RNA–Protein interactions for RNA: ENST00000442952.1

SEC23IP-202, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-202ENST00000442952 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
SEC23IP-202ENST00000442952 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
SEC23IP-202ENST00000442952 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
SEC23IP-202ENST00000442952 ABCC9O60706 1549 aa19.1■□□□□ 0.65
SEC23IP-202ENST00000442952 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
SEC23IP-202ENST00000442952 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
SEC23IP-202ENST00000442952 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
SEC23IP-202ENST00000442952 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
SEC23IP-202ENST00000442952 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
SEC23IP-202ENST00000442952 NACADO15069 1562 aa18■□□□□ 0.47
SEC23IP-202ENST00000442952 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
SEC23IP-202ENST00000442952 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
SEC23IP-202ENST00000442952 DCAF8L2P0C7V8 631 aa17.69■□□□□ 0.42
SEC23IP-202ENST00000442952 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
SEC23IP-202ENST00000442952 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
SEC23IP-202ENST00000442952 SHROOM4Q9ULL8 1493 aa17.44■□□□□ 0.38
SEC23IP-202ENST00000442952 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
SEC23IP-202ENST00000442952 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
SEC23IP-202ENST00000442952 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.36
SEC23IP-202ENST00000442952 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
SEC23IP-202ENST00000442952 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
SEC23IP-202ENST00000442952 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
SEC23IP-202ENST00000442952 FOXD1Q16676 465 aa16.98■□□□□ 0.31
SEC23IP-202ENST00000442952 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
SEC23IP-202ENST00000442952 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
SEC23IP-202ENST00000442952 CUX2O14529 1486 aa16.59■□□□□ 0.25
SEC23IP-202ENST00000442952 ERCC6Q03468 1493 aa16.52■□□□□ 0.23
SEC23IP-202ENST00000442952 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
SEC23IP-202ENST00000442952 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
SEC23IP-202ENST00000442952 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
SEC23IP-202ENST00000442952 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
SEC23IP-202ENST00000442952 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
SEC23IP-202ENST00000442952 BAZ1AQ9NRL2 1556 aaPredicted RBP16.37■□□□□ 0.21
SEC23IP-202ENST00000442952 NESP48681 1621 aa16.35■□□□□ 0.21
SEC23IP-202ENST00000442952 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
SEC23IP-202ENST00000442952 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
SEC23IP-202ENST00000442952 THOC2Q8NI27 1593 aaKnown RBP16.29■□□□□ 0.2
SEC23IP-202ENST00000442952 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
SEC23IP-202ENST00000442952 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
SEC23IP-202ENST00000442952 KIF21AQ7Z4S6 1674 aa16.16■□□□□ 0.18
SEC23IP-202ENST00000442952 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
SEC23IP-202ENST00000442952 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
SEC23IP-202ENST00000442952 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
SEC23IP-202ENST00000442952 WDR62O43379 1518 aa16.03■□□□□ 0.16
SEC23IP-202ENST00000442952 ADRA2BP18089 450 aa16.01■□□□□ 0.15
SEC23IP-202ENST00000442952 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
SEC23IP-202ENST00000442952 WIZO95785 1651 aa15.99■□□□□ 0.15
SEC23IP-202ENST00000442952 PIAS4Q8N2W9 510 aaPredicted RBP15.96■□□□□ 0.15
SEC23IP-202ENST00000442952 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
SEC23IP-202ENST00000442952 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
SEC23IP-202ENST00000442952 CFTRP13569 1480 aa15.87■□□□□ 0.13
SEC23IP-202ENST00000442952 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
SEC23IP-202ENST00000442952 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
SEC23IP-202ENST00000442952 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
SEC23IP-202ENST00000442952 MSH5O43196 834 aa15.79■□□□□ 0.12
SEC23IP-202ENST00000442952 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
SEC23IP-202ENST00000442952 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
SEC23IP-202ENST00000442952 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
SEC23IP-202ENST00000442952 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
SEC23IP-202ENST00000442952 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
SEC23IP-202ENST00000442952 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
SEC23IP-202ENST00000442952 RIMBP3CA6NJZ7 1639 aa15.59■□□□□ 0.09
SEC23IP-202ENST00000442952 RIMBP3BA6NNM3 1639 aa15.59■□□□□ 0.09
SEC23IP-202ENST00000442952 RIMBP3Q9UFD9 1639 aa15.59■□□□□ 0.09
SEC23IP-202ENST00000442952 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
SEC23IP-202ENST00000442952 ABCC8Q09428 1581 aa15.54■□□□□ 0.08
SEC23IP-202ENST00000442952 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
SEC23IP-202ENST00000442952 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
SEC23IP-202ENST00000442952 DNMBPQ6XZF7 1577 aa15.52■□□□□ 0.07
SEC23IP-202ENST00000442952 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.06
SEC23IP-202ENST00000442952 CHD1O14646 1710 aa15.43■□□□□ 0.06
SEC23IP-202ENST00000442952 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.06
SEC23IP-202ENST00000442952 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
SEC23IP-202ENST00000442952 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
SEC23IP-202ENST00000442952 CYB5RLQ6IPT4 315 aa15.34■□□□□ 0.05
SEC23IP-202ENST00000442952 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
SEC23IP-202ENST00000442952 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
SEC23IP-202ENST00000442952 SOGA1O94964 1423 aa15.3■□□□□ 0.04
SEC23IP-202ENST00000442952 FBLN2P98095 1184 aa15.29■□□□□ 0.04
SEC23IP-202ENST00000442952 CLASP1Q7Z460 1538 aa15.28■□□□□ 0.04
SEC23IP-202ENST00000442952 SNAPC4Q5SXM2 1469 aa15.28■□□□□ 0.04
SEC23IP-202ENST00000442952 FGD5Q6ZNL6 1462 aa15.28■□□□□ 0.04
SEC23IP-202ENST00000442952 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
SEC23IP-202ENST00000442952 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.03
SEC23IP-202ENST00000442952 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
SEC23IP-202ENST00000442952 CUX1P39880 1505 aa15.24■□□□□ 0.03
SEC23IP-202ENST00000442952 GRIN2BQ13224 1484 aa15.22■□□□□ 0.03
SEC23IP-202ENST00000442952 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
SEC23IP-202ENST00000442952 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
SEC23IP-202ENST00000442952 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
SEC23IP-202ENST00000442952 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
SEC23IP-202ENST00000442952 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
SEC23IP-202ENST00000442952 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
SEC23IP-202ENST00000442952 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
SEC23IP-202ENST00000442952 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
SEC23IP-202ENST00000442952 GRIN2AQ12879 1464 aa15.03■□□□□ -0
SEC23IP-202ENST00000442952 ADAMTS12P58397 1594 aa15.02■□□□□ -0
SEC23IP-202ENST00000442952 NUP160Q12769 1436 aa15□□□□□ -0.01
SEC23IP-202ENST00000442952 WRNQ14191 1432 aaPredicted RBP eCLIP15□□□□□ -0.01
SEC23IP-202ENST00000442952 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms