENST00000445048 ABCC9O60706 1549 aa12.7□□□□□ -0.38
CCDC17-203ENST00000445048 NACADO15069 1562 aa12.32□□□□□ -0.44
CCDC17-203ENST00000445048 RB1CC1Q8TDY2 1594 aa12.32□□□□□ -0.44
CCDC17-203ENST00000445048 MYO15BQ96JP2 1530 aa12.3□□□□□ -0.44
CCDC17-203ENST00000445048 ZCCHC6Q5VYS8 1495 aaKnown RBP12.26□□□□□ -0.45
CCDC17-203ENST00000445048 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
CCDC17-203ENST00000445048 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
CCDC17-203ENST00000445048 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
CCDC17-203ENST00000445048 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.5
CCDC17-203ENST00000445048 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
CCDC17-203ENST00000445048 SHROOM4Q9ULL8 1493 aa11.88□□□□□ -0.51
CCDC17-203ENST00000445048 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC17-203ENST00000445048 DNAJC5BQ9UF47 199 aa11.65□□□□□ -0.54
CCDC17-203ENST00000445048 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
CCDC17-203ENST00000445048 CC2D2AQ9P2K1 1620 aa11.56□□□□□ -0.56
CCDC17-203ENST00000445048 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
CCDC17-203ENST00000445048 SMARCA4P51532 1647 aa11.42□□□□□ -0.58
CCDC17-203ENST00000445048 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
CCDC17-203ENST00000445048 PEG3Q9GZU2 1588 aa11.36□□□□□ -0.59
CCDC17-203ENST00000445048 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
CCDC17-203ENST00000445048 SMARCA2P51531 1590 aa11.35□□□□□ -0.59
CCDC17-203ENST00000445048 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
CCDC17-203ENST00000445048 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
CCDC17-203ENST00000445048 MROH2BQ7Z745 1585 aa11.31□□□□□ -0.6
CCDC17-203ENST00000445048 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
CCDC17-203ENST00000445048 WIZO95785 1651 aa11.21□□□□□ -0.61
CCDC17-203ENST00000445048 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
CCDC17-203ENST00000445048 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
CCDC17-203ENST00000445048 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
CCDC17-203ENST00000445048 NESP48681 1621 aa11.01□□□□□ -0.65
CCDC17-203ENST00000445048 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
CCDC17-203ENST00000445048 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
CCDC17-203ENST00000445048 KIF21AQ7Z4S6 1674 aa10.98□□□□□ -0.65
CCDC17-203ENST00000445048 ERCC6Q03468 1493 aa10.95□□□□□ -0.66
CCDC17-203ENST00000445048 CFTRP13569 1480 aa10.94□□□□□ -0.66
CCDC17-203ENST00000445048 PDS5BQ9NTI5 1447 aa10.94□□□□□ -0.66
CCDC17-203ENST00000445048 CCDC88BA6NC98 1476 aa10.93□□□□□ -0.66
CCDC17-203ENST00000445048 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
CCDC17-203ENST00000445048 CUX2O14529 1486 aa10.91□□□□□ -0.66
CCDC17-203ENST00000445048 FANCD2Q9BXW9 1451 aa10.85□□□□□ -0.67
CCDC17-203ENST00000445048 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
CCDC17-203ENST00000445048 MRC2Q9UBG0 1479 aa10.82□□□□□ -0.68
CCDC17-203ENST00000445048 WDR62O43379 1518 aa10.82□□□□□ -0.68
CCDC17-203ENST00000445048 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
CCDC17-203ENST00000445048 URB2Q14146 1524 aaKnown RBP10.75□□□□□ -0.69
CCDC17-203ENST00000445048 ABCC8Q09428 1581 aa10.74□□□□□ -0.69
CCDC17-203ENST00000445048 DNMBPQ6XZF7 1577 aa10.7□□□□□ -0.7
CCDC17-203ENST00000445048 TOPBP1Q92547 1522 aa10.69□□□□□ -0.7
CCDC17-203ENST00000445048 IFT140Q96RY7 1462 aa10.62□□□□□ -0.71
CCDC17-203ENST00000445048 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
CCDC17-203ENST00000445048 CUX1P39880 1505 aa10.61□□□□□ -0.71
CCDC17-203ENST00000445048 POLA1P09884 1462 aaPredicted RBP10.6□□□□□ -0.71
CCDC17-203ENST00000445048 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
CCDC17-203ENST00000445048 BIVM-ERCC5R4GMW8 1640 aa10.58□□□□□ -0.72
CCDC17-203ENST00000445048 TOP2BQ02880 1626 aa10.57□□□□□ -0.72
CCDC17-203ENST00000445048 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
CCDC17-203ENST00000445048 EIF4G3O43432 1585 aaKnown RBP10.55□□□□□ -0.72
CCDC17-203ENST00000445048 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
CCDC17-203ENST00000445048 SOGA1O94964 1423 aa10.53□□□□□ -0.72
CCDC17-203ENST00000445048 WRNQ14191 1432 aaPredicted RBP eCLIP10.53□□□□□ -0.72
CCDC17-203ENST00000445048 DNAJC5Q9H3Z4 198 aa10.52□□□□□ -0.73
CCDC17-203ENST00000445048 SYNJ1O43426 1573 aa10.52□□□□□ -0.73
CCDC17-203ENST00000445048 RAD54L2Q9Y4B4 1467 aa10.51□□□□□ -0.73
CCDC17-203ENST00000445048 ABCA10Q8WWZ4 1543 aa10.49□□□□□ -0.73
CCDC17-203ENST00000445048 PBRM1Q86U86 1689 aa10.48□□□□□ -0.73
CCDC17-203ENST00000445048 AQRO60306 1485 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC17-203ENST00000445048 ABCA5Q8WWZ7 1642 aa10.47□□□□□ -0.73
CCDC17-203ENST00000445048 CHD1O14646 1710 aa10.46□□□□□ -0.74
CCDC17-203ENST00000445048 TDRD9Q8NDG6 1382 aaKnown RBP10.44□□□□□ -0.74
CCDC17-203ENST00000445048 GRIN2BQ13224 1484 aa10.42□□□□□ -0.74
CCDC17-203ENST00000445048 GAPVD1Q14C86 1478 aa10.42□□□□□ -0.74
CCDC17-203ENST00000445048 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
CCDC17-203ENST00000445048 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
CCDC17-203ENST00000445048 SNAPC4Q5SXM2 1469 aa10.39□□□□□ -0.75
CCDC17-203ENST00000445048 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
CCDC17-203ENST00000445048 SYNJ2O15056 1496 aa10.37□□□□□ -0.75
CCDC17-203ENST00000445048 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
CCDC17-203ENST00000445048 CUL7Q14999 1698 aa10.31□□□□□ -0.76
CCDC17-203ENST00000445048 CHMP7Q8WUX9 453 aaPredicted RBP10.31□□□□□ -0.76
CCDC17-203ENST00000445048 CLASP1Q7Z460 1538 aa10.31□□□□□ -0.76
CCDC17-203ENST00000445048 FHAD1B1AJZ9 1412 aa10.31□□□□□ -0.76
CCDC17-203ENST00000445048 KIF27Q86VH2 1401 aa10.31□□□□□ -0.76
CCDC17-203ENST00000445048 GRIN2AQ12879 1464 aa10.3□□□□□ -0.76
CCDC17-203ENST00000445048 RIMBP3CA6NJZ7 1639 aa10.29□□□□□ -0.76
CCDC17-203ENST00000445048 RIMBP3BA6NNM3 1639 aa10.29□□□□□ -0.76
CCDC17-203ENST00000445048 RIMBP3Q9UFD9 1639 aa10.29□□□□□ -0.76
CCDC17-203ENST00000445048 FBLN2P98095 1184 aa10.28□□□□□ -0.76
CCDC17-203ENST00000445048 IGF1RP08069 1367 aa10.26□□□□□ -0.77
CCDC17-203ENST00000445048 NUP160Q12769 1436 aa10.26□□□□□ -0.77
CCDC17-203ENST00000445048 ARHGEF11O15085 1522 aa10.26□□□□□ -0.77
CCDC17-203ENST00000445048 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
CCDC17-203ENST00000445048 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
CCDC17-203ENST00000445048 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
CCDC17-203ENST00000445048 CARMIL1Q5VZK9 1371 aa10.2□□□□□ -0.78
CCDC17-203ENST00000445048 RUSC2Q8N2Y8 1516 aa10.2□□□□□ -0.78
CCDC17-203ENST00000445048 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
CCDC17-203ENST00000445048 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
CCDC17-203ENST00000445048 RAPGEF2Q9Y4G8 1499 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms