RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 NISCHQ9Y2I1 1504 aa32.01■■■□□ 2.72
TOM1-208ENST00000443206 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
TOM1-208ENST00000443206 ABCC9O60706 1549 aa28.11■■■□□ 2.09
TOM1-208ENST00000443206 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
TOM1-208ENST00000443206 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
TOM1-208ENST00000443206 NACADO15069 1562 aa26.89■■□□□ 1.9
TOM1-208ENST00000443206 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
TOM1-208ENST00000443206 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
TOM1-208ENST00000443206 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
TOM1-208ENST00000443206 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
TOM1-208ENST00000443206 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
TOM1-208ENST00000443206 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
TOM1-208ENST00000443206 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
TOM1-208ENST00000443206 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
TOM1-208ENST00000443206 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
TOM1-208ENST00000443206 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
TOM1-208ENST00000443206 CC2D2AQ9P2K1 1620 aa25.41■■□□□ 1.66
TOM1-208ENST00000443206 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
TOM1-208ENST00000443206 SMARCA4P51532 1647 aa24.87■■□□□ 1.57
TOM1-208ENST00000443206 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
TOM1-208ENST00000443206 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
TOM1-208ENST00000443206 ATAD2BQ9ULI0 1458 aa24.78■■□□□ 1.56
TOM1-208ENST00000443206 SMARCA2P51531 1590 aa24.77■■□□□ 1.56
TOM1-208ENST00000443206 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
TOM1-208ENST00000443206 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
TOM1-208ENST00000443206 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
TOM1-208ENST00000443206 BAZ1BQ9UIG0 1483 aaKnown RBP24.59■■□□□ 1.53
TOM1-208ENST00000443206 WIZO95785 1651 aa24.4■■□□□ 1.5
TOM1-208ENST00000443206 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
TOM1-208ENST00000443206 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
TOM1-208ENST00000443206 NESP48681 1621 aa24.26■■□□□ 1.47
TOM1-208ENST00000443206 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
TOM1-208ENST00000443206 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
TOM1-208ENST00000443206 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
TOM1-208ENST00000443206 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
TOM1-208ENST00000443206 CUX2O14529 1486 aa24.06■■□□□ 1.44
TOM1-208ENST00000443206 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
TOM1-208ENST00000443206 THOC2Q8NI27 1593 aaKnown RBP23.91■■□□□ 1.42
TOM1-208ENST00000443206 CFTRP13569 1480 aa23.89■■□□□ 1.42
TOM1-208ENST00000443206 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
TOM1-208ENST00000443206 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
TOM1-208ENST00000443206 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
TOM1-208ENST00000443206 MRC2Q9UBG0 1479 aa23.79■■□□□ 1.4
TOM1-208ENST00000443206 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
TOM1-208ENST00000443206 WDR62O43379 1518 aa23.69■■□□□ 1.38
TOM1-208ENST00000443206 SUPT5HO00267 1087 aaKnown RBP23.66■■□□□ 1.38
TOM1-208ENST00000443206 URB2Q14146 1524 aaKnown RBP23.56■■□□□ 1.36
TOM1-208ENST00000443206 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
TOM1-208ENST00000443206 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
TOM1-208ENST00000443206 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
TOM1-208ENST00000443206 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
TOM1-208ENST00000443206 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
TOM1-208ENST00000443206 ZNF608Q9ULD9 1512 aaPredicted RBP23.19■■□□□ 1.3
TOM1-208ENST00000443206 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
TOM1-208ENST00000443206 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
TOM1-208ENST00000443206 CUX1P39880 1505 aa23.14■■□□□ 1.3
TOM1-208ENST00000443206 SOGA1O94964 1423 aa23.13■■□□□ 1.29
TOM1-208ENST00000443206 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
TOM1-208ENST00000443206 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
TOM1-208ENST00000443206 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
TOM1-208ENST00000443206 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
TOM1-208ENST00000443206 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.28
TOM1-208ENST00000443206 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
TOM1-208ENST00000443206 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
TOM1-208ENST00000443206 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
TOM1-208ENST00000443206 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
TOM1-208ENST00000443206 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
TOM1-208ENST00000443206 FBLN2P98095 1184 aa22.9■■□□□ 1.26
TOM1-208ENST00000443206 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
TOM1-208ENST00000443206 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
TOM1-208ENST00000443206 CHD1O14646 1710 aa22.87■■□□□ 1.25
TOM1-208ENST00000443206 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
TOM1-208ENST00000443206 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
TOM1-208ENST00000443206 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
TOM1-208ENST00000443206 MAGI1Q96QZ7 1491 aaPredicted RBP22.81■■□□□ 1.24
TOM1-208ENST00000443206 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
TOM1-208ENST00000443206 PBRM1Q86U86 1689 aa22.8■■□□□ 1.24
TOM1-208ENST00000443206 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
TOM1-208ENST00000443206 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
TOM1-208ENST00000443206 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
TOM1-208ENST00000443206 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
TOM1-208ENST00000443206 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
TOM1-208ENST00000443206 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
TOM1-208ENST00000443206 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
TOM1-208ENST00000443206 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
TOM1-208ENST00000443206 ADAMTS12P58397 1594 aa22.58■■□□□ 1.2
TOM1-208ENST00000443206 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
TOM1-208ENST00000443206 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
TOM1-208ENST00000443206 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
TOM1-208ENST00000443206 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
TOM1-208ENST00000443206 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
TOM1-208ENST00000443206 NUP160Q12769 1436 aa22.44■■□□□ 1.18
TOM1-208ENST00000443206 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
TOM1-208ENST00000443206 IGF1RP08069 1367 aa22.43■■□□□ 1.18
TOM1-208ENST00000443206 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
TOM1-208ENST00000443206 CUL7Q14999 1698 aa22.38■■□□□ 1.17
TOM1-208ENST00000443206 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
TOM1-208ENST00000443206 SHROOM2Q13796 1616 aa22.29■■□□□ 1.16
TOM1-208ENST00000443206 JPH4Q96JJ6 628 aa22.29■■□□□ 1.16
TOM1-208ENST00000443206 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms