RNA–Protein interactions for RNA: ENST00000443943.5

AP1S1-203, Transcript of adaptor related protein complex 1 subunit sigma 1, humanhuman

TSL 3

Gene AP1S1, Length 741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1-203ENST00000443943 NISCHQ9Y2I1 1504 aa52.04■■■■■ 5.92
AP1S1-203ENST00000443943 ABCC9O60706 1549 aa46.66■■■■■ 5.06
AP1S1-203ENST00000443943 CCDC180Q9P1Z9 1646 aa46.65■■■■■ 5.06
AP1S1-203ENST00000443943 RB1CC1Q8TDY2 1594 aa44.4■■■■■ 4.7
AP1S1-203ENST00000443943 NACADO15069 1562 aa44.1■■■■■ 4.65
AP1S1-203ENST00000443943 DCAF8L2P0C7V8 631 aa43.91■■■■■ 4.62
AP1S1-203ENST00000443943 DNAJC5BQ9UF47 199 aa43.66■■■■■ 4.58
AP1S1-203ENST00000443943 MYO15BQ96JP2 1530 aa43.52■■■■■ 4.56
AP1S1-203ENST00000443943 PABPN1Q86U42 306 aaKnown RBP eCLIP43.44■■■■■ 4.54
AP1S1-203ENST00000443943 UNC13AQ9UPW8 1703 aa43.33■■■■■ 4.53
AP1S1-203ENST00000443943 ZCCHC6Q5VYS8 1495 aaKnown RBP43.17■■■■■ 4.5
AP1S1-203ENST00000443943 BICRAQ9NZM4 1560 aa43.1■■■■■ 4.49
AP1S1-203ENST00000443943 DCAF1Q9Y4B6 1507 aa42.98■■■■■ 4.47
AP1S1-203ENST00000443943 SCRIBQ14160 1630 aa42.57■■■■■ 4.41
AP1S1-203ENST00000443943 SHROOM4Q9ULL8 1493 aa42.55■■■■■ 4.4
AP1S1-203ENST00000443943 CC2D2AQ9P2K1 1620 aa42.12■■■■■ 4.33
AP1S1-203ENST00000443943 EIF4G1Q04637 1599 aaKnown RBP42.06■■■■■ 4.32
AP1S1-203ENST00000443943 CECR2Q9BXF3 1484 aa42.02■■■■■ 4.32
AP1S1-203ENST00000443943 NCAPD3P42695 1498 aa40.72■■■■■ 4.11
AP1S1-203ENST00000443943 ATAD2BQ9ULI0 1458 aa40.62■■■■■ 4.09
AP1S1-203ENST00000443943 SMARCA4P51532 1647 aa40.59■■■■■ 4.09
AP1S1-203ENST00000443943 SMARCA2P51531 1590 aa40.51■■■■■ 4.08
AP1S1-203ENST00000443943 HMGXB3Q12766 1538 aa40.44■■■■■ 4.06
AP1S1-203ENST00000443943 BAZ1AQ9NRL2 1556 aaPredicted RBP40.4■■■■■ 4.06
AP1S1-203ENST00000443943 ERCC6Q03468 1493 aa40.3■■■■■ 4.04
AP1S1-203ENST00000443943 BAZ1BQ9UIG0 1483 aaKnown RBP40.26■■■■■ 4.03
AP1S1-203ENST00000443943 CUX2O14529 1486 aa40.18■■■■■ 4.02
AP1S1-203ENST00000443943 PEG3Q9GZU2 1588 aa40.18■■■■■ 4.02
AP1S1-203ENST00000443943 MROH2BQ7Z745 1585 aa40.11■■■■■ 4.01
AP1S1-203ENST00000443943 NESP48681 1621 aa40.09■■■■■ 4.01
AP1S1-203ENST00000443943 DNAJC5Q9H3Z4 198 aa40.05■■■■■ 4
AP1S1-203ENST00000443943 LAMC3Q9Y6N6 1575 aa39.8■■■■□ 3.96
AP1S1-203ENST00000443943 THOC2Q8NI27 1593 aaKnown RBP39.67■■■■□ 3.94
AP1S1-203ENST00000443943 WIZO95785 1651 aa39.6■■■■□ 3.93
AP1S1-203ENST00000443943 PDS5BQ9NTI5 1447 aa39.58■■■■□ 3.93
AP1S1-203ENST00000443943 KIF21AQ7Z4S6 1674 aa39.54■■■■□ 3.92
AP1S1-203ENST00000443943 CADPSQ9ULU8 1353 aa39.49■■■■□ 3.91
AP1S1-203ENST00000443943 RSF1Q96T23 1441 aaPredicted RBP39.31■■■■□ 3.88
AP1S1-203ENST00000443943 MRC2Q9UBG0 1479 aa39.25■■■■□ 3.87
AP1S1-203ENST00000443943 WDR62O43379 1518 aa39.14■■■■□ 3.86
AP1S1-203ENST00000443943 TOP2AP11388 1531 aaKnown RBP39.14■■■■□ 3.86
AP1S1-203ENST00000443943 CEP164Q9UPV0 1460 aa39.12■■■■□ 3.85
AP1S1-203ENST00000443943 FANCD2Q9BXW9 1451 aa39.07■■■■□ 3.85
AP1S1-203ENST00000443943 CFTRP13569 1480 aa39.06■■■■□ 3.84
AP1S1-203ENST00000443943 URB2Q14146 1524 aaKnown RBP38.74■■■■□ 3.79
AP1S1-203ENST00000443943 CCDC88BA6NC98 1476 aa38.68■■■■□ 3.78
AP1S1-203ENST00000443943 PRDM2Q13029 1718 aa38.6■■■■□ 3.77
AP1S1-203ENST00000443943 TRIM41Q8WV44 630 aa38.38■■■■□ 3.73
AP1S1-203ENST00000443943 OSCARQ8IYS5 282 aa38.33■■■■□ 3.73
AP1S1-203ENST00000443943 IFT140Q96RY7 1462 aa38.33■■■■□ 3.73
AP1S1-203ENST00000443943 TOPBP1Q92547 1522 aa38.33■■■■□ 3.73
AP1S1-203ENST00000443943 ZNF608Q9ULD9 1512 aaPredicted RBP38.25■■■■□ 3.71
AP1S1-203ENST00000443943 ABCC8Q09428 1581 aa38.23■■■■□ 3.71
AP1S1-203ENST00000443943 DNMBPQ6XZF7 1577 aa38.19■■■■□ 3.7
AP1S1-203ENST00000443943 EIF4G3O43432 1585 aaKnown RBP38.05■■■■□ 3.68
AP1S1-203ENST00000443943 TARBP1Q13395 1621 aaKnown RBP37.96■■■■□ 3.67
AP1S1-203ENST00000443943 POLA1P09884 1462 aaPredicted RBP37.95■■■■□ 3.67
AP1S1-203ENST00000443943 AQRO60306 1485 aaKnown RBP eCLIP37.9■■■■□ 3.662e-7■■■■■ 26.8
AP1S1-203ENST00000443943 RIMBP3CA6NJZ7 1639 aa37.83■■■■□ 3.65
AP1S1-203ENST00000443943 RIMBP3BA6NNM3 1639 aa37.83■■■■□ 3.65
AP1S1-203ENST00000443943 RIMBP3Q9UFD9 1639 aa37.83■■■■□ 3.65
AP1S1-203ENST00000443943 RAD54L2Q9Y4B4 1467 aa37.8■■■■□ 3.64
AP1S1-203ENST00000443943 SOGA1O94964 1423 aa37.76■■■■□ 3.63
AP1S1-203ENST00000443943 ARHGEF11O15085 1522 aa37.74■■■■□ 3.63
AP1S1-203ENST00000443943 FGD5Q6ZNL6 1462 aa37.72■■■■□ 3.63
AP1S1-203ENST00000443943 CHD1O14646 1710 aa37.71■■■■□ 3.63
AP1S1-203ENST00000443943 TDRD9Q8NDG6 1382 aaKnown RBP37.69■■■■□ 3.62
AP1S1-203ENST00000443943 CUX1P39880 1505 aa37.69■■■■□ 3.62
AP1S1-203ENST00000443943 FBLN2P98095 1184 aa37.66■■■■□ 3.62
AP1S1-203ENST00000443943 SUPT5HO00267 1087 aaKnown RBP37.62■■■■□ 3.61
AP1S1-203ENST00000443943 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
AP1S1-203ENST00000443943 SNAPC4Q5SXM2 1469 aa37.55■■■■□ 3.6
AP1S1-203ENST00000443943 CYB5RLQ6IPT4 315 aa37.44■■■■□ 3.58
AP1S1-203ENST00000443943 GRIN2BQ13224 1484 aa37.44■■■■□ 3.58
AP1S1-203ENST00000443943 MAGI1Q96QZ7 1491 aaPredicted RBP37.44■■■■□ 3.58
AP1S1-203ENST00000443943 ARAP1Q96P48 1450 aa37.39■■■■□ 3.58
AP1S1-203ENST00000443943 CHMP7Q8WUX9 453 aaPredicted RBP37.38■■■■□ 3.57
AP1S1-203ENST00000443943 CLASP1Q7Z460 1538 aa37.32■■■■□ 3.57
AP1S1-203ENST00000443943 SYNJ2O15056 1496 aa37.32■■■■□ 3.56
AP1S1-203ENST00000443943 GAPVD1Q14C86 1478 aa37.32■■■■□ 3.56
AP1S1-203ENST00000443943 SYNJ1O43426 1573 aa37.3■■■■□ 3.56
AP1S1-203ENST00000443943 ABCA10Q8WWZ4 1543 aa37.28■■■■□ 3.56
AP1S1-203ENST00000443943 PBRM1Q86U86 1689 aa37.26■■■■□ 3.56
AP1S1-203ENST00000443943 ABCA5Q8WWZ7 1642 aa37.22■■■■□ 3.55
AP1S1-203ENST00000443943 WRNQ14191 1432 aaPredicted RBP eCLIP37.15■■■■□ 3.54
AP1S1-203ENST00000443943 TOP2BQ02880 1626 aa37.08■■■■□ 3.53
AP1S1-203ENST00000443943 BIVM-ERCC5R4GMW8 1640 aa37.08■■■■□ 3.53
AP1S1-203ENST00000443943 TRHP20396 242 aaPredicted RBP37.03■■■■□ 3.52
AP1S1-203ENST00000443943 ADAMTS12P58397 1594 aa36.96■■■■□ 3.51
AP1S1-203ENST00000443943 GRIN2AQ12879 1464 aa36.96■■■■□ 3.51
AP1S1-203ENST00000443943 FHAD1B1AJZ9 1412 aa36.85■■■■□ 3.49
AP1S1-203ENST00000443943 NUP160Q12769 1436 aa36.84■■■■□ 3.49
AP1S1-203ENST00000443943 CEP170Q5SW79 1584 aa36.83■■■■□ 3.49
AP1S1-203ENST00000443943 ERICH3Q5RHP9 1530 aa36.81■■■■□ 3.48
AP1S1-203ENST00000443943 ERCC6L2Q5T890 1561 aa36.74■■■■□ 3.47
AP1S1-203ENST00000443943 SHROOM2Q13796 1616 aa36.63■■■■□ 3.45
AP1S1-203ENST00000443943 PRG4Q92954 1404 aaPredicted RBP36.47■■■■□ 3.43
AP1S1-203ENST00000443943 RUSC2Q8N2Y8 1516 aa36.44■■■■□ 3.42
AP1S1-203ENST00000443943 JPH4Q96JJ6 628 aa36.42■■■■□ 3.42
AP1S1-203ENST00000443943 KIF27Q86VH2 1401 aa36.39■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms