RNA–Protein interactions for RNA: ENST00000444029.5

PARVB-205, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-205ENST00000444029 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
PARVB-205ENST00000444029 ABCC9O60706 1549 aa24.31■■□□□ 1.48
PARVB-205ENST00000444029 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
PARVB-205ENST00000444029 CCDC180Q9P1Z9 1646 aa23.1■■□□□ 1.29
PARVB-205ENST00000444029 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
PARVB-205ENST00000444029 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
PARVB-205ENST00000444029 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
PARVB-205ENST00000444029 NACADO15069 1562 aa22.17■■□□□ 1.14
PARVB-205ENST00000444029 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
PARVB-205ENST00000444029 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
PARVB-205ENST00000444029 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
PARVB-205ENST00000444029 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
PARVB-205ENST00000444029 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
PARVB-205ENST00000444029 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
PARVB-205ENST00000444029 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
PARVB-205ENST00000444029 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
PARVB-205ENST00000444029 SCRIBQ14160 1630 aa21.31■■□□□ 1
PARVB-205ENST00000444029 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
PARVB-205ENST00000444029 CUX2O14529 1486 aa21.06■□□□□ 0.96
PARVB-205ENST00000444029 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
PARVB-205ENST00000444029 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
PARVB-205ENST00000444029 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
PARVB-205ENST00000444029 NESP48681 1621 aa20.63■□□□□ 0.89
PARVB-205ENST00000444029 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
PARVB-205ENST00000444029 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
PARVB-205ENST00000444029 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
PARVB-205ENST00000444029 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
PARVB-205ENST00000444029 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
PARVB-205ENST00000444029 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
PARVB-205ENST00000444029 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
PARVB-205ENST00000444029 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
PARVB-205ENST00000444029 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
PARVB-205ENST00000444029 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
PARVB-205ENST00000444029 SMARCA4P51532 1647 aa20.12■□□□□ 0.81
PARVB-205ENST00000444029 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
PARVB-205ENST00000444029 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
PARVB-205ENST00000444029 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
PARVB-205ENST00000444029 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
PARVB-205ENST00000444029 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
PARVB-205ENST00000444029 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
PARVB-205ENST00000444029 WDR62O43379 1518 aa19.91■□□□□ 0.78
PARVB-205ENST00000444029 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
PARVB-205ENST00000444029 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
PARVB-205ENST00000444029 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
PARVB-205ENST00000444029 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
PARVB-205ENST00000444029 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
PARVB-205ENST00000444029 PEG3Q9GZU2 1588 aa19.79■□□□□ 0.76
PARVB-205ENST00000444029 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
PARVB-205ENST00000444029 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
PARVB-205ENST00000444029 FBLN2P98095 1184 aa19.63■□□□□ 0.73
PARVB-205ENST00000444029 URB2Q14146 1524 aaKnown RBP19.62■□□□□ 0.73
PARVB-205ENST00000444029 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
PARVB-205ENST00000444029 CFTRP13569 1480 aa19.52■□□□□ 0.72
PARVB-205ENST00000444029 WIZO95785 1651 aa19.51■□□□□ 0.71
PARVB-205ENST00000444029 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
PARVB-205ENST00000444029 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
PARVB-205ENST00000444029 AQRO60306 1485 aaKnown RBP eCLIP19.37■□□□□ 0.69
PARVB-205ENST00000444029 RSF1Q96T23 1441 aaPredicted RBP19.28■□□□□ 0.68
PARVB-205ENST00000444029 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
PARVB-205ENST00000444029 EIF4G3O43432 1585 aaKnown RBP19.25■□□□□ 0.67
PARVB-205ENST00000444029 CHMP7Q8WUX9 453 aaPredicted RBP19.24■□□□□ 0.67
PARVB-205ENST00000444029 CHD1O14646 1710 aa19.23■□□□□ 0.67
PARVB-205ENST00000444029 ILDR1Q86SU0 546 aaPredicted RBP19.19■□□□□ 0.66
PARVB-205ENST00000444029 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
PARVB-205ENST00000444029 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
PARVB-205ENST00000444029 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
PARVB-205ENST00000444029 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
PARVB-205ENST00000444029 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.64
PARVB-205ENST00000444029 SNAPC4Q5SXM2 1469 aa19.05■□□□□ 0.64
PARVB-205ENST00000444029 SOGA1O94964 1423 aa19.04■□□□□ 0.64
PARVB-205ENST00000444029 DNMBPQ6XZF7 1577 aa19.04■□□□□ 0.64
PARVB-205ENST00000444029 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
PARVB-205ENST00000444029 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
PARVB-205ENST00000444029 POLA1P09884 1462 aaPredicted RBP19.02■□□□□ 0.63
PARVB-205ENST00000444029 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
PARVB-205ENST00000444029 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
PARVB-205ENST00000444029 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
PARVB-205ENST00000444029 KDM4FA0A1W2PPD8 638 aa18.89■□□□□ 0.61
PARVB-205ENST00000444029 GRIN2BQ13224 1484 aa18.86■□□□□ 0.61
PARVB-205ENST00000444029 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
PARVB-205ENST00000444029 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
PARVB-205ENST00000444029 FAM69CQ0P6D2 419 aa18.84■□□□□ 0.61
PARVB-205ENST00000444029 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
PARVB-205ENST00000444029 ERCC6L2Q5T890 1561 aa18.8■□□□□ 0.6
PARVB-205ENST00000444029 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
PARVB-205ENST00000444029 CUX1P39880 1505 aa18.64■□□□□ 0.58
PARVB-205ENST00000444029 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
PARVB-205ENST00000444029 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
PARVB-205ENST00000444029 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
PARVB-205ENST00000444029 KIF13AQ9H1H9 1805 aa18.59■□□□□ 0.57
PARVB-205ENST00000444029 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
PARVB-205ENST00000444029 JPH4Q96JJ6 628 aa18.57■□□□□ 0.56
PARVB-205ENST00000444029 ABCC10Q5T3U5 1492 aa18.56■□□□□ 0.56
PARVB-205ENST00000444029 PBRM1Q86U86 1689 aa18.56■□□□□ 0.56
PARVB-205ENST00000444029 NUP160Q12769 1436 aa18.52■□□□□ 0.56
PARVB-205ENST00000444029 KDM6BO15054 1643 aa18.52■□□□□ 0.55
PARVB-205ENST00000444029 TTBK1Q5TCY1 1321 aaPredicted RBP18.51■□□□□ 0.55
PARVB-205ENST00000444029 ABCA10Q8WWZ4 1543 aa18.47■□□□□ 0.55
PARVB-205ENST00000444029 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
PARVB-205ENST00000444029 ABCA5Q8WWZ7 1642 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms