RNA–Protein interactions for RNA: ENST00000443477.5

RHBDD1-208, Transcript of rhomboid domain containing 1, humanhuman

TSL 4

Gene RHBDD1, Length 371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-208ENST00000443477 NISCHQ9Y2I1 1504 aa38.82■■■■□ 3.8
RHBDD1-208ENST00000443477 CCDC180Q9P1Z9 1646 aa34.8■■■■□ 3.16
RHBDD1-208ENST00000443477 ABCC9O60706 1549 aa34.71■■■■□ 3.15
RHBDD1-208ENST00000443477 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
RHBDD1-208ENST00000443477 NACADO15069 1562 aa32.9■■■□□ 2.86
RHBDD1-208ENST00000443477 DCAF8L2P0C7V8 631 aa32.67■■■□□ 2.82
RHBDD1-208ENST00000443477 DNAJC5BQ9UF47 199 aa32.52■■■□□ 2.8
RHBDD1-208ENST00000443477 MYO15BQ96JP2 1530 aa32.51■■■□□ 2.8
RHBDD1-208ENST00000443477 PABPN1Q86U42 306 aaKnown RBP eCLIP32.32■■■□□ 2.76
RHBDD1-208ENST00000443477 UNC13AQ9UPW8 1703 aa32.3■■■□□ 2.76
RHBDD1-208ENST00000443477 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
RHBDD1-208ENST00000443477 BICRAQ9NZM4 1560 aa32.13■■■□□ 2.73
RHBDD1-208ENST00000443477 DCAF1Q9Y4B6 1507 aa32.1■■■□□ 2.73
RHBDD1-208ENST00000443477 SHROOM4Q9ULL8 1493 aa31.75■■■□□ 2.67
RHBDD1-208ENST00000443477 SCRIBQ14160 1630 aa31.68■■■□□ 2.66
RHBDD1-208ENST00000443477 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
RHBDD1-208ENST00000443477 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
RHBDD1-208ENST00000443477 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
RHBDD1-208ENST00000443477 NCAPD3P42695 1498 aa30.39■■■□□ 2.46
RHBDD1-208ENST00000443477 ATAD2BQ9ULI0 1458 aa30.29■■■□□ 2.44
RHBDD1-208ENST00000443477 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
RHBDD1-208ENST00000443477 SMARCA2P51531 1590 aa30.2■■■□□ 2.42
RHBDD1-208ENST00000443477 HMGXB3Q12766 1538 aa30.16■■■□□ 2.42
RHBDD1-208ENST00000443477 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
RHBDD1-208ENST00000443477 PEG3Q9GZU2 1588 aa30■■■□□ 2.39
RHBDD1-208ENST00000443477 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
RHBDD1-208ENST00000443477 ERCC6Q03468 1493 aa29.96■■■□□ 2.39
RHBDD1-208ENST00000443477 CUX2O14529 1486 aa29.93■■■□□ 2.38
RHBDD1-208ENST00000443477 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
RHBDD1-208ENST00000443477 NESP48681 1621 aa29.84■■■□□ 2.37
RHBDD1-208ENST00000443477 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
RHBDD1-208ENST00000443477 LAMC3Q9Y6N6 1575 aa29.67■■■□□ 2.34
RHBDD1-208ENST00000443477 THOC2Q8NI27 1593 aaKnown RBP29.55■■■□□ 2.32
RHBDD1-208ENST00000443477 WIZO95785 1651 aa29.52■■■□□ 2.32
RHBDD1-208ENST00000443477 PDS5BQ9NTI5 1447 aa29.5■■■□□ 2.31
RHBDD1-208ENST00000443477 CADPSQ9ULU8 1353 aa29.46■■■□□ 2.31
RHBDD1-208ENST00000443477 KIF21AQ7Z4S6 1674 aa29.44■■■□□ 2.3
RHBDD1-208ENST00000443477 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
RHBDD1-208ENST00000443477 MRC2Q9UBG0 1479 aa29.23■■■□□ 2.27
RHBDD1-208ENST00000443477 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
RHBDD1-208ENST00000443477 WDR62O43379 1518 aa29.17■■■□□ 2.26
RHBDD1-208ENST00000443477 CFTRP13569 1480 aa29.14■■■□□ 2.26
RHBDD1-208ENST00000443477 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
RHBDD1-208ENST00000443477 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
RHBDD1-208ENST00000443477 URB2Q14146 1524 aaKnown RBP28.86■■■□□ 2.21
RHBDD1-208ENST00000443477 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
RHBDD1-208ENST00000443477 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
RHBDD1-208ENST00000443477 OSCARQ8IYS5 282 aa28.56■■■□□ 2.16
RHBDD1-208ENST00000443477 TOPBP1Q92547 1522 aa28.56■■■□□ 2.16
RHBDD1-208ENST00000443477 IFT140Q96RY7 1462 aa28.55■■■□□ 2.16
RHBDD1-208ENST00000443477 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
RHBDD1-208ENST00000443477 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
RHBDD1-208ENST00000443477 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
RHBDD1-208ENST00000443477 DNMBPQ6XZF7 1577 aa28.46■■■□□ 2.15
RHBDD1-208ENST00000443477 EIF4G3O43432 1585 aaKnown RBP28.33■■■□□ 2.12
RHBDD1-208ENST00000443477 TARBP1Q13395 1621 aaKnown RBP28.3■■■□□ 2.12
RHBDD1-208ENST00000443477 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
RHBDD1-208ENST00000443477 AQRO60306 1485 aaKnown RBP eCLIP28.23■■■□□ 2.11
RHBDD1-208ENST00000443477 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
RHBDD1-208ENST00000443477 RIMBP3CA6NJZ7 1639 aa28.15■■■□□ 2.1
RHBDD1-208ENST00000443477 RIMBP3BA6NNM3 1639 aa28.15■■■□□ 2.1
RHBDD1-208ENST00000443477 RIMBP3Q9UFD9 1639 aa28.15■■■□□ 2.1
RHBDD1-208ENST00000443477 SOGA1O94964 1423 aa28.14■■■□□ 2.1
RHBDD1-208ENST00000443477 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
RHBDD1-208ENST00000443477 ARHGEF11O15085 1522 aa28.09■■■□□ 2.09
RHBDD1-208ENST00000443477 CUX1P39880 1505 aa28.09■■■□□ 2.09
RHBDD1-208ENST00000443477 CHD1O14646 1710 aa28.07■■■□□ 2.08
RHBDD1-208ENST00000443477 TDRD9Q8NDG6 1382 aaKnown RBP28.07■■■□□ 2.08
RHBDD1-208ENST00000443477 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
RHBDD1-208ENST00000443477 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
RHBDD1-208ENST00000443477 FBLN2P98095 1184 aa27.99■■■□□ 2.07
RHBDD1-208ENST00000443477 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.06
RHBDD1-208ENST00000443477 GRIN2BQ13224 1484 aa27.89■■■□□ 2.06
RHBDD1-208ENST00000443477 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.06
RHBDD1-208ENST00000443477 CYB5RLQ6IPT4 315 aa27.86■■■□□ 2.05
RHBDD1-208ENST00000443477 CHMP7Q8WUX9 453 aaPredicted RBP27.83■■■□□ 2.05
RHBDD1-208ENST00000443477 ARAP1Q96P48 1450 aa27.83■■■□□ 2.04
RHBDD1-208ENST00000443477 GAPVD1Q14C86 1478 aa27.81■■■□□ 2.04
RHBDD1-208ENST00000443477 CLASP1Q7Z460 1538 aa27.81■■■□□ 2.04
RHBDD1-208ENST00000443477 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
RHBDD1-208ENST00000443477 SYNJ2O15056 1496 aa27.8■■■□□ 2.04
RHBDD1-208ENST00000443477 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
RHBDD1-208ENST00000443477 PBRM1Q86U86 1689 aa27.75■■■□□ 2.03
RHBDD1-208ENST00000443477 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
RHBDD1-208ENST00000443477 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
RHBDD1-208ENST00000443477 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
RHBDD1-208ENST00000443477 BIVM-ERCC5R4GMW8 1640 aa27.66■■■□□ 2.02
RHBDD1-208ENST00000443477 GRIN2AQ12879 1464 aa27.54■■■□□ 2
RHBDD1-208ENST00000443477 ADAMTS12P58397 1594 aa27.52■■■□□ 2
RHBDD1-208ENST00000443477 TRHP20396 242 aaPredicted RBP27.5■■□□□ 1.99
RHBDD1-208ENST00000443477 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
RHBDD1-208ENST00000443477 NUP160Q12769 1436 aa27.47■■□□□ 1.99
RHBDD1-208ENST00000443477 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
RHBDD1-208ENST00000443477 CEP170Q5SW79 1584 aa27.43■■□□□ 1.98
RHBDD1-208ENST00000443477 ERCC6L2Q5T890 1561 aa27.35■■□□□ 1.97
RHBDD1-208ENST00000443477 SHROOM2Q13796 1616 aa27.32■■□□□ 1.96
RHBDD1-208ENST00000443477 PRG4Q92954 1404 aaPredicted RBP27.16■■□□□ 1.94
RHBDD1-208ENST00000443477 JPH4Q96JJ6 628 aa27.16■■□□□ 1.94
RHBDD1-208ENST00000443477 RUSC2Q8N2Y8 1516 aa27.13■■□□□ 1.93
RHBDD1-208ENST00000443477 KIF27Q86VH2 1401 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms