RNA–Protein interactions for RNA: ENST00000444219.2

AL121956.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL121956.1, Length 1,548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL121956.1-201ENST00000444219 NISCHQ9Y2I1 1504 aa27.07■■□□□ 1.92
AL121956.1-201ENST00000444219 CCDC180Q9P1Z9 1646 aa24.11■■□□□ 1.45
AL121956.1-201ENST00000444219 ABCC9O60706 1549 aa23.57■■□□□ 1.36
AL121956.1-201ENST00000444219 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
AL121956.1-201ENST00000444219 NACADO15069 1562 aa22.6■■□□□ 1.21
AL121956.1-201ENST00000444219 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
AL121956.1-201ENST00000444219 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
AL121956.1-201ENST00000444219 MYO15BQ96JP2 1530 aa22.42■■□□□ 1.18
AL121956.1-201ENST00000444219 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
AL121956.1-201ENST00000444219 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
AL121956.1-201ENST00000444219 SCRIBQ14160 1630 aa22.05■■□□□ 1.12
AL121956.1-201ENST00000444219 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
AL121956.1-201ENST00000444219 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
AL121956.1-201ENST00000444219 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
AL121956.1-201ENST00000444219 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
AL121956.1-201ENST00000444219 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
AL121956.1-201ENST00000444219 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
AL121956.1-201ENST00000444219 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
AL121956.1-201ENST00000444219 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
AL121956.1-201ENST00000444219 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
AL121956.1-201ENST00000444219 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
AL121956.1-201ENST00000444219 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
AL121956.1-201ENST00000444219 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
AL121956.1-201ENST00000444219 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
AL121956.1-201ENST00000444219 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
AL121956.1-201ENST00000444219 NCAPD3P42695 1498 aa20.83■□□□□ 0.92
AL121956.1-201ENST00000444219 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
AL121956.1-201ENST00000444219 HMGXB3Q12766 1538 aa20.77■□□□□ 0.92
AL121956.1-201ENST00000444219 WIZO95785 1651 aa20.73■□□□□ 0.91
AL121956.1-201ENST00000444219 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
AL121956.1-201ENST00000444219 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
AL121956.1-201ENST00000444219 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
AL121956.1-201ENST00000444219 NESP48681 1621 aa20.43■□□□□ 0.86
AL121956.1-201ENST00000444219 LAMC3Q9Y6N6 1575 aa20.32■□□□□ 0.84
AL121956.1-201ENST00000444219 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
AL121956.1-201ENST00000444219 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
AL121956.1-201ENST00000444219 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
AL121956.1-201ENST00000444219 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
AL121956.1-201ENST00000444219 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
AL121956.1-201ENST00000444219 CFTRP13569 1480 aa20.13■□□□□ 0.81
AL121956.1-201ENST00000444219 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
AL121956.1-201ENST00000444219 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
AL121956.1-201ENST00000444219 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
AL121956.1-201ENST00000444219 CUX2O14529 1486 aa20.03■□□□□ 0.8
AL121956.1-201ENST00000444219 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
AL121956.1-201ENST00000444219 CEP164Q9UPV0 1460 aa20■□□□□ 0.79
AL121956.1-201ENST00000444219 MRC2Q9UBG0 1479 aa19.97■□□□□ 0.79
AL121956.1-201ENST00000444219 WDR62O43379 1518 aa19.94■□□□□ 0.78
AL121956.1-201ENST00000444219 URB2Q14146 1524 aaKnown RBP19.87■□□□□ 0.77
AL121956.1-201ENST00000444219 TOPBP1Q92547 1522 aa19.73■□□□□ 0.75
AL121956.1-201ENST00000444219 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
AL121956.1-201ENST00000444219 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
AL121956.1-201ENST00000444219 CUX1P39880 1505 aa19.61■□□□□ 0.73
AL121956.1-201ENST00000444219 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
AL121956.1-201ENST00000444219 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
AL121956.1-201ENST00000444219 TARBP1Q13395 1621 aaKnown RBP19.56■□□□□ 0.72
AL121956.1-201ENST00000444219 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
AL121956.1-201ENST00000444219 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
AL121956.1-201ENST00000444219 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
AL121956.1-201ENST00000444219 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
AL121956.1-201ENST00000444219 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
AL121956.1-201ENST00000444219 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
AL121956.1-201ENST00000444219 WDR97A6NE52 1622 aa19.45■□□□□ 0.7
AL121956.1-201ENST00000444219 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
AL121956.1-201ENST00000444219 SOGA1O94964 1423 aa19.43■□□□□ 0.7
AL121956.1-201ENST00000444219 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
AL121956.1-201ENST00000444219 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.7
AL121956.1-201ENST00000444219 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
AL121956.1-201ENST00000444219 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
AL121956.1-201ENST00000444219 PBRM1Q86U86 1689 aa19.32■□□□□ 0.68
AL121956.1-201ENST00000444219 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
AL121956.1-201ENST00000444219 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
AL121956.1-201ENST00000444219 CHD1O14646 1710 aa19.3■□□□□ 0.68
AL121956.1-201ENST00000444219 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
AL121956.1-201ENST00000444219 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
AL121956.1-201ENST00000444219 GRIN2BQ13224 1484 aa19.21■□□□□ 0.67
AL121956.1-201ENST00000444219 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
AL121956.1-201ENST00000444219 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
AL121956.1-201ENST00000444219 FBLN2P98095 1184 aa19.12■□□□□ 0.65
AL121956.1-201ENST00000444219 ADAMTS12P58397 1594 aa19.11■□□□□ 0.65
AL121956.1-201ENST00000444219 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
AL121956.1-201ENST00000444219 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
AL121956.1-201ENST00000444219 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
AL121956.1-201ENST00000444219 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
AL121956.1-201ENST00000444219 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
AL121956.1-201ENST00000444219 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
AL121956.1-201ENST00000444219 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
AL121956.1-201ENST00000444219 GRIN2AQ12879 1464 aa19■□□□□ 0.63
AL121956.1-201ENST00000444219 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
AL121956.1-201ENST00000444219 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
AL121956.1-201ENST00000444219 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
AL121956.1-201ENST00000444219 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
AL121956.1-201ENST00000444219 CUL7Q14999 1698 aa18.95■□□□□ 0.62
AL121956.1-201ENST00000444219 RUSC2Q8N2Y8 1516 aa18.94■□□□□ 0.62
AL121956.1-201ENST00000444219 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
AL121956.1-201ENST00000444219 IGF1RP08069 1367 aa18.92■□□□□ 0.62
AL121956.1-201ENST00000444219 NUP160Q12769 1436 aa18.9■□□□□ 0.62
AL121956.1-201ENST00000444219 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
AL121956.1-201ENST00000444219 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
AL121956.1-201ENST00000444219 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms