RNA–Protein interactions for RNA: ENST00000444536.1

LINC00395-201, long intergenic non-protein coding RNA 395, humanhuman

TSL 3 BASIC

Gene LINC00395, Length 406 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00395-201ENST00000444536 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
LINC00395-201ENST00000444536 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
LINC00395-201ENST00000444536 ABCC9O60706 1549 aa23.83■■□□□ 1.41
LINC00395-201ENST00000444536 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
LINC00395-201ENST00000444536 NACADO15069 1562 aa22.54■■□□□ 1.2
LINC00395-201ENST00000444536 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
LINC00395-201ENST00000444536 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
LINC00395-201ENST00000444536 MYO15BQ96JP2 1530 aa22.25■■□□□ 1.15
LINC00395-201ENST00000444536 DCAF8L2P0C7V8 631 aa22.12■■□□□ 1.13
LINC00395-201ENST00000444536 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
LINC00395-201ENST00000444536 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
LINC00395-201ENST00000444536 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
LINC00395-201ENST00000444536 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
LINC00395-201ENST00000444536 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
LINC00395-201ENST00000444536 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
LINC00395-201ENST00000444536 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
LINC00395-201ENST00000444536 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
LINC00395-201ENST00000444536 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
LINC00395-201ENST00000444536 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
LINC00395-201ENST00000444536 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
LINC00395-201ENST00000444536 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
LINC00395-201ENST00000444536 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
LINC00395-201ENST00000444536 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
LINC00395-201ENST00000444536 CUX2O14529 1486 aa20.61■□□□□ 0.89
LINC00395-201ENST00000444536 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
LINC00395-201ENST00000444536 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
LINC00395-201ENST00000444536 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
LINC00395-201ENST00000444536 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
LINC00395-201ENST00000444536 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
LINC00395-201ENST00000444536 NESP48681 1621 aa20.48■□□□□ 0.87
LINC00395-201ENST00000444536 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
LINC00395-201ENST00000444536 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
LINC00395-201ENST00000444536 LAMC3Q9Y6N6 1575 aa20.36■□□□□ 0.85
LINC00395-201ENST00000444536 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
LINC00395-201ENST00000444536 WIZO95785 1651 aa20.19■□□□□ 0.82
LINC00395-201ENST00000444536 PDS5BQ9NTI5 1447 aa20.15■□□□□ 0.82
LINC00395-201ENST00000444536 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
LINC00395-201ENST00000444536 WDR62O43379 1518 aa20.06■□□□□ 0.8
LINC00395-201ENST00000444536 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
LINC00395-201ENST00000444536 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
LINC00395-201ENST00000444536 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
LINC00395-201ENST00000444536 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
LINC00395-201ENST00000444536 CFTRP13569 1480 aa19.91■□□□□ 0.78
LINC00395-201ENST00000444536 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
LINC00395-201ENST00000444536 PRDM2Q13029 1718 aa19.83■□□□□ 0.77
LINC00395-201ENST00000444536 URB2Q14146 1524 aaKnown RBP19.79■□□□□ 0.76
LINC00395-201ENST00000444536 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
LINC00395-201ENST00000444536 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
LINC00395-201ENST00000444536 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
LINC00395-201ENST00000444536 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
LINC00395-201ENST00000444536 ZNF608Q9ULD9 1512 aaPredicted RBP19.53■□□□□ 0.72
LINC00395-201ENST00000444536 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
LINC00395-201ENST00000444536 EIF4G3O43432 1585 aaKnown RBP19.49■□□□□ 0.71
LINC00395-201ENST00000444536 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
LINC00395-201ENST00000444536 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
LINC00395-201ENST00000444536 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
LINC00395-201ENST00000444536 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
LINC00395-201ENST00000444536 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
LINC00395-201ENST00000444536 TARBP1Q13395 1621 aaKnown RBP19.43■□□□□ 0.7
LINC00395-201ENST00000444536 CHD1O14646 1710 aa19.36■□□□□ 0.69
LINC00395-201ENST00000444536 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
LINC00395-201ENST00000444536 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
LINC00395-201ENST00000444536 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
LINC00395-201ENST00000444536 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
LINC00395-201ENST00000444536 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
LINC00395-201ENST00000444536 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
LINC00395-201ENST00000444536 CUX1P39880 1505 aa19.2■□□□□ 0.66
LINC00395-201ENST00000444536 SOGA1O94964 1423 aa19.17■□□□□ 0.66
LINC00395-201ENST00000444536 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
LINC00395-201ENST00000444536 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
LINC00395-201ENST00000444536 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
LINC00395-201ENST00000444536 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
LINC00395-201ENST00000444536 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
LINC00395-201ENST00000444536 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
LINC00395-201ENST00000444536 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
LINC00395-201ENST00000444536 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
LINC00395-201ENST00000444536 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
LINC00395-201ENST00000444536 FBLN2P98095 1184 aa19.04■□□□□ 0.64
LINC00395-201ENST00000444536 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
LINC00395-201ENST00000444536 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
LINC00395-201ENST00000444536 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
LINC00395-201ENST00000444536 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
LINC00395-201ENST00000444536 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
LINC00395-201ENST00000444536 CHMP7Q8WUX9 453 aaPredicted RBP18.92■□□□□ 0.62
LINC00395-201ENST00000444536 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
LINC00395-201ENST00000444536 TOP2BQ02880 1626 aa18.89■□□□□ 0.61
LINC00395-201ENST00000444536 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
LINC00395-201ENST00000444536 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.6
LINC00395-201ENST00000444536 CEP170Q5SW79 1584 aa18.83■□□□□ 0.6
LINC00395-201ENST00000444536 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.6
LINC00395-201ENST00000444536 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
LINC00395-201ENST00000444536 NUP160Q12769 1436 aa18.81■□□□□ 0.6
LINC00395-201ENST00000444536 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
LINC00395-201ENST00000444536 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
LINC00395-201ENST00000444536 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
LINC00395-201ENST00000444536 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
LINC00395-201ENST00000444536 RUSC2Q8N2Y8 1516 aa18.65■□□□□ 0.58
LINC00395-201ENST00000444536 KIF13AQ9H1H9 1805 aa18.56■□□□□ 0.56
LINC00395-201ENST00000444536 PRG4Q92954 1404 aaPredicted RBP18.54■□□□□ 0.56
LINC00395-201ENST00000444536 CUL7Q14999 1698 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms