RNA–Protein interactions for RNA: ENST00000444282.5

KATNA1-205, Transcript of katanin catalytic subunit A1, humanhuman

TSL 3

Gene KATNA1, Length 1,138 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-205ENST00000444282 NISCHQ9Y2I1 1504 aa41.46■■■■■ 4.23
KATNA1-205ENST00000444282 CCDC180Q9P1Z9 1646 aa37.17■■■■□ 3.54
KATNA1-205ENST00000444282 ABCC9O60706 1549 aa37.03■■■■□ 3.52
KATNA1-205ENST00000444282 RB1CC1Q8TDY2 1594 aa35.34■■■■□ 3.25
KATNA1-205ENST00000444282 NACADO15069 1562 aa35.14■■■■□ 3.22
KATNA1-205ENST00000444282 DCAF8L2P0C7V8 631 aa34.9■■■■□ 3.18
KATNA1-205ENST00000444282 MYO15BQ96JP2 1530 aa34.73■■■■□ 3.15
KATNA1-205ENST00000444282 DNAJC5BQ9UF47 199 aa34.65■■■■□ 3.14
KATNA1-205ENST00000444282 PABPN1Q86U42 306 aaKnown RBP eCLIP34.49■■■■□ 3.11
KATNA1-205ENST00000444282 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
KATNA1-205ENST00000444282 ZCCHC6Q5VYS8 1495 aaKnown RBP34.38■■■■□ 3.09
KATNA1-205ENST00000444282 DCAF1Q9Y4B6 1507 aa34.3■■■■□ 3.08
KATNA1-205ENST00000444282 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
KATNA1-205ENST00000444282 SHROOM4Q9ULL8 1493 aa33.93■■■■□ 3.02
KATNA1-205ENST00000444282 SCRIBQ14160 1630 aa33.81■■■■□ 3
KATNA1-205ENST00000444282 CC2D2AQ9P2K1 1620 aa33.47■■■□□ 2.95
KATNA1-205ENST00000444282 EIF4G1Q04637 1599 aaKnown RBP33.43■■■□□ 2.94
KATNA1-205ENST00000444282 CECR2Q9BXF3 1484 aa33.38■■■□□ 2.93
KATNA1-205ENST00000444282 NCAPD3P42695 1498 aa32.45■■■□□ 2.79
KATNA1-205ENST00000444282 ATAD2BQ9ULI0 1458 aa32.33■■■□□ 2.77
KATNA1-205ENST00000444282 SMARCA4P51532 1647 aa32.3■■■□□ 2.76
KATNA1-205ENST00000444282 SMARCA2P51531 1590 aa32.27■■■□□ 2.76
KATNA1-205ENST00000444282 HMGXB3Q12766 1538 aa32.2■■■□□ 2.74
KATNA1-205ENST00000444282 BAZ1AQ9NRL2 1556 aaPredicted RBP32.19■■■□□ 2.74
KATNA1-205ENST00000444282 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
KATNA1-205ENST00000444282 BAZ1BQ9UIG0 1483 aaKnown RBP32.02■■■□□ 2.72
KATNA1-205ENST00000444282 ERCC6Q03468 1493 aa32■■■□□ 2.71
KATNA1-205ENST00000444282 CUX2O14529 1486 aa31.95■■■□□ 2.7
KATNA1-205ENST00000444282 MROH2BQ7Z745 1585 aa31.92■■■□□ 2.7
KATNA1-205ENST00000444282 NESP48681 1621 aa31.82■■■□□ 2.69
KATNA1-205ENST00000444282 DNAJC5Q9H3Z4 198 aa31.81■■■□□ 2.68
KATNA1-205ENST00000444282 LAMC3Q9Y6N6 1575 aa31.68■■■□□ 2.66
KATNA1-205ENST00000444282 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
KATNA1-205ENST00000444282 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.63
KATNA1-205ENST00000444282 WIZO95785 1651 aa31.51■■■□□ 2.63
KATNA1-205ENST00000444282 CADPSQ9ULU8 1353 aa31.45■■■□□ 2.63
KATNA1-205ENST00000444282 KIF21AQ7Z4S6 1674 aa31.4■■■□□ 2.62
KATNA1-205ENST00000444282 RSF1Q96T23 1441 aaPredicted RBP31.32■■■□□ 2.6
KATNA1-205ENST00000444282 MRC2Q9UBG0 1479 aa31.21■■■□□ 2.59
KATNA1-205ENST00000444282 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
KATNA1-205ENST00000444282 WDR62O43379 1518 aa31.13■■■□□ 2.57
KATNA1-205ENST00000444282 CFTRP13569 1480 aa31.12■■■□□ 2.57
KATNA1-205ENST00000444282 CEP164Q9UPV0 1460 aa31.11■■■□□ 2.57
KATNA1-205ENST00000444282 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
KATNA1-205ENST00000444282 CCDC88BA6NC98 1476 aa30.81■■■□□ 2.52
KATNA1-205ENST00000444282 URB2Q14146 1524 aaKnown RBP30.8■■■□□ 2.52
KATNA1-205ENST00000444282 PRDM2Q13029 1718 aa30.76■■■□□ 2.51
KATNA1-205ENST00000444282 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
KATNA1-205ENST00000444282 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
KATNA1-205ENST00000444282 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
KATNA1-205ENST00000444282 TOPBP1Q92547 1522 aa30.49■■■□□ 2.47
KATNA1-205ENST00000444282 ZNF608Q9ULD9 1512 aaPredicted RBP30.39■■■□□ 2.46
KATNA1-205ENST00000444282 TRIM41Q8WV44 630 aa30.39■■■□□ 2.46
KATNA1-205ENST00000444282 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
KATNA1-205ENST00000444282 EIF4G3O43432 1585 aaKnown RBP30.23■■■□□ 2.43
KATNA1-205ENST00000444282 TARBP1Q13395 1621 aaKnown RBP30.2■■■□□ 2.43
KATNA1-205ENST00000444282 POLA1P09884 1462 aaPredicted RBP30.19■■■□□ 2.42
KATNA1-205ENST00000444282 AQRO60306 1485 aaKnown RBP eCLIP30.13■■■□□ 2.414e-6■□□□□ 10.8
KATNA1-205ENST00000444282 SOGA1O94964 1423 aa30.06■■■□□ 2.4
KATNA1-205ENST00000444282 RAD54L2Q9Y4B4 1467 aa30.05■■■□□ 2.4
KATNA1-205ENST00000444282 RIMBP3CA6NJZ7 1639 aa30.04■■■□□ 2.4
KATNA1-205ENST00000444282 RIMBP3BA6NNM3 1639 aa30.04■■■□□ 2.4
KATNA1-205ENST00000444282 RIMBP3Q9UFD9 1639 aa30.04■■■□□ 2.4
KATNA1-205ENST00000444282 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
KATNA1-205ENST00000444282 CUX1P39880 1505 aa29.99■■■□□ 2.39
KATNA1-205ENST00000444282 ARHGEF11O15085 1522 aa29.97■■■□□ 2.39
KATNA1-205ENST00000444282 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
KATNA1-205ENST00000444282 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
KATNA1-205ENST00000444282 CHD1O14646 1710 aa29.96■■■□□ 2.39
KATNA1-205ENST00000444282 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
KATNA1-205ENST00000444282 FBLN2P98095 1184 aa29.92■■■□□ 2.38
KATNA1-205ENST00000444282 SNAPC4Q5SXM2 1469 aa29.84■■■□□ 2.37
KATNA1-205ENST00000444282 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
KATNA1-205ENST00000444282 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
KATNA1-205ENST00000444282 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
KATNA1-205ENST00000444282 CYB5RLQ6IPT4 315 aa29.74■■■□□ 2.35
KATNA1-205ENST00000444282 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
KATNA1-205ENST00000444282 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.34
KATNA1-205ENST00000444282 SYNJ2O15056 1496 aa29.69■■■□□ 2.34
KATNA1-205ENST00000444282 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
KATNA1-205ENST00000444282 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
KATNA1-205ENST00000444282 CLASP1Q7Z460 1538 aa29.66■■■□□ 2.34
KATNA1-205ENST00000444282 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
KATNA1-205ENST00000444282 ABCA5Q8WWZ7 1642 aa29.62■■■□□ 2.33
KATNA1-205ENST00000444282 WRNQ14191 1432 aaPredicted RBP eCLIP29.61■■■□□ 2.33
KATNA1-205ENST00000444282 TOP2BQ02880 1626 aa29.55■■■□□ 2.32
KATNA1-205ENST00000444282 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
KATNA1-205ENST00000444282 GRIN2AQ12879 1464 aa29.41■■■□□ 2.3
KATNA1-205ENST00000444282 ADAMTS12P58397 1594 aa29.39■■■□□ 2.29
KATNA1-205ENST00000444282 TRHP20396 242 aaPredicted RBP29.38■■■□□ 2.29
KATNA1-205ENST00000444282 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
KATNA1-205ENST00000444282 ERICH3Q5RHP9 1530 aa29.33■■■□□ 2.29
KATNA1-205ENST00000444282 NUP160Q12769 1436 aa29.32■■■□□ 2.28
KATNA1-205ENST00000444282 CEP170Q5SW79 1584 aa29.26■■■□□ 2.28
KATNA1-205ENST00000444282 ERCC6L2Q5T890 1561 aa29.17■■■□□ 2.26
KATNA1-205ENST00000444282 SHROOM2Q13796 1616 aa29.16■■■□□ 2.26
KATNA1-205ENST00000444282 JPH4Q96JJ6 628 aa29.02■■■□□ 2.24
KATNA1-205ENST00000444282 PRG4Q92954 1404 aaPredicted RBP29.01■■■□□ 2.23
KATNA1-205ENST00000444282 KIF27Q86VH2 1401 aa29■■■□□ 2.23
KATNA1-205ENST00000444282 IGF1RP08069 1367 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms