RNA–Protein interactions for RNA: ENST00000443757.5

RETREG2-205, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-205ENST00000443757 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
RETREG2-205ENST00000443757 CCDC180Q9P1Z9 1646 aa33.83■■■■□ 3.01
RETREG2-205ENST00000443757 ABCC9O60706 1549 aa32.87■■■□□ 2.85
RETREG2-205ENST00000443757 RB1CC1Q8TDY2 1594 aa31.77■■■□□ 2.68
RETREG2-205ENST00000443757 NACADO15069 1562 aa31.73■■■□□ 2.67
RETREG2-205ENST00000443757 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
RETREG2-205ENST00000443757 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.63
RETREG2-205ENST00000443757 DCAF8L2P0C7V8 631 aa31.41■■■□□ 2.62
RETREG2-205ENST00000443757 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
RETREG2-205ENST00000443757 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
RETREG2-205ENST00000443757 BICRAQ9NZM4 1560 aa30.76■■■□□ 2.52
RETREG2-205ENST00000443757 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
RETREG2-205ENST00000443757 PABPN1Q86U42 306 aaKnown RBP eCLIP30.6■■■□□ 2.49
RETREG2-205ENST00000443757 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
RETREG2-205ENST00000443757 DNAJC5BQ9UF47 199 aa30.1■■■□□ 2.41
RETREG2-205ENST00000443757 EIF4G1Q04637 1599 aaKnown RBP29.96■■■□□ 2.39
RETREG2-205ENST00000443757 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
RETREG2-205ENST00000443757 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
RETREG2-205ENST00000443757 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
RETREG2-205ENST00000443757 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
RETREG2-205ENST00000443757 SMARCA2P51531 1590 aa29.23■■■□□ 2.27
RETREG2-205ENST00000443757 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
RETREG2-205ENST00000443757 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
RETREG2-205ENST00000443757 PEG3Q9GZU2 1588 aa29.17■■■□□ 2.26
RETREG2-205ENST00000443757 HMGXB3Q12766 1538 aa29.13■■■□□ 2.25
RETREG2-205ENST00000443757 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
RETREG2-205ENST00000443757 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
RETREG2-205ENST00000443757 WIZO95785 1651 aa28.86■■■□□ 2.21
RETREG2-205ENST00000443757 RSF1Q96T23 1441 aaPredicted RBP28.72■■■□□ 2.19
RETREG2-205ENST00000443757 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
RETREG2-205ENST00000443757 LAMC3Q9Y6N6 1575 aa28.53■■■□□ 2.16
RETREG2-205ENST00000443757 NESP48681 1621 aa28.43■■■□□ 2.14
RETREG2-205ENST00000443757 ERCC6Q03468 1493 aa28.38■■■□□ 2.13
RETREG2-205ENST00000443757 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
RETREG2-205ENST00000443757 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
RETREG2-205ENST00000443757 PRDM2Q13029 1718 aa28.24■■■□□ 2.11
RETREG2-205ENST00000443757 PDS5BQ9NTI5 1447 aa28.24■■■□□ 2.11
RETREG2-205ENST00000443757 CUX2O14529 1486 aa28.19■■■□□ 2.1
RETREG2-205ENST00000443757 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
RETREG2-205ENST00000443757 CFTRP13569 1480 aa28.15■■■□□ 2.1
RETREG2-205ENST00000443757 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
RETREG2-205ENST00000443757 FANCD2Q9BXW9 1451 aa27.99■■■□□ 2.07
RETREG2-205ENST00000443757 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
RETREG2-205ENST00000443757 MRC2Q9UBG0 1479 aa27.95■■■□□ 2.07
RETREG2-205ENST00000443757 WDR62O43379 1518 aa27.92■■■□□ 2.06
RETREG2-205ENST00000443757 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
RETREG2-205ENST00000443757 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
RETREG2-205ENST00000443757 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
RETREG2-205ENST00000443757 DNMBPQ6XZF7 1577 aa27.58■■■□□ 2.01
RETREG2-205ENST00000443757 TOPBP1Q92547 1522 aa27.56■■■□□ 2
RETREG2-205ENST00000443757 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
RETREG2-205ENST00000443757 TARBP1Q13395 1621 aaKnown RBP27.32■■□□□ 1.96
RETREG2-205ENST00000443757 CUX1P39880 1505 aa27.31■■□□□ 1.96
RETREG2-205ENST00000443757 POLA1P09884 1462 aaPredicted RBP27.3■■□□□ 1.96
RETREG2-205ENST00000443757 DNAJC5Q9H3Z4 198 aa27.24■■□□□ 1.95
RETREG2-205ENST00000443757 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
RETREG2-205ENST00000443757 FGD5Q6ZNL6 1462 aa27.23■■□□□ 1.95
RETREG2-205ENST00000443757 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
RETREG2-205ENST00000443757 BIVM-ERCC5R4GMW8 1640 aa27.21■■□□□ 1.95
RETREG2-205ENST00000443757 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
RETREG2-205ENST00000443757 SOGA1O94964 1423 aa27.16■■□□□ 1.94
RETREG2-205ENST00000443757 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
RETREG2-205ENST00000443757 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
RETREG2-205ENST00000443757 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
RETREG2-205ENST00000443757 SYNJ1O43426 1573 aa27.08■■□□□ 1.93
RETREG2-205ENST00000443757 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.926e-9■■■■■ 39
RETREG2-205ENST00000443757 PBRM1Q86U86 1689 aa27.01■■□□□ 1.91
RETREG2-205ENST00000443757 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
RETREG2-205ENST00000443757 CHD1O14646 1710 aa26.97■■□□□ 1.91
RETREG2-205ENST00000443757 ABCA5Q8WWZ7 1642 aa26.96■■□□□ 1.91
RETREG2-205ENST00000443757 TDRD9Q8NDG6 1382 aaKnown RBP26.95■■□□□ 1.9
RETREG2-205ENST00000443757 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
RETREG2-205ENST00000443757 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
RETREG2-205ENST00000443757 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
RETREG2-205ENST00000443757 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
RETREG2-205ENST00000443757 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
RETREG2-205ENST00000443757 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
RETREG2-205ENST00000443757 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
RETREG2-205ENST00000443757 ADAMTS12P58397 1594 aa26.68■■□□□ 1.86
RETREG2-205ENST00000443757 FBLN2P98095 1184 aa26.66■■□□□ 1.86
RETREG2-205ENST00000443757 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.86
RETREG2-205ENST00000443757 CLASP1Q7Z460 1538 aa26.59■■□□□ 1.85
RETREG2-205ENST00000443757 RIMBP3CA6NJZ7 1639 aa26.58■■□□□ 1.85
RETREG2-205ENST00000443757 RIMBP3BA6NNM3 1639 aa26.58■■□□□ 1.85
RETREG2-205ENST00000443757 RIMBP3Q9UFD9 1639 aa26.58■■□□□ 1.85
RETREG2-205ENST00000443757 FHAD1B1AJZ9 1412 aa26.57■■□□□ 1.84
RETREG2-205ENST00000443757 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
RETREG2-205ENST00000443757 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
RETREG2-205ENST00000443757 CUL7Q14999 1698 aa26.54■■□□□ 1.84
RETREG2-205ENST00000443757 ARHGEF11O15085 1522 aa26.52■■□□□ 1.84
RETREG2-205ENST00000443757 CEP170Q5SW79 1584 aa26.44■■□□□ 1.82
RETREG2-205ENST00000443757 NUP160Q12769 1436 aa26.43■■□□□ 1.82
RETREG2-205ENST00000443757 IGF1RP08069 1367 aa26.39■■□□□ 1.82
RETREG2-205ENST00000443757 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
RETREG2-205ENST00000443757 SHROOM2Q13796 1616 aa26.34■■□□□ 1.81
RETREG2-205ENST00000443757 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
RETREG2-205ENST00000443757 CARMIL1Q5VZK9 1371 aa26.27■■□□□ 1.8
RETREG2-205ENST00000443757 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
RETREG2-205ENST00000443757 KIAA0586Q9BVV6 1533 aa26.17■■□□□ 1.78
RETREG2-205ENST00000443757 RAPGEF2Q9Y4G8 1499 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms