RNA–Protein interactions for RNA: ENST00000443927.5

ITSN2-208, Transcript of intersectin 2, humanhuman

TSL 3

Gene ITSN2, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-208ENST00000443927 NISCHQ9Y2I1 1504 aa48.43■■■■■ 5.34
ITSN2-208ENST00000443927 CCDC180Q9P1Z9 1646 aa43.46■■■■■ 4.55
ITSN2-208ENST00000443927 ABCC9O60706 1549 aa43.06■■■■■ 4.48
ITSN2-208ENST00000443927 RB1CC1Q8TDY2 1594 aa41.16■■■■■ 4.18
ITSN2-208ENST00000443927 NACADO15069 1562 aa40.92■■■■■ 4.14
ITSN2-208ENST00000443927 DCAF8L2P0C7V8 631 aa40.62■■■■■ 4.09
ITSN2-208ENST00000443927 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
ITSN2-208ENST00000443927 UNC13AQ9UPW8 1703 aa40.34■■■■■ 4.05
ITSN2-208ENST00000443927 ZCCHC6Q5VYS8 1495 aaKnown RBP40.25■■■■■ 4.03
ITSN2-208ENST00000443927 PABPN1Q86U42 306 aaKnown RBP eCLIP40.04■■■■■ 4
ITSN2-208ENST00000443927 DCAF1Q9Y4B6 1507 aa40.03■■■■■ 4
ITSN2-208ENST00000443927 DNAJC5BQ9UF47 199 aa39.97■■■■□ 3.99
ITSN2-208ENST00000443927 BICRAQ9NZM4 1560 aa39.94■■■■□ 3.98
ITSN2-208ENST00000443927 SCRIBQ14160 1630 aa39.61■■■■□ 3.93
ITSN2-208ENST00000443927 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
ITSN2-208ENST00000443927 CC2D2AQ9P2K1 1620 aa38.96■■■■□ 3.83
ITSN2-208ENST00000443927 EIF4G1Q04637 1599 aaKnown RBP38.95■■■■□ 3.83
ITSN2-208ENST00000443927 CECR2Q9BXF3 1484 aa38.74■■■■□ 3.79
ITSN2-208ENST00000443927 SMARCA4P51532 1647 aa37.79■■■■□ 3.64
ITSN2-208ENST00000443927 NCAPD3P42695 1498 aa37.7■■■■□ 3.63
ITSN2-208ENST00000443927 ATAD2BQ9ULI0 1458 aa37.65■■■■□ 3.62
ITSN2-208ENST00000443927 SMARCA2P51531 1590 aa37.63■■■■□ 3.61
ITSN2-208ENST00000443927 BAZ1AQ9NRL2 1556 aaPredicted RBP37.62■■■■□ 3.61
ITSN2-208ENST00000443927 HMGXB3Q12766 1538 aa37.56■■■■□ 3.6
ITSN2-208ENST00000443927 PEG3Q9GZU2 1588 aa37.39■■■■□ 3.58
ITSN2-208ENST00000443927 BAZ1BQ9UIG0 1483 aaKnown RBP37.36■■■■□ 3.57
ITSN2-208ENST00000443927 MROH2BQ7Z745 1585 aa37.34■■■■□ 3.57
ITSN2-208ENST00000443927 ERCC6Q03468 1493 aa37.18■■■■□ 3.54
ITSN2-208ENST00000443927 NESP48681 1621 aa37.08■■■■□ 3.53
ITSN2-208ENST00000443927 CUX2O14529 1486 aa36.99■■■■□ 3.51
ITSN2-208ENST00000443927 WIZO95785 1651 aa36.96■■■■□ 3.51
ITSN2-208ENST00000443927 LAMC3Q9Y6N6 1575 aa36.91■■■■□ 3.5
ITSN2-208ENST00000443927 THOC2Q8NI27 1593 aaKnown RBP36.74■■■■□ 3.47
ITSN2-208ENST00000443927 KIF21AQ7Z4S6 1674 aa36.73■■■■□ 3.47
ITSN2-208ENST00000443927 RSF1Q96T23 1441 aaPredicted RBP36.62■■■■□ 3.45
ITSN2-208ENST00000443927 PDS5BQ9NTI5 1447 aa36.59■■■■□ 3.45
ITSN2-208ENST00000443927 CADPSQ9ULU8 1353 aa36.55■■■■□ 3.44
ITSN2-208ENST00000443927 TOP2AP11388 1531 aaKnown RBP36.5■■■■□ 3.43
ITSN2-208ENST00000443927 DNAJC5Q9H3Z4 198 aa36.49■■■■□ 3.43
ITSN2-208ENST00000443927 MRC2Q9UBG0 1479 aa36.33■■■■□ 3.41
ITSN2-208ENST00000443927 CEP164Q9UPV0 1460 aa36.26■■■■□ 3.4
ITSN2-208ENST00000443927 WDR62O43379 1518 aa36.25■■■■□ 3.39
ITSN2-208ENST00000443927 CFTRP13569 1480 aa36.24■■■■□ 3.39
ITSN2-208ENST00000443927 FANCD2Q9BXW9 1451 aa36.21■■■■□ 3.39
ITSN2-208ENST00000443927 PRDM2Q13029 1718 aa36.12■■■■□ 3.37
ITSN2-208ENST00000443927 CCDC88BA6NC98 1476 aa36■■■■□ 3.35
ITSN2-208ENST00000443927 URB2Q14146 1524 aaKnown RBP35.91■■■■□ 3.34
ITSN2-208ENST00000443927 TOPBP1Q92547 1522 aa35.57■■■■□ 3.28
ITSN2-208ENST00000443927 DNMBPQ6XZF7 1577 aa35.51■■■■□ 3.27
ITSN2-208ENST00000443927 IFT140Q96RY7 1462 aa35.48■■■■□ 3.27
ITSN2-208ENST00000443927 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
ITSN2-208ENST00000443927 ZNF608Q9ULD9 1512 aaPredicted RBP35.4■■■■□ 3.26
ITSN2-208ENST00000443927 EIF4G3O43432 1585 aaKnown RBP35.34■■■■□ 3.25
ITSN2-208ENST00000443927 TARBP1Q13395 1621 aaKnown RBP35.28■■■■□ 3.24
ITSN2-208ENST00000443927 POLA1P09884 1462 aaPredicted RBP35.23■■■■□ 3.23
ITSN2-208ENST00000443927 OSCARQ8IYS5 282 aa35.21■■■■□ 3.23
ITSN2-208ENST00000443927 SUPT5HO00267 1087 aaKnown RBP35.17■■■■□ 3.22
ITSN2-208ENST00000443927 CUX1P39880 1505 aa35.08■■■■□ 3.21
ITSN2-208ENST00000443927 TRIM41Q8WV44 630 aa35.08■■■■□ 3.21
ITSN2-208ENST00000443927 AQRO60306 1485 aaKnown RBP eCLIP35.08■■■■□ 3.21
ITSN2-208ENST00000443927 FGD5Q6ZNL6 1462 aa35.06■■■■□ 3.2
ITSN2-208ENST00000443927 RAD54L2Q9Y4B4 1467 aa35.06■■■■□ 3.2
ITSN2-208ENST00000443927 CHD1O14646 1710 aa35.03■■■■□ 3.2
ITSN2-208ENST00000443927 SOGA1O94964 1423 aa34.99■■■■□ 3.19
ITSN2-208ENST00000443927 WDR97A6NE52 1622 aa34.95■■■■□ 3.18
ITSN2-208ENST00000443927 RIMBP3CA6NJZ7 1639 aa34.92■■■■□ 3.18
ITSN2-208ENST00000443927 RIMBP3BA6NNM3 1639 aa34.92■■■■□ 3.18
ITSN2-208ENST00000443927 RIMBP3Q9UFD9 1639 aa34.92■■■■□ 3.18
ITSN2-208ENST00000443927 TDRD9Q8NDG6 1382 aaKnown RBP34.89■■■■□ 3.18
ITSN2-208ENST00000443927 ARHGEF11O15085 1522 aa34.81■■■■□ 3.16
ITSN2-208ENST00000443927 SNAPC4Q5SXM2 1469 aa34.8■■■■□ 3.16
ITSN2-208ENST00000443927 FBLN2P98095 1184 aa34.75■■■■□ 3.15
ITSN2-208ENST00000443927 PBRM1Q86U86 1689 aa34.75■■■■□ 3.15
ITSN2-208ENST00000443927 GRIN2BQ13224 1484 aa34.71■■■■□ 3.15
ITSN2-208ENST00000443927 MAGI1Q96QZ7 1491 aaPredicted RBP34.71■■■■□ 3.15
ITSN2-208ENST00000443927 ABCA5Q8WWZ7 1642 aa34.66■■■■□ 3.14
ITSN2-208ENST00000443927 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
ITSN2-208ENST00000443927 ABCA10Q8WWZ4 1543 aa34.65■■■■□ 3.14
ITSN2-208ENST00000443927 GAPVD1Q14C86 1478 aa34.63■■■■□ 3.13
ITSN2-208ENST00000443927 TOP2BQ02880 1626 aa34.63■■■■□ 3.13
ITSN2-208ENST00000443927 SYNJ1O43426 1573 aa34.61■■■■□ 3.13
ITSN2-208ENST00000443927 SYNJ2O15056 1496 aa34.58■■■■□ 3.13
ITSN2-208ENST00000443927 WRNQ14191 1432 aaPredicted RBP eCLIP34.57■■■■□ 3.13
ITSN2-208ENST00000443927 CLASP1Q7Z460 1538 aa34.56■■■■□ 3.12
ITSN2-208ENST00000443927 CHMP7Q8WUX9 453 aaPredicted RBP34.52■■■■□ 3.12
ITSN2-208ENST00000443927 ARAP1Q96P48 1450 aa34.48■■■■□ 3.11
ITSN2-208ENST00000443927 ADAMTS12P58397 1594 aa34.4■■■■□ 3.1
ITSN2-208ENST00000443927 CYB5RLQ6IPT4 315 aa34.39■■■■□ 3.1
ITSN2-208ENST00000443927 GRIN2AQ12879 1464 aa34.3■■■■□ 3.08
ITSN2-208ENST00000443927 ERICH3Q5RHP9 1530 aa34.25■■■■□ 3.07
ITSN2-208ENST00000443927 CEP170Q5SW79 1584 aa34.2■■■■□ 3.07
ITSN2-208ENST00000443927 FHAD1B1AJZ9 1412 aa34.19■■■■□ 3.06
ITSN2-208ENST00000443927 NUP160Q12769 1436 aa34.14■■■■□ 3.06
ITSN2-208ENST00000443927 ERCC6L2Q5T890 1561 aa34.04■■■■□ 3.04
ITSN2-208ENST00000443927 SHROOM2Q13796 1616 aa34.04■■■■□ 3.04
ITSN2-208ENST00000443927 TRHP20396 242 aaPredicted RBP33.94■■■■□ 3.02
ITSN2-208ENST00000443927 RUSC2Q8N2Y8 1516 aa33.92■■■■□ 3.02
ITSN2-208ENST00000443927 CUL7Q14999 1698 aa33.89■■■■□ 3.02
ITSN2-208ENST00000443927 KIF27Q86VH2 1401 aa33.87■■■■□ 3.01
ITSN2-208ENST00000443927 PRG4Q92954 1404 aaPredicted RBP33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms