RNA–Protein interactions for RNA: ENST00000444906.1

SLC4A3-208, Transcript of solute carrier family 4 member 3, humanhuman

TSL 5

Gene SLC4A3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-208ENST00000444906 NISCHQ9Y2I1 1504 aa42.54■■■■■ 4.4
SLC4A3-208ENST00000444906 CCDC180Q9P1Z9 1646 aa38.02■■■■□ 3.68
SLC4A3-208ENST00000444906 ABCC9O60706 1549 aa37.36■■■■□ 3.57
SLC4A3-208ENST00000444906 RB1CC1Q8TDY2 1594 aa35.87■■■■□ 3.33
SLC4A3-208ENST00000444906 NACADO15069 1562 aa35.76■■■■□ 3.32
SLC4A3-208ENST00000444906 DCAF8L2P0C7V8 631 aa35.5■■■■□ 3.27
SLC4A3-208ENST00000444906 MYO15BQ96JP2 1530 aa35.48■■■■□ 3.27
SLC4A3-208ENST00000444906 ZCCHC6Q5VYS8 1495 aaKnown RBP35.4■■■■□ 3.26
SLC4A3-208ENST00000444906 DCAF1Q9Y4B6 1507 aa35.22■■■■□ 3.23
SLC4A3-208ENST00000444906 UNC13AQ9UPW8 1703 aa35.12■■■■□ 3.21
SLC4A3-208ENST00000444906 BICRAQ9NZM4 1560 aa34.81■■■■□ 3.16
SLC4A3-208ENST00000444906 PABPN1Q86U42 306 aaKnown RBP eCLIP34.8■■■■□ 3.16
SLC4A3-208ENST00000444906 SCRIBQ14160 1630 aa34.6■■■■□ 3.13
SLC4A3-208ENST00000444906 DNAJC5BQ9UF47 199 aa34.51■■■■□ 3.12
SLC4A3-208ENST00000444906 SHROOM4Q9ULL8 1493 aa34.44■■■■□ 3.1
SLC4A3-208ENST00000444906 EIF4G1Q04637 1599 aaKnown RBP33.9■■■■□ 3.02
SLC4A3-208ENST00000444906 CC2D2AQ9P2K1 1620 aa33.83■■■■□ 3.01
SLC4A3-208ENST00000444906 CECR2Q9BXF3 1484 aa33.62■■■□□ 2.97
SLC4A3-208ENST00000444906 SMARCA4P51532 1647 aa33.1■■■□□ 2.89
SLC4A3-208ENST00000444906 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
SLC4A3-208ENST00000444906 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
SLC4A3-208ENST00000444906 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
SLC4A3-208ENST00000444906 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
SLC4A3-208ENST00000444906 HMGXB3Q12766 1538 aa32.83■■■□□ 2.85
SLC4A3-208ENST00000444906 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
SLC4A3-208ENST00000444906 MROH2BQ7Z745 1585 aa32.77■■■□□ 2.84
SLC4A3-208ENST00000444906 BAZ1BQ9UIG0 1483 aaKnown RBP32.66■■■□□ 2.82
SLC4A3-208ENST00000444906 WIZO95785 1651 aa32.42■■■□□ 2.78
SLC4A3-208ENST00000444906 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.76
SLC4A3-208ENST00000444906 NESP48681 1621 aa32.26■■■□□ 2.75
SLC4A3-208ENST00000444906 ERCC6Q03468 1493 aa32.23■■■□□ 2.75
SLC4A3-208ENST00000444906 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
SLC4A3-208ENST00000444906 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
SLC4A3-208ENST00000444906 CUX2O14529 1486 aa32.03■■■□□ 2.72
SLC4A3-208ENST00000444906 CADPSQ9ULU8 1353 aa31.97■■■□□ 2.71
SLC4A3-208ENST00000444906 KIF21AQ7Z4S6 1674 aa31.94■■■□□ 2.7
SLC4A3-208ENST00000444906 PDS5BQ9NTI5 1447 aa31.92■■■□□ 2.7
SLC4A3-208ENST00000444906 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
SLC4A3-208ENST00000444906 CFTRP13569 1480 aa31.75■■■□□ 2.67
SLC4A3-208ENST00000444906 CCDC88BA6NC98 1476 aa31.65■■■□□ 2.66
SLC4A3-208ENST00000444906 MRC2Q9UBG0 1479 aa31.64■■■□□ 2.66
SLC4A3-208ENST00000444906 CEP164Q9UPV0 1460 aa31.63■■■□□ 2.65
SLC4A3-208ENST00000444906 FANCD2Q9BXW9 1451 aa31.62■■■□□ 2.65
SLC4A3-208ENST00000444906 PRDM2Q13029 1718 aa31.6■■■□□ 2.65
SLC4A3-208ENST00000444906 WDR62O43379 1518 aa31.58■■■□□ 2.65
SLC4A3-208ENST00000444906 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
SLC4A3-208ENST00000444906 DNAJC5Q9H3Z4 198 aa31.32■■■□□ 2.6
SLC4A3-208ENST00000444906 SUPT5HO00267 1087 aaKnown RBP31.13■■■□□ 2.57
SLC4A3-208ENST00000444906 TOPBP1Q92547 1522 aa31.1■■■□□ 2.57
SLC4A3-208ENST00000444906 ABCC8Q09428 1581 aa31.09■■■□□ 2.57
SLC4A3-208ENST00000444906 DNMBPQ6XZF7 1577 aa31.06■■■□□ 2.56
SLC4A3-208ENST00000444906 IFT140Q96RY7 1462 aa30.97■■■□□ 2.55
SLC4A3-208ENST00000444906 ZNF608Q9ULD9 1512 aaPredicted RBP30.84■■■□□ 2.53
SLC4A3-208ENST00000444906 TARBP1Q13395 1621 aaKnown RBP30.82■■■□□ 2.52
SLC4A3-208ENST00000444906 POLA1P09884 1462 aaPredicted RBP30.82■■■□□ 2.52
SLC4A3-208ENST00000444906 EIF4G3O43432 1585 aaKnown RBP30.76■■■□□ 2.52
SLC4A3-208ENST00000444906 CUX1P39880 1505 aa30.76■■■□□ 2.51
SLC4A3-208ENST00000444906 FGD5Q6ZNL6 1462 aa30.7■■■□□ 2.5
SLC4A3-208ENST00000444906 RAD54L2Q9Y4B4 1467 aa30.65■■■□□ 2.5
SLC4A3-208ENST00000444906 SOGA1O94964 1423 aa30.64■■■□□ 2.5
SLC4A3-208ENST00000444906 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.49
SLC4A3-208ENST00000444906 WDR97A6NE52 1622 aa30.58■■■□□ 2.49
SLC4A3-208ENST00000444906 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
SLC4A3-208ENST00000444906 TDRD9Q8NDG6 1382 aaKnown RBP30.49■■■□□ 2.47
SLC4A3-208ENST00000444906 BIVM-ERCC5R4GMW8 1640 aa30.47■■■□□ 2.47
SLC4A3-208ENST00000444906 CHD1O14646 1710 aa30.44■■■□□ 2.46
SLC4A3-208ENST00000444906 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
SLC4A3-208ENST00000444906 WRNQ14191 1432 aaPredicted RBP eCLIP30.43■■■□□ 2.46
SLC4A3-208ENST00000444906 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
SLC4A3-208ENST00000444906 ABCA10Q8WWZ4 1543 aa30.4■■■□□ 2.46
SLC4A3-208ENST00000444906 GRIN2BQ13224 1484 aa30.35■■■□□ 2.45
SLC4A3-208ENST00000444906 SNAPC4Q5SXM2 1469 aa30.35■■■□□ 2.45
SLC4A3-208ENST00000444906 PBRM1Q86U86 1689 aa30.34■■■□□ 2.45
SLC4A3-208ENST00000444906 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
SLC4A3-208ENST00000444906 MAGI1Q96QZ7 1491 aaPredicted RBP30.32■■■□□ 2.44
SLC4A3-208ENST00000444906 GAPVD1Q14C86 1478 aa30.31■■■□□ 2.44
SLC4A3-208ENST00000444906 FBLN2P98095 1184 aa30.23■■■□□ 2.43
SLC4A3-208ENST00000444906 RIMBP3CA6NJZ7 1639 aa30.21■■■□□ 2.43
SLC4A3-208ENST00000444906 RIMBP3BA6NNM3 1639 aa30.21■■■□□ 2.43
SLC4A3-208ENST00000444906 RIMBP3Q9UFD9 1639 aa30.21■■■□□ 2.43
SLC4A3-208ENST00000444906 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
SLC4A3-208ENST00000444906 ARHGEF11O15085 1522 aa30.15■■■□□ 2.42
SLC4A3-208ENST00000444906 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
SLC4A3-208ENST00000444906 TRIM41Q8WV44 630 aa30.12■■■□□ 2.41
SLC4A3-208ENST00000444906 CLASP1Q7Z460 1538 aa30.1■■■□□ 2.41
SLC4A3-208ENST00000444906 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
SLC4A3-208ENST00000444906 ERICH3Q5RHP9 1530 aa30.04■■■□□ 2.4
SLC4A3-208ENST00000444906 GRIN2AQ12879 1464 aa29.98■■■□□ 2.39
SLC4A3-208ENST00000444906 FHAD1B1AJZ9 1412 aa29.95■■■□□ 2.38
SLC4A3-208ENST00000444906 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
SLC4A3-208ENST00000444906 NUP160Q12769 1436 aa29.86■■■□□ 2.37
SLC4A3-208ENST00000444906 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
SLC4A3-208ENST00000444906 KIF27Q86VH2 1401 aa29.82■■■□□ 2.36
SLC4A3-208ENST00000444906 CYB5RLQ6IPT4 315 aa29.8■■■□□ 2.36
SLC4A3-208ENST00000444906 CUL7Q14999 1698 aa29.74■■■□□ 2.35
SLC4A3-208ENST00000444906 IGF1RP08069 1367 aa29.71■■■□□ 2.35
SLC4A3-208ENST00000444906 SHROOM2Q13796 1616 aa29.71■■■□□ 2.35
SLC4A3-208ENST00000444906 RUSC2Q8N2Y8 1516 aa29.64■■■□□ 2.34
SLC4A3-208ENST00000444906 ERCC6L2Q5T890 1561 aa29.63■■■□□ 2.33
SLC4A3-208ENST00000444906 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms