RNA–Protein interactions for RNA: ENST00000442929.1

FAM3A-214, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-214ENST00000442929 NISCHQ9Y2I1 1504 aa45.68■■■■■ 4.9
FAM3A-214ENST00000442929 CCDC180Q9P1Z9 1646 aa40.7■■■■■ 4.11
FAM3A-214ENST00000442929 ABCC9O60706 1549 aa39.24■■■■□ 3.87
FAM3A-214ENST00000442929 ZCCHC6Q5VYS8 1495 aaKnown RBP38.14■■■■□ 3.7
FAM3A-214ENST00000442929 NACADO15069 1562 aa38.09■■■■□ 3.69
FAM3A-214ENST00000442929 RB1CC1Q8TDY2 1594 aa38.08■■■■□ 3.69
FAM3A-214ENST00000442929 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
FAM3A-214ENST00000442929 DCAF8L2P0C7V8 631 aa37.9■■■■□ 3.66
FAM3A-214ENST00000442929 DCAF1Q9Y4B6 1507 aa37.9■■■■□ 3.66
FAM3A-214ENST00000442929 UNC13AQ9UPW8 1703 aa37.24■■■■□ 3.55
FAM3A-214ENST00000442929 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
FAM3A-214ENST00000442929 DNAJC5BQ9UF47 199 aa36.79■■■■□ 3.48
FAM3A-214ENST00000442929 BICRAQ9NZM4 1560 aa36.77■■■■□ 3.48
FAM3A-214ENST00000442929 SHROOM4Q9ULL8 1493 aa36.62■■■■□ 3.45
FAM3A-214ENST00000442929 PABPN1Q86U42 306 aaKnown RBP eCLIP36.6■■■■□ 3.45
FAM3A-214ENST00000442929 EIF4G1Q04637 1599 aaKnown RBP35.84■■■■□ 3.33
FAM3A-214ENST00000442929 CC2D2AQ9P2K1 1620 aa35.61■■■■□ 3.29
FAM3A-214ENST00000442929 BAZ1AQ9NRL2 1556 aaPredicted RBP35.47■■■■□ 3.27
FAM3A-214ENST00000442929 SMARCA4P51532 1647 aa35.45■■■■□ 3.27
FAM3A-214ENST00000442929 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
FAM3A-214ENST00000442929 SMARCA2P51531 1590 aa35.2■■■■□ 3.23
FAM3A-214ENST00000442929 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
FAM3A-214ENST00000442929 PEG3Q9GZU2 1588 aa35.11■■■■□ 3.21
FAM3A-214ENST00000442929 ATAD2BQ9ULI0 1458 aa35.07■■■■□ 3.2
FAM3A-214ENST00000442929 NCAPD3P42695 1498 aa35.03■■■■□ 3.2
FAM3A-214ENST00000442929 HMGXB3Q12766 1538 aa35.01■■■■□ 3.19
FAM3A-214ENST00000442929 BAZ1BQ9UIG0 1483 aaKnown RBP34.89■■■■□ 3.18
FAM3A-214ENST00000442929 WIZO95785 1651 aa34.86■■■■□ 3.17
FAM3A-214ENST00000442929 RSF1Q96T23 1441 aaPredicted RBP34.83■■■■□ 3.17
FAM3A-214ENST00000442929 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
FAM3A-214ENST00000442929 DNAJC5Q9H3Z4 198 aa34.53■■■■□ 3.12
FAM3A-214ENST00000442929 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
FAM3A-214ENST00000442929 SUPT5HO00267 1087 aaKnown RBP34.12■■■■□ 3.05
FAM3A-214ENST00000442929 CCDC88BA6NC98 1476 aa34.02■■■■□ 3.04
FAM3A-214ENST00000442929 NESP48681 1621 aa34.01■■■■□ 3.04
FAM3A-214ENST00000442929 CADPSQ9ULU8 1353 aa34■■■■□ 3.03
FAM3A-214ENST00000442929 PRDM2Q13029 1718 aa33.96■■■■□ 3.03
FAM3A-214ENST00000442929 ERCC6Q03468 1493 aa33.93■■■■□ 3.02
FAM3A-214ENST00000442929 CFTRP13569 1480 aa33.89■■■■□ 3.02
FAM3A-214ENST00000442929 PDS5BQ9NTI5 1447 aa33.88■■■■□ 3.01
FAM3A-214ENST00000442929 KIF21AQ7Z4S6 1674 aa33.82■■■■□ 3
FAM3A-214ENST00000442929 FANCD2Q9BXW9 1451 aa33.65■■■□□ 2.98
FAM3A-214ENST00000442929 CEP164Q9UPV0 1460 aa33.65■■■□□ 2.98
FAM3A-214ENST00000442929 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
FAM3A-214ENST00000442929 MRC2Q9UBG0 1479 aa33.51■■■□□ 2.96
FAM3A-214ENST00000442929 CUX2O14529 1486 aa33.48■■■□□ 2.95
FAM3A-214ENST00000442929 WDR62O43379 1518 aa33.41■■■□□ 2.94
FAM3A-214ENST00000442929 ABCC8Q09428 1581 aa33.29■■■□□ 2.92
FAM3A-214ENST00000442929 URB2Q14146 1524 aaKnown RBP33.25■■■□□ 2.91
FAM3A-214ENST00000442929 DNMBPQ6XZF7 1577 aa33.22■■■□□ 2.91
FAM3A-214ENST00000442929 TOPBP1Q92547 1522 aa33.15■■■□□ 2.9
FAM3A-214ENST00000442929 CUX1P39880 1505 aa32.98■■■□□ 2.87
FAM3A-214ENST00000442929 BIVM-ERCC5R4GMW8 1640 aa32.92■■■□□ 2.86
FAM3A-214ENST00000442929 WRNQ14191 1432 aaPredicted RBP eCLIP32.92■■■□□ 2.86
FAM3A-214ENST00000442929 IFT140Q96RY7 1462 aa32.91■■■□□ 2.86
FAM3A-214ENST00000442929 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
FAM3A-214ENST00000442929 POLA1P09884 1462 aaPredicted RBP32.87■■■□□ 2.85
FAM3A-214ENST00000442929 FGD5Q6ZNL6 1462 aa32.85■■■□□ 2.85
FAM3A-214ENST00000442929 SYNJ1O43426 1573 aa32.82■■■□□ 2.84
FAM3A-214ENST00000442929 TARBP1Q13395 1621 aaKnown RBP32.8■■■□□ 2.84
FAM3A-214ENST00000442929 WDR97A6NE52 1622 aa32.73■■■□□ 2.83
FAM3A-214ENST00000442929 SOGA1O94964 1423 aa32.72■■■□□ 2.83
FAM3A-214ENST00000442929 EIF4G3O43432 1585 aaKnown RBP32.66■■■□□ 2.82
FAM3A-214ENST00000442929 RAD54L2Q9Y4B4 1467 aa32.65■■■□□ 2.82
FAM3A-214ENST00000442929 ZNF608Q9ULD9 1512 aaPredicted RBP32.6■■■□□ 2.81
FAM3A-214ENST00000442929 ABCA10Q8WWZ4 1543 aa32.57■■■□□ 2.8
FAM3A-214ENST00000442929 TRIM41Q8WV44 630 aa32.56■■■□□ 2.8
FAM3A-214ENST00000442929 ABCA5Q8WWZ7 1642 aa32.47■■■□□ 2.79
FAM3A-214ENST00000442929 PBRM1Q86U86 1689 aa32.46■■■□□ 2.79
FAM3A-214ENST00000442929 AQRO60306 1485 aaKnown RBP eCLIP32.45■■■□□ 2.795e-8■■■□□ 14.6
FAM3A-214ENST00000442929 TDRD9Q8NDG6 1382 aaKnown RBP32.43■■■□□ 2.78
FAM3A-214ENST00000442929 GAPVD1Q14C86 1478 aa32.41■■■□□ 2.78
FAM3A-214ENST00000442929 GRIN2BQ13224 1484 aa32.37■■■□□ 2.77
FAM3A-214ENST00000442929 MAGI1Q96QZ7 1491 aaPredicted RBP32.3■■■□□ 2.76
FAM3A-214ENST00000442929 SNAPC4Q5SXM2 1469 aa32.26■■■□□ 2.75
FAM3A-214ENST00000442929 ERICH3Q5RHP9 1530 aa32.26■■■□□ 2.75
FAM3A-214ENST00000442929 KIF27Q86VH2 1401 aa32.24■■■□□ 2.75
FAM3A-214ENST00000442929 CHD1O14646 1710 aa32.23■■■□□ 2.75
FAM3A-214ENST00000442929 SYNJ2O15056 1496 aa32.14■■■□□ 2.74
FAM3A-214ENST00000442929 ADAMTS12P58397 1594 aa32.14■■■□□ 2.74
FAM3A-214ENST00000442929 CUL7Q14999 1698 aa32.11■■■□□ 2.73
FAM3A-214ENST00000442929 FHAD1B1AJZ9 1412 aa32.04■■■□□ 2.72
FAM3A-214ENST00000442929 FBLN2P98095 1184 aa32.03■■■□□ 2.72
FAM3A-214ENST00000442929 CHMP7Q8WUX9 453 aaPredicted RBP32.03■■■□□ 2.72
FAM3A-214ENST00000442929 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
FAM3A-214ENST00000442929 CHIC1Q5VXU3 224 aa32■■■□□ 2.71
FAM3A-214ENST00000442929 GRIN2AQ12879 1464 aa31.95■■■□□ 2.7
FAM3A-214ENST00000442929 IGF1RP08069 1367 aa31.93■■■□□ 2.7
FAM3A-214ENST00000442929 EEA1Q15075 1411 aa31.9■■■□□ 2.7
FAM3A-214ENST00000442929 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
FAM3A-214ENST00000442929 CARMIL1Q5VZK9 1371 aa31.81■■■□□ 2.68
FAM3A-214ENST00000442929 CLASP1Q7Z460 1538 aa31.8■■■□□ 2.68
FAM3A-214ENST00000442929 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
FAM3A-214ENST00000442929 NUP160Q12769 1436 aa31.76■■■□□ 2.68
FAM3A-214ENST00000442929 RAPGEF2Q9Y4G8 1499 aa31.72■■■□□ 2.67
FAM3A-214ENST00000442929 CSRNP3Q8WYN3 585 aa31.63■■■□□ 2.65
FAM3A-214ENST00000442929 PRXQ9BXM0 1461 aa31.63■■■□□ 2.65
FAM3A-214ENST00000442929 CTTNBP2Q8WZ74 1663 aa31.59■■■□□ 2.65
FAM3A-214ENST00000442929 SHROOM2Q13796 1616 aa31.57■■■□□ 2.64
FAM3A-214ENST00000442929 RIMBP3CA6NJZ7 1639 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms