RNA–Protein interactions for RNA: ENST00000443744.1

LINC00656-201, long intergenic non-protein coding RNA 656, humanhuman

TSL 1 (best) BASIC

Gene LINC00656, Length 1,896 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00656-201ENST00000443744 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
LINC00656-201ENST00000443744 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
LINC00656-201ENST00000443744 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
LINC00656-201ENST00000443744 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
LINC00656-201ENST00000443744 SHROOM4Q9ULL8 1493 aa24.18■■□□□ 1.46
LINC00656-201ENST00000443744 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
LINC00656-201ENST00000443744 ABCC9O60706 1549 aa24■■□□□ 1.43
LINC00656-201ENST00000443744 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
LINC00656-201ENST00000443744 NACADO15069 1562 aa23.58■■□□□ 1.36
LINC00656-201ENST00000443744 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
LINC00656-201ENST00000443744 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
LINC00656-201ENST00000443744 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
LINC00656-201ENST00000443744 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
LINC00656-201ENST00000443744 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
LINC00656-201ENST00000443744 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
LINC00656-201ENST00000443744 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
LINC00656-201ENST00000443744 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
LINC00656-201ENST00000443744 BAZ1AQ9NRL2 1556 aaPredicted RBP22.6■■□□□ 1.21
LINC00656-201ENST00000443744 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
LINC00656-201ENST00000443744 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
LINC00656-201ENST00000443744 WIZO95785 1651 aa22.52■■□□□ 1.2
LINC00656-201ENST00000443744 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
LINC00656-201ENST00000443744 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
LINC00656-201ENST00000443744 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
LINC00656-201ENST00000443744 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
LINC00656-201ENST00000443744 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
LINC00656-201ENST00000443744 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
LINC00656-201ENST00000443744 ATAD2BQ9ULI0 1458 aa22.07■■□□□ 1.12
LINC00656-201ENST00000443744 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
LINC00656-201ENST00000443744 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
LINC00656-201ENST00000443744 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
LINC00656-201ENST00000443744 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
LINC00656-201ENST00000443744 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
LINC00656-201ENST00000443744 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
LINC00656-201ENST00000443744 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
LINC00656-201ENST00000443744 DNAJC5BQ9UF47 199 aa21.69■■□□□ 1.06
LINC00656-201ENST00000443744 FAM9AQ8IZU1 332 aaPredicted RBP21.55■■□□□ 1.04
LINC00656-201ENST00000443744 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
LINC00656-201ENST00000443744 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
LINC00656-201ENST00000443744 CFTRP13569 1480 aa21.43■■□□□ 1.02
LINC00656-201ENST00000443744 SOGA1O94964 1423 aa21.41■■□□□ 1.02
LINC00656-201ENST00000443744 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
LINC00656-201ENST00000443744 EEA1Q15075 1411 aa21.32■■□□□ 1
LINC00656-201ENST00000443744 TOP2BQ02880 1626 aa21.31■■□□□ 1
LINC00656-201ENST00000443744 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
LINC00656-201ENST00000443744 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
LINC00656-201ENST00000443744 EHMT2Q96KQ7 1210 aa21.24■□□□□ 0.99
LINC00656-201ENST00000443744 CUX1P39880 1505 aa21.23■□□□□ 0.99
LINC00656-201ENST00000443744 PRDM2Q13029 1718 aa21.22■□□□□ 0.99
LINC00656-201ENST00000443744 CSRNP3Q8WYN3 585 aa21.2■□□□□ 0.98
LINC00656-201ENST00000443744 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
LINC00656-201ENST00000443744 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
LINC00656-201ENST00000443744 KIF21BO75037 1637 aa21.06■□□□□ 0.96
LINC00656-201ENST00000443744 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
LINC00656-201ENST00000443744 NESP48681 1621 aa21.03■□□□□ 0.96
LINC00656-201ENST00000443744 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
LINC00656-201ENST00000443744 CEP162Q5TB80 1403 aa21.01■□□□□ 0.95
LINC00656-201ENST00000443744 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
LINC00656-201ENST00000443744 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
LINC00656-201ENST00000443744 RAPGEF2Q9Y4G8 1499 aa20.95■□□□□ 0.94
LINC00656-201ENST00000443744 PRXQ9BXM0 1461 aa20.93■□□□□ 0.94
LINC00656-201ENST00000443744 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
LINC00656-201ENST00000443744 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
LINC00656-201ENST00000443744 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
LINC00656-201ENST00000443744 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.93
LINC00656-201ENST00000443744 DNMBPQ6XZF7 1577 aa20.88■□□□□ 0.93
LINC00656-201ENST00000443744 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
LINC00656-201ENST00000443744 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
LINC00656-201ENST00000443744 CUX2O14529 1486 aa20.82■□□□□ 0.92
LINC00656-201ENST00000443744 URB2Q14146 1524 aaKnown RBP20.8■□□□□ 0.92
LINC00656-201ENST00000443744 POLA1P09884 1462 aaPredicted RBP20.8■□□□□ 0.92
LINC00656-201ENST00000443744 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
LINC00656-201ENST00000443744 HRCP23327 699 aa20.77■□□□□ 0.92
LINC00656-201ENST00000443744 IGF1RP08069 1367 aa20.76■□□□□ 0.91
LINC00656-201ENST00000443744 CLIP1P30622 1438 aa20.76■□□□□ 0.91
LINC00656-201ENST00000443744 PELP1Q8IZL8 1130 aaKnown RBP20.74■□□□□ 0.91
LINC00656-201ENST00000443744 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
LINC00656-201ENST00000443744 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
LINC00656-201ENST00000443744 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
LINC00656-201ENST00000443744 ERCC6Q03468 1493 aa20.69■□□□□ 0.9
LINC00656-201ENST00000443744 PPARGC1BQ86YN6 1023 aaKnown RBP20.67■□□□□ 0.9
LINC00656-201ENST00000443744 WDR97A6NE52 1622 aa20.64■□□□□ 0.9
LINC00656-201ENST00000443744 VPS8Q8N3P4 1428 aa20.63■□□□□ 0.89
LINC00656-201ENST00000443744 CARMIL1Q5VZK9 1371 aa20.62■□□□□ 0.89
LINC00656-201ENST00000443744 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
LINC00656-201ENST00000443744 ABCA5Q8WWZ7 1642 aa20.55■□□□□ 0.88
LINC00656-201ENST00000443744 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
LINC00656-201ENST00000443744 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
LINC00656-201ENST00000443744 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
LINC00656-201ENST00000443744 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
LINC00656-201ENST00000443744 CUL7Q14999 1698 aa20.49■□□□□ 0.87
LINC00656-201ENST00000443744 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
LINC00656-201ENST00000443744 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
LINC00656-201ENST00000443744 WDR62O43379 1518 aa20.44■□□□□ 0.86
LINC00656-201ENST00000443744 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
LINC00656-201ENST00000443744 THOC2Q8NI27 1593 aaKnown RBP20.41■□□□□ 0.86
LINC00656-201ENST00000443744 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
LINC00656-201ENST00000443744 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
LINC00656-201ENST00000443744 CTTNBP2Q8WZ74 1663 aa20.3■□□□□ 0.84
LINC00656-201ENST00000443744 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms