RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 NISCHQ9Y2I1 1504 aa46.24■■■■■ 4.99
LRRC42-204ENST00000444987 CCDC180Q9P1Z9 1646 aa41.26■■■■■ 4.2
LRRC42-204ENST00000444987 ABCC9O60706 1549 aa40.31■■■■■ 4.04
LRRC42-204ENST00000444987 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
LRRC42-204ENST00000444987 NACADO15069 1562 aa38.81■■■■□ 3.8
LRRC42-204ENST00000444987 MYO15BQ96JP2 1530 aa38.6■■■■□ 3.77
LRRC42-204ENST00000444987 DCAF8L2P0C7V8 631 aa38.52■■■■□ 3.76
LRRC42-204ENST00000444987 ZCCHC6Q5VYS8 1495 aaKnown RBP38.49■■■■□ 3.75
LRRC42-204ENST00000444987 DCAF1Q9Y4B6 1507 aa38.36■■■■□ 3.73
LRRC42-204ENST00000444987 UNC13AQ9UPW8 1703 aa37.93■■■■□ 3.66
LRRC42-204ENST00000444987 BICRAQ9NZM4 1560 aa37.63■■■■□ 3.61
LRRC42-204ENST00000444987 PABPN1Q86U42 306 aaKnown RBP eCLIP37.58■■■■□ 3.61
LRRC42-204ENST00000444987 SCRIBQ14160 1630 aa37.47■■■■□ 3.59
LRRC42-204ENST00000444987 SHROOM4Q9ULL8 1493 aa37.39■■■■□ 3.58
LRRC42-204ENST00000444987 DNAJC5BQ9UF47 199 aa37.06■■■■□ 3.52
LRRC42-204ENST00000444987 EIF4G1Q04637 1599 aaKnown RBP36.66■■■■□ 3.46
LRRC42-204ENST00000444987 CC2D2AQ9P2K1 1620 aa36.52■■■■□ 3.44
LRRC42-204ENST00000444987 CECR2Q9BXF3 1484 aa36.29■■■■□ 3.4
LRRC42-204ENST00000444987 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
LRRC42-204ENST00000444987 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
LRRC42-204ENST00000444987 NCAPD3P42695 1498 aa35.78■■■■□ 3.32
LRRC42-204ENST00000444987 SMARCA2P51531 1590 aa35.75■■■■□ 3.31
LRRC42-204ENST00000444987 ATAD2BQ9ULI0 1458 aa35.73■■■■□ 3.31
LRRC42-204ENST00000444987 PEG3Q9GZU2 1588 aa35.63■■■■□ 3.29
LRRC42-204ENST00000444987 HMGXB3Q12766 1538 aa35.61■■■■□ 3.29
LRRC42-204ENST00000444987 MROH2BQ7Z745 1585 aa35.57■■■■□ 3.28
LRRC42-204ENST00000444987 BAZ1BQ9UIG0 1483 aaKnown RBP35.43■■■■□ 3.26
LRRC42-204ENST00000444987 WIZO95785 1651 aa35.19■■■■□ 3.22
LRRC42-204ENST00000444987 RSF1Q96T23 1441 aaPredicted RBP35.13■■■■□ 3.21
LRRC42-204ENST00000444987 LAMC3Q9Y6N6 1575 aa34.88■■■■□ 3.17
LRRC42-204ENST00000444987 TOP2AP11388 1531 aaKnown RBP34.87■■■■□ 3.17
LRRC42-204ENST00000444987 NESP48681 1621 aa34.83■■■■□ 3.17
LRRC42-204ENST00000444987 ERCC6Q03468 1493 aa34.8■■■■□ 3.16
LRRC42-204ENST00000444987 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.15
LRRC42-204ENST00000444987 PDS5BQ9NTI5 1447 aa34.63■■■■□ 3.13
LRRC42-204ENST00000444987 CUX2O14529 1486 aa34.58■■■■□ 3.13
LRRC42-204ENST00000444987 KIF21AQ7Z4S6 1674 aa34.48■■■■□ 3.11
LRRC42-204ENST00000444987 CFTRP13569 1480 aa34.47■■■■□ 3.11
LRRC42-204ENST00000444987 THOC2Q8NI27 1593 aaKnown RBP34.43■■■■□ 3.1
LRRC42-204ENST00000444987 CCDC88BA6NC98 1476 aa34.4■■■■□ 3.1
LRRC42-204ENST00000444987 PRDM2Q13029 1718 aa34.28■■■■□ 3.08
LRRC42-204ENST00000444987 FANCD2Q9BXW9 1451 aa34.27■■■■□ 3.08
LRRC42-204ENST00000444987 CEP164Q9UPV0 1460 aa34.27■■■■□ 3.08
LRRC42-204ENST00000444987 MRC2Q9UBG0 1479 aa34.25■■■■□ 3.07
LRRC42-204ENST00000444987 WDR62O43379 1518 aa34.15■■■■□ 3.06
LRRC42-204ENST00000444987 SUPT5HO00267 1087 aaKnown RBP34.03■■■■□ 3.04
LRRC42-204ENST00000444987 URB2Q14146 1524 aaKnown RBP33.92■■■■□ 3.02
LRRC42-204ENST00000444987 ABCC8Q09428 1581 aa33.82■■■■□ 3
LRRC42-204ENST00000444987 TOPBP1Q92547 1522 aa33.72■■■□□ 2.99
LRRC42-204ENST00000444987 DNMBPQ6XZF7 1577 aa33.7■■■□□ 2.99
LRRC42-204ENST00000444987 DNAJC5Q9H3Z4 198 aa33.6■■■□□ 2.97
LRRC42-204ENST00000444987 IFT140Q96RY7 1462 aa33.58■■■□□ 2.97
LRRC42-204ENST00000444987 POLA1P09884 1462 aaPredicted RBP33.42■■■□□ 2.94
LRRC42-204ENST00000444987 CUX1P39880 1505 aa33.38■■■□□ 2.93
LRRC42-204ENST00000444987 TARBP1Q13395 1621 aaKnown RBP33.38■■■□□ 2.93
LRRC42-204ENST00000444987 ZNF608Q9ULD9 1512 aaPredicted RBP33.33■■■□□ 2.93
LRRC42-204ENST00000444987 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
LRRC42-204ENST00000444987 SOGA1O94964 1423 aa33.28■■■□□ 2.92
LRRC42-204ENST00000444987 EIF4G3O43432 1585 aaKnown RBP33.26■■■□□ 2.92
LRRC42-204ENST00000444987 WDR97A6NE52 1622 aa33.24■■■□□ 2.91
LRRC42-204ENST00000444987 RAD54L2Q9Y4B4 1467 aa33.21■■■□□ 2.91
LRRC42-204ENST00000444987 WRNQ14191 1432 aaPredicted RBP eCLIP33.15■■■□□ 2.9
LRRC42-204ENST00000444987 BIVM-ERCC5R4GMW8 1640 aa33.14■■■□□ 2.9
LRRC42-204ENST00000444987 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
LRRC42-204ENST00000444987 AQRO60306 1485 aaKnown RBP eCLIP33.13■■■□□ 2.89
LRRC42-204ENST00000444987 OSCARQ8IYS5 282 aa33.06■■■□□ 2.88
LRRC42-204ENST00000444987 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
LRRC42-204ENST00000444987 SYNJ1O43426 1573 aa33.04■■■□□ 2.88
LRRC42-204ENST00000444987 ABCA10Q8WWZ4 1543 aa33.03■■■□□ 2.88
LRRC42-204ENST00000444987 GRIN2BQ13224 1484 aa32.94■■■□□ 2.86
LRRC42-204ENST00000444987 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
LRRC42-204ENST00000444987 GAPVD1Q14C86 1478 aa32.9■■■□□ 2.86
LRRC42-204ENST00000444987 MAGI1Q96QZ7 1491 aaPredicted RBP32.89■■■□□ 2.86
LRRC42-204ENST00000444987 CHD1O14646 1710 aa32.87■■■□□ 2.85
LRRC42-204ENST00000444987 PBRM1Q86U86 1689 aa32.87■■■□□ 2.85
LRRC42-204ENST00000444987 SNAPC4Q5SXM2 1469 aa32.86■■■□□ 2.85
LRRC42-204ENST00000444987 SYNJ2O15056 1496 aa32.74■■■□□ 2.83
LRRC42-204ENST00000444987 FBLN2P98095 1184 aa32.73■■■□□ 2.83
LRRC42-204ENST00000444987 CHMP7Q8WUX9 453 aaPredicted RBP32.69■■■□□ 2.82
LRRC42-204ENST00000444987 ERICH3Q5RHP9 1530 aa32.67■■■□□ 2.82
LRRC42-204ENST00000444987 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
LRRC42-204ENST00000444987 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
LRRC42-204ENST00000444987 CLASP1Q7Z460 1538 aa32.54■■■□□ 2.8
LRRC42-204ENST00000444987 RIMBP3CA6NJZ7 1639 aa32.53■■■□□ 2.8
LRRC42-204ENST00000444987 RIMBP3BA6NNM3 1639 aa32.53■■■□□ 2.8
LRRC42-204ENST00000444987 RIMBP3Q9UFD9 1639 aa32.53■■■□□ 2.8
LRRC42-204ENST00000444987 ARHGEF11O15085 1522 aa32.51■■■□□ 2.79
LRRC42-204ENST00000444987 GRIN2AQ12879 1464 aa32.49■■■□□ 2.79
LRRC42-204ENST00000444987 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
LRRC42-204ENST00000444987 NUP160Q12769 1436 aa32.37■■■□□ 2.77
LRRC42-204ENST00000444987 CUL7Q14999 1698 aa32.35■■■□□ 2.77
LRRC42-204ENST00000444987 IGF1RP08069 1367 aa32.34■■■□□ 2.77
LRRC42-204ENST00000444987 CEP170Q5SW79 1584 aa32.32■■■□□ 2.76
LRRC42-204ENST00000444987 TRIM41Q8WV44 630 aa32.31■■■□□ 2.76
LRRC42-204ENST00000444987 ARAP1Q96P48 1450 aa32.22■■■□□ 2.75
LRRC42-204ENST00000444987 SHROOM2Q13796 1616 aa32.18■■■□□ 2.74
LRRC42-204ENST00000444987 CYB5RLQ6IPT4 315 aa32.15■■■□□ 2.74
LRRC42-204ENST00000444987 CARMIL1Q5VZK9 1371 aa32.15■■■□□ 2.74
LRRC42-204ENST00000444987 RUSC2Q8N2Y8 1516 aa32.1■■■□□ 2.73
LRRC42-204ENST00000444987 KIAA0586Q9BVV6 1533 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms