RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 NISCHQ9Y2I1 1504 aa42.19■■■■■ 4.34
SMARCAL1-209ENST00000444508 CCDC180Q9P1Z9 1646 aa37.51■■■■□ 3.6
SMARCAL1-209ENST00000444508 ABCC9O60706 1549 aa36.62■■■■□ 3.45
SMARCAL1-209ENST00000444508 RB1CC1Q8TDY2 1594 aa35.28■■■■□ 3.24
SMARCAL1-209ENST00000444508 DCAF8L2P0C7V8 631 aa35.26■■■■□ 3.24
SMARCAL1-209ENST00000444508 NACADO15069 1562 aa35.24■■■■□ 3.23
SMARCAL1-209ENST00000444508 ZCCHC6Q5VYS8 1495 aaKnown RBP35.16■■■■□ 3.22
SMARCAL1-209ENST00000444508 MYO15BQ96JP2 1530 aa35.03■■■■□ 3.2
SMARCAL1-209ENST00000444508 DCAF1Q9Y4B6 1507 aa34.91■■■■□ 3.18
SMARCAL1-209ENST00000444508 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
SMARCAL1-209ENST00000444508 SCRIBQ14160 1630 aa34.23■■■■□ 3.07
SMARCAL1-209ENST00000444508 PABPN1Q86U42 306 aaKnown RBP eCLIP34.21■■■■□ 3.07
SMARCAL1-209ENST00000444508 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
SMARCAL1-209ENST00000444508 SHROOM4Q9ULL8 1493 aa33.85■■■■□ 3.01
SMARCAL1-209ENST00000444508 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
SMARCAL1-209ENST00000444508 EIF4G1Q04637 1599 aaKnown RBP33.27■■■□□ 2.92
SMARCAL1-209ENST00000444508 CC2D2AQ9P2K1 1620 aa33.12■■■□□ 2.89
SMARCAL1-209ENST00000444508 CECR2Q9BXF3 1484 aa32.9■■■□□ 2.86
SMARCAL1-209ENST00000444508 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
SMARCAL1-209ENST00000444508 BAZ1AQ9NRL2 1556 aaPredicted RBP32.72■■■□□ 2.83
SMARCAL1-209ENST00000444508 ATAD2BQ9ULI0 1458 aa32.52■■■□□ 2.8
SMARCAL1-209ENST00000444508 SMARCA2P51531 1590 aa32.52■■■□□ 2.8
SMARCAL1-209ENST00000444508 MROH2BQ7Z745 1585 aa32.5■■■□□ 2.79
SMARCAL1-209ENST00000444508 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
SMARCAL1-209ENST00000444508 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
SMARCAL1-209ENST00000444508 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
SMARCAL1-209ENST00000444508 BAZ1BQ9UIG0 1483 aaKnown RBP32.29■■■□□ 2.76
SMARCAL1-209ENST00000444508 WIZO95785 1651 aa32.17■■■□□ 2.74
SMARCAL1-209ENST00000444508 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
SMARCAL1-209ENST00000444508 TOP2AP11388 1531 aaKnown RBP31.85■■■□□ 2.69
SMARCAL1-209ENST00000444508 NESP48681 1621 aa31.68■■■□□ 2.66
SMARCAL1-209ENST00000444508 LAMC3Q9Y6N6 1575 aa31.65■■■□□ 2.66
SMARCAL1-209ENST00000444508 ERCC6Q03468 1493 aa31.6■■■□□ 2.65
SMARCAL1-209ENST00000444508 CADPSQ9ULU8 1353 aa31.56■■■□□ 2.64
SMARCAL1-209ENST00000444508 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
SMARCAL1-209ENST00000444508 CCDC88BA6NC98 1476 aa31.45■■■□□ 2.62
SMARCAL1-209ENST00000444508 SUPT5HO00267 1087 aaKnown RBP31.43■■■□□ 2.62
SMARCAL1-209ENST00000444508 CFTRP13569 1480 aa31.38■■■□□ 2.61
SMARCAL1-209ENST00000444508 KIF21AQ7Z4S6 1674 aa31.35■■■□□ 2.61
SMARCAL1-209ENST00000444508 THOC2Q8NI27 1593 aaKnown RBP31.21■■■□□ 2.59
SMARCAL1-209ENST00000444508 CUX2O14529 1486 aa31.21■■■□□ 2.59
SMARCAL1-209ENST00000444508 FANCD2Q9BXW9 1451 aa31.21■■■□□ 2.59
SMARCAL1-209ENST00000444508 PRDM2Q13029 1718 aa31.19■■■□□ 2.58
SMARCAL1-209ENST00000444508 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
SMARCAL1-209ENST00000444508 MRC2Q9UBG0 1479 aa31.11■■■□□ 2.57
SMARCAL1-209ENST00000444508 WDR62O43379 1518 aa30.99■■■□□ 2.55
SMARCAL1-209ENST00000444508 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
SMARCAL1-209ENST00000444508 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
SMARCAL1-209ENST00000444508 TOPBP1Q92547 1522 aa30.71■■■□□ 2.51
SMARCAL1-209ENST00000444508 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.5
SMARCAL1-209ENST00000444508 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
SMARCAL1-209ENST00000444508 CUX1P39880 1505 aa30.49■■■□□ 2.47
SMARCAL1-209ENST00000444508 POLA1P09884 1462 aaPredicted RBP30.45■■■□□ 2.47
SMARCAL1-209ENST00000444508 FGD5Q6ZNL6 1462 aa30.4■■■□□ 2.46
SMARCAL1-209ENST00000444508 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
SMARCAL1-209ENST00000444508 WRNQ14191 1432 aaPredicted RBP eCLIP30.35■■■□□ 2.45
SMARCAL1-209ENST00000444508 ZNF608Q9ULD9 1512 aaPredicted RBP30.34■■■□□ 2.45
SMARCAL1-209ENST00000444508 SOGA1O94964 1423 aa30.33■■■□□ 2.45
SMARCAL1-209ENST00000444508 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
SMARCAL1-209ENST00000444508 TOP2BQ02880 1626 aa30.27■■■□□ 2.44
SMARCAL1-209ENST00000444508 BIVM-ERCC5R4GMW8 1640 aa30.26■■■□□ 2.44
SMARCAL1-209ENST00000444508 EIF4G3O43432 1585 aaKnown RBP30.26■■■□□ 2.43
SMARCAL1-209ENST00000444508 SYNJ1O43426 1573 aa30.25■■■□□ 2.43
SMARCAL1-209ENST00000444508 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.42
SMARCAL1-209ENST00000444508 WDR97A6NE52 1622 aa30.16■■■□□ 2.42
SMARCAL1-209ENST00000444508 DNAJC5Q9H3Z4 198 aa30.15■■■□□ 2.42
SMARCAL1-209ENST00000444508 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
SMARCAL1-209ENST00000444508 ABCA10Q8WWZ4 1543 aa30.1■■■□□ 2.41
SMARCAL1-209ENST00000444508 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
SMARCAL1-209ENST00000444508 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
SMARCAL1-209ENST00000444508 ABCA5Q8WWZ7 1642 aa29.97■■■□□ 2.39
SMARCAL1-209ENST00000444508 OSCARQ8IYS5 282 aa29.94■■■□□ 2.38
SMARCAL1-209ENST00000444508 PBRM1Q86U86 1689 aa29.94■■■□□ 2.38
SMARCAL1-209ENST00000444508 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
SMARCAL1-209ENST00000444508 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
SMARCAL1-209ENST00000444508 CHD1O14646 1710 aa29.87■■■□□ 2.37
SMARCAL1-209ENST00000444508 FBLN2P98095 1184 aa29.86■■■□□ 2.37
SMARCAL1-209ENST00000444508 CHMP7Q8WUX9 453 aaPredicted RBP29.79■■■□□ 2.36
SMARCAL1-209ENST00000444508 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
SMARCAL1-209ENST00000444508 ERICH3Q5RHP9 1530 aa29.76■■■□□ 2.35
SMARCAL1-209ENST00000444508 KIF27Q86VH2 1401 aa29.72■■■□□ 2.35
SMARCAL1-209ENST00000444508 TRIM41Q8WV44 630 aa29.7■■■□□ 2.35
SMARCAL1-209ENST00000444508 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
SMARCAL1-209ENST00000444508 FHAD1B1AJZ9 1412 aa29.65■■■□□ 2.34
SMARCAL1-209ENST00000444508 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
SMARCAL1-209ENST00000444508 IGF1RP08069 1367 aa29.54■■■□□ 2.32
SMARCAL1-209ENST00000444508 CLASP1Q7Z460 1538 aa29.52■■■□□ 2.32
SMARCAL1-209ENST00000444508 CUL7Q14999 1698 aa29.52■■■□□ 2.32
SMARCAL1-209ENST00000444508 RIMBP3CA6NJZ7 1639 aa29.44■■■□□ 2.3
SMARCAL1-209ENST00000444508 RIMBP3BA6NNM3 1639 aa29.44■■■□□ 2.3
SMARCAL1-209ENST00000444508 RIMBP3Q9UFD9 1639 aa29.44■■■□□ 2.3
SMARCAL1-209ENST00000444508 ARHGEF11O15085 1522 aa29.44■■■□□ 2.3
SMARCAL1-209ENST00000444508 NUP160Q12769 1436 aa29.44■■■□□ 2.3
SMARCAL1-209ENST00000444508 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
SMARCAL1-209ENST00000444508 RUSC2Q8N2Y8 1516 aa29.41■■■□□ 2.3
SMARCAL1-209ENST00000444508 CARMIL1Q5VZK9 1371 aa29.4■■■□□ 2.3
SMARCAL1-209ENST00000444508 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
SMARCAL1-209ENST00000444508 RAPGEF2Q9Y4G8 1499 aa29.24■■■□□ 2.27
SMARCAL1-209ENST00000444508 SHROOM2Q13796 1616 aa29.22■■■□□ 2.27
SMARCAL1-209ENST00000444508 EEA1Q15075 1411 aa29.2■■■□□ 2.26
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