RNA–Protein interactions for RNA: ENST00000442937.5

LINC00578-202, long intergenic non-protein coding RNA 578, humanhuman

TSL 3 BASIC

Gene LINC00578, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-202ENST00000442937 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
LINC00578-202ENST00000442937 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
LINC00578-202ENST00000442937 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
LINC00578-202ENST00000442937 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
LINC00578-202ENST00000442937 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
LINC00578-202ENST00000442937 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
LINC00578-202ENST00000442937 ABCC9O60706 1549 aa16.12■□□□□ 0.17
LINC00578-202ENST00000442937 FOXD1Q16676 465 aa15.59■□□□□ 0.09
LINC00578-202ENST00000442937 NACADO15069 1562 aa15.49■□□□□ 0.07
LINC00578-202ENST00000442937 RB1CC1Q8TDY2 1594 aa15.48■□□□□ 0.07
LINC00578-202ENST00000442937 MYO15BQ96JP2 1530 aa15.47■□□□□ 0.07
LINC00578-202ENST00000442937 DCAF8L2P0C7V8 631 aa15.45■□□□□ 0.06
LINC00578-202ENST00000442937 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
LINC00578-202ENST00000442937 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
LINC00578-202ENST00000442937 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
LINC00578-202ENST00000442937 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
LINC00578-202ENST00000442937 BICRAQ9NZM4 1560 aa15.05■□□□□ -0
LINC00578-202ENST00000442937 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
LINC00578-202ENST00000442937 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
LINC00578-202ENST00000442937 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
LINC00578-202ENST00000442937 SHROOM4Q9ULL8 1493 aa14.93□□□□□ -0.02
LINC00578-202ENST00000442937 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
LINC00578-202ENST00000442937 MSH5O43196 834 aa14.69□□□□□ -0.06
LINC00578-202ENST00000442937 PPP6R1Q9UPN7 881 aa14.66□□□□□ -0.06
LINC00578-202ENST00000442937 EIF4G1Q04637 1599 aaKnown RBP14.63□□□□□ -0.07
LINC00578-202ENST00000442937 ADRA2BP18089 450 aa14.62□□□□□ -0.07
LINC00578-202ENST00000442937 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
LINC00578-202ENST00000442937 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
LINC00578-202ENST00000442937 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.08
LINC00578-202ENST00000442937 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
LINC00578-202ENST00000442937 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
LINC00578-202ENST00000442937 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
LINC00578-202ENST00000442937 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
LINC00578-202ENST00000442937 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
LINC00578-202ENST00000442937 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
LINC00578-202ENST00000442937 PEG3Q9GZU2 1588 aa14.24□□□□□ -0.13
LINC00578-202ENST00000442937 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
LINC00578-202ENST00000442937 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
LINC00578-202ENST00000442937 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
LINC00578-202ENST00000442937 WIZO95785 1651 aa14.01□□□□□ -0.17
LINC00578-202ENST00000442937 NESP48681 1621 aa13.94□□□□□ -0.18
LINC00578-202ENST00000442937 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
LINC00578-202ENST00000442937 LAMC3Q9Y6N6 1575 aa13.9□□□□□ -0.18
LINC00578-202ENST00000442937 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.19
LINC00578-202ENST00000442937 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
LINC00578-202ENST00000442937 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
LINC00578-202ENST00000442937 CFTRP13569 1480 aa13.83□□□□□ -0.2
LINC00578-202ENST00000442937 CUX2O14529 1486 aa13.81□□□□□ -0.2
LINC00578-202ENST00000442937 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
LINC00578-202ENST00000442937 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
LINC00578-202ENST00000442937 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
LINC00578-202ENST00000442937 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
LINC00578-202ENST00000442937 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
LINC00578-202ENST00000442937 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
LINC00578-202ENST00000442937 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
LINC00578-202ENST00000442937 WDR62O43379 1518 aa13.63□□□□□ -0.23
LINC00578-202ENST00000442937 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
LINC00578-202ENST00000442937 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
LINC00578-202ENST00000442937 ABCC8Q09428 1581 aa13.52□□□□□ -0.25
LINC00578-202ENST00000442937 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
LINC00578-202ENST00000442937 TOPBP1Q92547 1522 aa13.48□□□□□ -0.25
LINC00578-202ENST00000442937 IFT140Q96RY7 1462 aa13.43□□□□□ -0.26
LINC00578-202ENST00000442937 DNMBPQ6XZF7 1577 aa13.43□□□□□ -0.26
LINC00578-202ENST00000442937 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
LINC00578-202ENST00000442937 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
LINC00578-202ENST00000442937 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
LINC00578-202ENST00000442937 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
LINC00578-202ENST00000442937 CUX1P39880 1505 aa13.34□□□□□ -0.27
LINC00578-202ENST00000442937 SOGA1O94964 1423 aa13.34□□□□□ -0.27
LINC00578-202ENST00000442937 TARBP1Q13395 1621 aaKnown RBP13.32□□□□□ -0.28
LINC00578-202ENST00000442937 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
LINC00578-202ENST00000442937 RAD54L2Q9Y4B4 1467 aa13.3□□□□□ -0.28
LINC00578-202ENST00000442937 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
LINC00578-202ENST00000442937 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00578-202ENST00000442937 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
LINC00578-202ENST00000442937 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.29
LINC00578-202ENST00000442937 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
LINC00578-202ENST00000442937 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
LINC00578-202ENST00000442937 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
LINC00578-202ENST00000442937 EIF4G3O43432 1585 aaKnown RBP13.21□□□□□ -0.29
LINC00578-202ENST00000442937 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
LINC00578-202ENST00000442937 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
LINC00578-202ENST00000442937 PPP4R3CPQ6ZMV5 832 aa13.17□□□□□ -0.3
LINC00578-202ENST00000442937 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
LINC00578-202ENST00000442937 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
LINC00578-202ENST00000442937 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
LINC00578-202ENST00000442937 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
LINC00578-202ENST00000442937 CHMP7Q8WUX9 453 aaPredicted RBP13.12□□□□□ -0.31
LINC00578-202ENST00000442937 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
LINC00578-202ENST00000442937 FBLN2P98095 1184 aa13.11□□□□□ -0.31
LINC00578-202ENST00000442937 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
LINC00578-202ENST00000442937 SYNJ2O15056 1496 aa13.09□□□□□ -0.31
LINC00578-202ENST00000442937 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
LINC00578-202ENST00000442937 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
LINC00578-202ENST00000442937 IGF1RP08069 1367 aa13.03□□□□□ -0.32
LINC00578-202ENST00000442937 CHD1O14646 1710 aa13.01□□□□□ -0.33
LINC00578-202ENST00000442937 KIF27Q86VH2 1401 aa13□□□□□ -0.33
LINC00578-202ENST00000442937 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
LINC00578-202ENST00000442937 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
LINC00578-202ENST00000442937 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms