RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 NISCHQ9Y2I1 1504 aa40.81■■■■■ 4.12
SHC1-209ENST00000444664 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
SHC1-209ENST00000444664 ABCC9O60706 1549 aa35.54■■■■□ 3.28
SHC1-209ENST00000444664 RB1CC1Q8TDY2 1594 aa34.15■■■■□ 3.06
SHC1-209ENST00000444664 NACADO15069 1562 aa34.09■■■■□ 3.05
SHC1-209ENST00000444664 DCAF8L2P0C7V8 631 aa34.08■■■■□ 3.05
SHC1-209ENST00000444664 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
SHC1-209ENST00000444664 MYO15BQ96JP2 1530 aa33.85■■■■□ 3.01
SHC1-209ENST00000444664 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
SHC1-209ENST00000444664 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
SHC1-209ENST00000444664 PABPN1Q86U42 306 aaKnown RBP eCLIP33.19■■■□□ 2.91e-6■■■□□ 17
SHC1-209ENST00000444664 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
SHC1-209ENST00000444664 BICRAQ9NZM4 1560 aa33.16■■■□□ 2.9
SHC1-209ENST00000444664 SHROOM4Q9ULL8 1493 aa32.71■■■□□ 2.83
SHC1-209ENST00000444664 DNAJC5BQ9UF47 199 aa32.6■■■□□ 2.81
SHC1-209ENST00000444664 EIF4G1Q04637 1599 aaKnown RBP32.27■■■□□ 2.76
SHC1-209ENST00000444664 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
SHC1-209ENST00000444664 CECR2Q9BXF3 1484 aa31.89■■■□□ 2.7
SHC1-209ENST00000444664 SMARCA4P51532 1647 aa31.7■■■□□ 2.66
SHC1-209ENST00000444664 BAZ1AQ9NRL2 1556 aaPredicted RBP31.63■■■□□ 2.65
SHC1-209ENST00000444664 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
SHC1-209ENST00000444664 MROH2BQ7Z745 1585 aa31.48■■■□□ 2.63
SHC1-209ENST00000444664 NCAPD3P42695 1498 aa31.44■■■□□ 2.62
SHC1-209ENST00000444664 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
SHC1-209ENST00000444664 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
SHC1-209ENST00000444664 HMGXB3Q12766 1538 aa31.32■■■□□ 2.6
SHC1-209ENST00000444664 BAZ1BQ9UIG0 1483 aaKnown RBP31.23■■■□□ 2.59
SHC1-209ENST00000444664 WIZO95785 1651 aa31.18■■■□□ 2.58
SHC1-209ENST00000444664 RSF1Q96T23 1441 aaPredicted RBP31.08■■■□□ 2.57
SHC1-209ENST00000444664 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
SHC1-209ENST00000444664 NESP48681 1621 aa30.77■■■□□ 2.52
SHC1-209ENST00000444664 LAMC3Q9Y6N6 1575 aa30.64■■■□□ 2.5
SHC1-209ENST00000444664 ERCC6Q03468 1493 aa30.59■■■□□ 2.49
SHC1-209ENST00000444664 CADPSQ9ULU8 1353 aa30.52■■■□□ 2.48
SHC1-209ENST00000444664 KIF21AQ7Z4S6 1674 aa30.44■■■□□ 2.46
SHC1-209ENST00000444664 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
SHC1-209ENST00000444664 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
SHC1-209ENST00000444664 CFTRP13569 1480 aa30.35■■■□□ 2.45
SHC1-209ENST00000444664 THOC2Q8NI27 1593 aaKnown RBP30.31■■■□□ 2.44
SHC1-209ENST00000444664 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
SHC1-209ENST00000444664 CUX2O14529 1486 aa30.25■■■□□ 2.43
SHC1-209ENST00000444664 PRDM2Q13029 1718 aa30.23■■■□□ 2.43
SHC1-209ENST00000444664 FANCD2Q9BXW9 1451 aa30.21■■■□□ 2.43
SHC1-209ENST00000444664 CEP164Q9UPV0 1460 aa30.17■■■□□ 2.42
SHC1-209ENST00000444664 MRC2Q9UBG0 1479 aa30.13■■■□□ 2.41
SHC1-209ENST00000444664 WDR62O43379 1518 aa30.04■■■□□ 2.4
SHC1-209ENST00000444664 URB2Q14146 1524 aaKnown RBP29.94■■■□□ 2.38
SHC1-209ENST00000444664 TOPBP1Q92547 1522 aa29.74■■■□□ 2.35
SHC1-209ENST00000444664 DNMBPQ6XZF7 1577 aa29.71■■■□□ 2.35
SHC1-209ENST00000444664 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
SHC1-209ENST00000444664 CUX1P39880 1505 aa29.53■■■□□ 2.32
SHC1-209ENST00000444664 IFT140Q96RY7 1462 aa29.52■■■□□ 2.32
SHC1-209ENST00000444664 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
SHC1-209ENST00000444664 TARBP1Q13395 1621 aaKnown RBP29.44■■■□□ 2.3
SHC1-209ENST00000444664 ZNF608Q9ULD9 1512 aaPredicted RBP29.44■■■□□ 2.3
SHC1-209ENST00000444664 FGD5Q6ZNL6 1462 aa29.42■■■□□ 2.3
SHC1-209ENST00000444664 RAD54L2Q9Y4B4 1467 aa29.37■■■□□ 2.29
SHC1-209ENST00000444664 EIF4G3O43432 1585 aaKnown RBP29.34■■■□□ 2.29
SHC1-209ENST00000444664 SOGA1O94964 1423 aa29.33■■■□□ 2.29
SHC1-209ENST00000444664 DNAJC5Q9H3Z4 198 aa29.3■■■□□ 2.28
SHC1-209ENST00000444664 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
SHC1-209ENST00000444664 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
SHC1-209ENST00000444664 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
SHC1-209ENST00000444664 TOP2BQ02880 1626 aa29.27■■■□□ 2.28
SHC1-209ENST00000444664 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.27
SHC1-209ENST00000444664 WDR97A6NE52 1622 aa29.23■■■□□ 2.27
SHC1-209ENST00000444664 TDRD9Q8NDG6 1382 aaKnown RBP29.19■■■□□ 2.26
SHC1-209ENST00000444664 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
SHC1-209ENST00000444664 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
SHC1-209ENST00000444664 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
SHC1-209ENST00000444664 CHD1O14646 1710 aa29.01■■■□□ 2.23
SHC1-209ENST00000444664 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
SHC1-209ENST00000444664 GRIN2BQ13224 1484 aa29■■■□□ 2.23
SHC1-209ENST00000444664 SNAPC4Q5SXM2 1469 aa29■■■□□ 2.23
SHC1-209ENST00000444664 OSCARQ8IYS5 282 aa28.96■■■□□ 2.23
SHC1-209ENST00000444664 MAGI1Q96QZ7 1491 aaPredicted RBP28.91■■■□□ 2.22
SHC1-209ENST00000444664 FBLN2P98095 1184 aa28.88■■■□□ 2.21
SHC1-209ENST00000444664 SYNJ2O15056 1496 aa28.8■■■□□ 2.2
SHC1-209ENST00000444664 CHMP7Q8WUX9 453 aaPredicted RBP28.77■■■□□ 2.2
SHC1-209ENST00000444664 ADAMTS12P58397 1594 aa28.77■■■□□ 2.2
SHC1-209ENST00000444664 ERICH3Q5RHP9 1530 aa28.76■■■□□ 2.19
SHC1-209ENST00000444664 KIF27Q86VH2 1401 aa28.67■■■□□ 2.18
SHC1-209ENST00000444664 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
SHC1-209ENST00000444664 CLASP1Q7Z460 1538 aa28.64■■■□□ 2.18
SHC1-209ENST00000444664 GRIN2AQ12879 1464 aa28.64■■■□□ 2.18
SHC1-209ENST00000444664 RIMBP3CA6NJZ7 1639 aa28.61■■■□□ 2.17
SHC1-209ENST00000444664 RIMBP3BA6NNM3 1639 aa28.61■■■□□ 2.17
SHC1-209ENST00000444664 RIMBP3Q9UFD9 1639 aa28.61■■■□□ 2.17
SHC1-209ENST00000444664 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
SHC1-209ENST00000444664 ARHGEF11O15085 1522 aa28.57■■■□□ 2.16
SHC1-209ENST00000444664 IGF1RP08069 1367 aa28.56■■■□□ 2.16
SHC1-209ENST00000444664 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
SHC1-209ENST00000444664 CUL7Q14999 1698 aa28.53■■■□□ 2.16
SHC1-209ENST00000444664 NUP160Q12769 1436 aa28.5■■■□□ 2.15
SHC1-209ENST00000444664 RUSC2Q8N2Y8 1516 aa28.5■■■□□ 2.15
SHC1-209ENST00000444664 CARMIL1Q5VZK9 1371 aa28.39■■■□□ 2.14
SHC1-209ENST00000444664 ARAP1Q96P48 1450 aa28.36■■■□□ 2.13
SHC1-209ENST00000444664 SHROOM2Q13796 1616 aa28.33■■■□□ 2.13
SHC1-209ENST00000444664 ERCC6L2Q5T890 1561 aa28.28■■■□□ 2.12
SHC1-209ENST00000444664 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms