RNA–Protein interactions for RNA: ENST00000443878.1

RAB5A-204, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-204ENST00000443878 NISCHQ9Y2I1 1504 aa51.61■■■■■ 5.85
RAB5A-204ENST00000443878 CCDC180Q9P1Z9 1646 aa46.09■■■■■ 4.97
RAB5A-204ENST00000443878 ABCC9O60706 1549 aa45.3■■■■■ 4.84
RAB5A-204ENST00000443878 RB1CC1Q8TDY2 1594 aa43.53■■■■■ 4.56
RAB5A-204ENST00000443878 NACADO15069 1562 aa43.41■■■■■ 4.54
RAB5A-204ENST00000443878 DCAF8L2P0C7V8 631 aa43.2■■■■■ 4.51
RAB5A-204ENST00000443878 MYO15BQ96JP2 1530 aa43.08■■■■■ 4.49
RAB5A-204ENST00000443878 ZCCHC6Q5VYS8 1495 aaKnown RBP42.93■■■■■ 4.46
RAB5A-204ENST00000443878 DCAF1Q9Y4B6 1507 aa42.76■■■■■ 4.44
RAB5A-204ENST00000443878 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
RAB5A-204ENST00000443878 PABPN1Q86U42 306 aaKnown RBP eCLIP42.25■■■■■ 4.35
RAB5A-204ENST00000443878 BICRAQ9NZM4 1560 aa42.14■■■■■ 4.34
RAB5A-204ENST00000443878 SCRIBQ14160 1630 aa41.94■■■■■ 4.3
RAB5A-204ENST00000443878 SHROOM4Q9ULL8 1493 aa41.82■■■■■ 4.29
RAB5A-204ENST00000443878 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
RAB5A-204ENST00000443878 EIF4G1Q04637 1599 aaKnown RBP41.09■■■■■ 4.17
RAB5A-204ENST00000443878 CC2D2AQ9P2K1 1620 aa41■■■■■ 4.15
RAB5A-204ENST00000443878 CECR2Q9BXF3 1484 aa40.77■■■■■ 4.12
RAB5A-204ENST00000443878 SMARCA4P51532 1647 aa40.12■■■■■ 4.01
RAB5A-204ENST00000443878 BAZ1AQ9NRL2 1556 aaPredicted RBP40.06■■■■■ 4
RAB5A-204ENST00000443878 NCAPD3P42695 1498 aa40.03■■■■■ 4
RAB5A-204ENST00000443878 ATAD2BQ9ULI0 1458 aa39.98■■■■□ 3.99
RAB5A-204ENST00000443878 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
RAB5A-204ENST00000443878 HMGXB3Q12766 1538 aa39.82■■■■□ 3.97
RAB5A-204ENST00000443878 PEG3Q9GZU2 1588 aa39.76■■■■□ 3.96
RAB5A-204ENST00000443878 MROH2BQ7Z745 1585 aa39.72■■■■□ 3.95
RAB5A-204ENST00000443878 BAZ1BQ9UIG0 1483 aaKnown RBP39.65■■■■□ 3.94
RAB5A-204ENST00000443878 WIZO95785 1651 aa39.29■■■■□ 3.88
RAB5A-204ENST00000443878 RSF1Q96T23 1441 aaPredicted RBP39.17■■■■□ 3.86
RAB5A-204ENST00000443878 ERCC6Q03468 1493 aa39.13■■■■□ 3.85
RAB5A-204ENST00000443878 NESP48681 1621 aa39.08■■■■□ 3.85
RAB5A-204ENST00000443878 LAMC3Q9Y6N6 1575 aa39.06■■■■□ 3.84
RAB5A-204ENST00000443878 TOP2AP11388 1531 aaKnown RBP38.9■■■■□ 3.82
RAB5A-204ENST00000443878 CUX2O14529 1486 aa38.88■■■■□ 3.81
RAB5A-204ENST00000443878 CADPSQ9ULU8 1353 aa38.84■■■■□ 3.81
RAB5A-204ENST00000443878 PDS5BQ9NTI5 1447 aa38.81■■■■□ 3.8
RAB5A-204ENST00000443878 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
RAB5A-204ENST00000443878 THOC2Q8NI27 1593 aaKnown RBP38.61■■■■□ 3.77
RAB5A-204ENST00000443878 CFTRP13569 1480 aa38.54■■■■□ 3.76
RAB5A-204ENST00000443878 CCDC88BA6NC98 1476 aa38.41■■■■□ 3.74
RAB5A-204ENST00000443878 MRC2Q9UBG0 1479 aa38.4■■■■□ 3.74
RAB5A-204ENST00000443878 FANCD2Q9BXW9 1451 aa38.39■■■■□ 3.74
RAB5A-204ENST00000443878 CEP164Q9UPV0 1460 aa38.39■■■■□ 3.74
RAB5A-204ENST00000443878 WDR62O43379 1518 aa38.28■■■■□ 3.72
RAB5A-204ENST00000443878 PRDM2Q13029 1718 aa38.26■■■■□ 3.71
RAB5A-204ENST00000443878 DNAJC5Q9H3Z4 198 aa38.01■■■■□ 3.68
RAB5A-204ENST00000443878 URB2Q14146 1524 aaKnown RBP37.98■■■■□ 3.67
RAB5A-204ENST00000443878 SUPT5HO00267 1087 aaKnown RBP37.9■■■■□ 3.66
RAB5A-204ENST00000443878 ABCC8Q09428 1581 aa37.8■■■■□ 3.64
RAB5A-204ENST00000443878 TOPBP1Q92547 1522 aa37.73■■■■□ 3.63
RAB5A-204ENST00000443878 DNMBPQ6XZF7 1577 aa37.68■■■■□ 3.62
RAB5A-204ENST00000443878 IFT140Q96RY7 1462 aa37.61■■■■□ 3.61
RAB5A-204ENST00000443878 ZNF608Q9ULD9 1512 aaPredicted RBP37.38■■■■□ 3.57
RAB5A-204ENST00000443878 POLA1P09884 1462 aaPredicted RBP37.38■■■■□ 3.57
RAB5A-204ENST00000443878 TARBP1Q13395 1621 aaKnown RBP37.34■■■■□ 3.57
RAB5A-204ENST00000443878 CUX1P39880 1505 aa37.3■■■■□ 3.56
RAB5A-204ENST00000443878 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.56
RAB5A-204ENST00000443878 SOGA1O94964 1423 aa37.24■■■■□ 3.55
RAB5A-204ENST00000443878 FGD5Q6ZNL6 1462 aa37.24■■■■□ 3.55
RAB5A-204ENST00000443878 OSCARQ8IYS5 282 aa37.19■■■■□ 3.54
RAB5A-204ENST00000443878 RAD54L2Q9Y4B4 1467 aa37.18■■■■□ 3.54
RAB5A-204ENST00000443878 AQRO60306 1485 aaKnown RBP eCLIP37.14■■■■□ 3.542e-8■□□□□ 8.7
RAB5A-204ENST00000443878 WDR97A6NE52 1622 aa37.14■■■■□ 3.54
RAB5A-204ENST00000443878 TDRD9Q8NDG6 1382 aaKnown RBP37.03■■■■□ 3.52
RAB5A-204ENST00000443878 WRNQ14191 1432 aaPredicted RBP eCLIP36.98■■■■□ 3.51
RAB5A-204ENST00000443878 TOP2BQ02880 1626 aa36.94■■■■□ 3.5
RAB5A-204ENST00000443878 BIVM-ERCC5R4GMW8 1640 aa36.94■■■■□ 3.5
RAB5A-204ENST00000443878 ABCA10Q8WWZ4 1543 aa36.9■■■■□ 3.5
RAB5A-204ENST00000443878 GRIN2BQ13224 1484 aa36.87■■■■□ 3.49
RAB5A-204ENST00000443878 SYNJ1O43426 1573 aa36.86■■■■□ 3.49
RAB5A-204ENST00000443878 CHD1O14646 1710 aa36.85■■■■□ 3.49
RAB5A-204ENST00000443878 SNAPC4Q5SXM2 1469 aa36.82■■■■□ 3.49
RAB5A-204ENST00000443878 MAGI1Q96QZ7 1491 aaPredicted RBP36.82■■■■□ 3.49
RAB5A-204ENST00000443878 GAPVD1Q14C86 1478 aa36.82■■■■□ 3.48
RAB5A-204ENST00000443878 FBLN2P98095 1184 aa36.77■■■■□ 3.48
RAB5A-204ENST00000443878 ABCA5Q8WWZ7 1642 aa36.76■■■■□ 3.48
RAB5A-204ENST00000443878 PBRM1Q86U86 1689 aa36.75■■■■□ 3.47
RAB5A-204ENST00000443878 CHMP7Q8WUX9 453 aaPredicted RBP36.67■■■■□ 3.46
RAB5A-204ENST00000443878 SYNJ2O15056 1496 aa36.66■■■■□ 3.46
RAB5A-204ENST00000443878 RIMBP3CA6NJZ7 1639 aa36.59■■■■□ 3.45
RAB5A-204ENST00000443878 RIMBP3BA6NNM3 1639 aa36.59■■■■□ 3.45
RAB5A-204ENST00000443878 RIMBP3Q9UFD9 1639 aa36.59■■■■□ 3.45
RAB5A-204ENST00000443878 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
RAB5A-204ENST00000443878 ARHGEF11O15085 1522 aa36.54■■■■□ 3.44
RAB5A-204ENST00000443878 ERICH3Q5RHP9 1530 aa36.48■■■■□ 3.43
RAB5A-204ENST00000443878 CLASP1Q7Z460 1538 aa36.46■■■■□ 3.43
RAB5A-204ENST00000443878 ADAMTS12P58397 1594 aa36.44■■■■□ 3.42
RAB5A-204ENST00000443878 FHAD1B1AJZ9 1412 aa36.4■■■■□ 3.42
RAB5A-204ENST00000443878 GRIN2AQ12879 1464 aa36.37■■■■□ 3.41
RAB5A-204ENST00000443878 KIF27Q86VH2 1401 aa36.25■■■■□ 3.39
RAB5A-204ENST00000443878 NUP160Q12769 1436 aa36.23■■■■□ 3.39
RAB5A-204ENST00000443878 ARAP1Q96P48 1450 aa36.22■■■■□ 3.39
RAB5A-204ENST00000443878 CYB5RLQ6IPT4 315 aa36.21■■■■□ 3.39
RAB5A-204ENST00000443878 CEP170Q5SW79 1584 aa36.17■■■■□ 3.38
RAB5A-204ENST00000443878 IGF1RP08069 1367 aa36.1■■■■□ 3.37
RAB5A-204ENST00000443878 CUL7Q14999 1698 aa36.09■■■■□ 3.37
RAB5A-204ENST00000443878 SHROOM2Q13796 1616 aa35.99■■■■□ 3.35
RAB5A-204ENST00000443878 CARMIL1Q5VZK9 1371 aa35.91■■■■□ 3.34
RAB5A-204ENST00000443878 RUSC2Q8N2Y8 1516 aa35.9■■■■□ 3.34
RAB5A-204ENST00000443878 ERCC6L2Q5T890 1561 aa35.86■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms