RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
COMMD1-203ENST00000444166 ABCC9O60706 1549 aa24.04■■□□□ 1.44
COMMD1-203ENST00000444166 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
COMMD1-203ENST00000444166 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
COMMD1-203ENST00000444166 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
COMMD1-203ENST00000444166 NACADO15069 1562 aa22.43■■□□□ 1.18
COMMD1-203ENST00000444166 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
COMMD1-203ENST00000444166 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
COMMD1-203ENST00000444166 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
COMMD1-203ENST00000444166 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
COMMD1-203ENST00000444166 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
COMMD1-203ENST00000444166 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
COMMD1-203ENST00000444166 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
COMMD1-203ENST00000444166 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
COMMD1-203ENST00000444166 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
COMMD1-203ENST00000444166 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
COMMD1-203ENST00000444166 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
COMMD1-203ENST00000444166 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
COMMD1-203ENST00000444166 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
COMMD1-203ENST00000444166 CUX2O14529 1486 aa20.94■□□□□ 0.94
COMMD1-203ENST00000444166 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
COMMD1-203ENST00000444166 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
COMMD1-203ENST00000444166 ATAD2BQ9ULI0 1458 aa20.61■□□□□ 0.89
COMMD1-203ENST00000444166 HMGXB3Q12766 1538 aa20.54■□□□□ 0.88
COMMD1-203ENST00000444166 NESP48681 1621 aa20.53■□□□□ 0.88
COMMD1-203ENST00000444166 SMARCA2P51531 1590 aa20.5■□□□□ 0.87
COMMD1-203ENST00000444166 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
COMMD1-203ENST00000444166 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
COMMD1-203ENST00000444166 BAZ1BQ9UIG0 1483 aaKnown RBP20.34■□□□□ 0.85
COMMD1-203ENST00000444166 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
COMMD1-203ENST00000444166 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
COMMD1-203ENST00000444166 BAZ1AQ9NRL2 1556 aaPredicted RBP20.27■□□□□ 0.84
COMMD1-203ENST00000444166 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
COMMD1-203ENST00000444166 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
COMMD1-203ENST00000444166 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
COMMD1-203ENST00000444166 MROH2BQ7Z745 1585 aa20.1■□□□□ 0.81
COMMD1-203ENST00000444166 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
COMMD1-203ENST00000444166 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
COMMD1-203ENST00000444166 WDR62O43379 1518 aa20.06■□□□□ 0.8
COMMD1-203ENST00000444166 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
COMMD1-203ENST00000444166 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
COMMD1-203ENST00000444166 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.76
COMMD1-203ENST00000444166 WIZO95785 1651 aa19.81■□□□□ 0.76
COMMD1-203ENST00000444166 CFTRP13569 1480 aa19.76■□□□□ 0.75
COMMD1-203ENST00000444166 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
COMMD1-203ENST00000444166 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
COMMD1-203ENST00000444166 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
COMMD1-203ENST00000444166 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
COMMD1-203ENST00000444166 ARHGEF11O15085 1522 aa19.58■□□□□ 0.73
COMMD1-203ENST00000444166 TOP2AP11388 1531 aaKnown RBP19.55■□□□□ 0.72
COMMD1-203ENST00000444166 ZNF608Q9ULD9 1512 aaPredicted RBP19.55■□□□□ 0.72
COMMD1-203ENST00000444166 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.72
COMMD1-203ENST00000444166 IFT140Q96RY7 1462 aa19.52■□□□□ 0.72
COMMD1-203ENST00000444166 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
COMMD1-203ENST00000444166 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
COMMD1-203ENST00000444166 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
COMMD1-203ENST00000444166 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
COMMD1-203ENST00000444166 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
COMMD1-203ENST00000444166 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
COMMD1-203ENST00000444166 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
COMMD1-203ENST00000444166 CHD1O14646 1710 aa19.31■□□□□ 0.68
COMMD1-203ENST00000444166 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
COMMD1-203ENST00000444166 AQRO60306 1485 aaKnown RBP eCLIP19.29■□□□□ 0.68
COMMD1-203ENST00000444166 DNMBPQ6XZF7 1577 aa19.29■□□□□ 0.68
COMMD1-203ENST00000444166 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
COMMD1-203ENST00000444166 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
COMMD1-203ENST00000444166 FBLN2P98095 1184 aa19.18■□□□□ 0.66
COMMD1-203ENST00000444166 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
COMMD1-203ENST00000444166 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
COMMD1-203ENST00000444166 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
COMMD1-203ENST00000444166 SNAPC4Q5SXM2 1469 aa19.08■□□□□ 0.64
COMMD1-203ENST00000444166 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
COMMD1-203ENST00000444166 SOGA1O94964 1423 aa19.06■□□□□ 0.64
COMMD1-203ENST00000444166 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
COMMD1-203ENST00000444166 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
COMMD1-203ENST00000444166 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
COMMD1-203ENST00000444166 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
COMMD1-203ENST00000444166 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
COMMD1-203ENST00000444166 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
COMMD1-203ENST00000444166 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
COMMD1-203ENST00000444166 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
COMMD1-203ENST00000444166 CUX1P39880 1505 aa18.91■□□□□ 0.62
COMMD1-203ENST00000444166 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
COMMD1-203ENST00000444166 ERCC6L2Q5T890 1561 aa18.79■□□□□ 0.6
COMMD1-203ENST00000444166 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
COMMD1-203ENST00000444166 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
COMMD1-203ENST00000444166 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
COMMD1-203ENST00000444166 NUP160Q12769 1436 aa18.72■□□□□ 0.59
COMMD1-203ENST00000444166 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
COMMD1-203ENST00000444166 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
COMMD1-203ENST00000444166 ADAMTS12P58397 1594 aa18.66■□□□□ 0.58
COMMD1-203ENST00000444166 KIF13AQ9H1H9 1805 aa18.65■□□□□ 0.58
COMMD1-203ENST00000444166 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.57
COMMD1-203ENST00000444166 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
COMMD1-203ENST00000444166 ABCC10Q5T3U5 1492 aa18.52■□□□□ 0.56
COMMD1-203ENST00000444166 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.56
COMMD1-203ENST00000444166 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
COMMD1-203ENST00000444166 TOP2BQ02880 1626 aa18.48■□□□□ 0.55
COMMD1-203ENST00000444166 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
COMMD1-203ENST00000444166 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms