RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
SLC48A1-202ENST00000442892 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.78
SLC48A1-202ENST00000442892 ABCC9O60706 1549 aa25.58■■□□□ 1.69
SLC48A1-202ENST00000442892 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
SLC48A1-202ENST00000442892 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
SLC48A1-202ENST00000442892 NACADO15069 1562 aa24.52■■□□□ 1.52
SLC48A1-202ENST00000442892 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
SLC48A1-202ENST00000442892 MYO15BQ96JP2 1530 aa24.29■■□□□ 1.48
SLC48A1-202ENST00000442892 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
SLC48A1-202ENST00000442892 UNC13AQ9UPW8 1703 aa24.11■■□□□ 1.45
SLC48A1-202ENST00000442892 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
SLC48A1-202ENST00000442892 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
SLC48A1-202ENST00000442892 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
SLC48A1-202ENST00000442892 SHROOM4Q9ULL8 1493 aa23.48■■□□□ 1.35
SLC48A1-202ENST00000442892 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
SLC48A1-202ENST00000442892 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
SLC48A1-202ENST00000442892 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
SLC48A1-202ENST00000442892 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
SLC48A1-202ENST00000442892 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
SLC48A1-202ENST00000442892 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
SLC48A1-202ENST00000442892 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
SLC48A1-202ENST00000442892 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
SLC48A1-202ENST00000442892 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
SLC48A1-202ENST00000442892 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
SLC48A1-202ENST00000442892 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
SLC48A1-202ENST00000442892 HMGXB3Q12766 1538 aa22.52■■□□□ 1.2
SLC48A1-202ENST00000442892 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
SLC48A1-202ENST00000442892 WIZO95785 1651 aa22.51■■□□□ 1.19
SLC48A1-202ENST00000442892 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
SLC48A1-202ENST00000442892 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
SLC48A1-202ENST00000442892 NESP48681 1621 aa22.14■■□□□ 1.14
SLC48A1-202ENST00000442892 ERCC6Q03468 1493 aa22.08■■□□□ 1.12
SLC48A1-202ENST00000442892 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
SLC48A1-202ENST00000442892 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
SLC48A1-202ENST00000442892 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
SLC48A1-202ENST00000442892 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
SLC48A1-202ENST00000442892 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
SLC48A1-202ENST00000442892 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
SLC48A1-202ENST00000442892 CFTRP13569 1480 aa21.83■■□□□ 1.08
SLC48A1-202ENST00000442892 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
SLC48A1-202ENST00000442892 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
SLC48A1-202ENST00000442892 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.07
SLC48A1-202ENST00000442892 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
SLC48A1-202ENST00000442892 CUX2O14529 1486 aa21.71■■□□□ 1.07
SLC48A1-202ENST00000442892 MRC2Q9UBG0 1479 aa21.69■■□□□ 1.06
SLC48A1-202ENST00000442892 WDR62O43379 1518 aa21.59■■□□□ 1.05
SLC48A1-202ENST00000442892 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
SLC48A1-202ENST00000442892 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
SLC48A1-202ENST00000442892 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
SLC48A1-202ENST00000442892 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
SLC48A1-202ENST00000442892 CUX1P39880 1505 aa21.29■■□□□ 1
SLC48A1-202ENST00000442892 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
SLC48A1-202ENST00000442892 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
SLC48A1-202ENST00000442892 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
SLC48A1-202ENST00000442892 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
SLC48A1-202ENST00000442892 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
SLC48A1-202ENST00000442892 WRNQ14191 1432 aaPredicted RBP eCLIP21.17■□□□□ 0.98
SLC48A1-202ENST00000442892 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
SLC48A1-202ENST00000442892 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
SLC48A1-202ENST00000442892 SOGA1O94964 1423 aa21.15■□□□□ 0.98
SLC48A1-202ENST00000442892 EIF4G3O43432 1585 aaKnown RBP21.14■□□□□ 0.98
SLC48A1-202ENST00000442892 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
SLC48A1-202ENST00000442892 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
SLC48A1-202ENST00000442892 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
SLC48A1-202ENST00000442892 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
SLC48A1-202ENST00000442892 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
SLC48A1-202ENST00000442892 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
SLC48A1-202ENST00000442892 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
SLC48A1-202ENST00000442892 DNAJC5Q9H3Z4 198 aa20.94■□□□□ 0.94
SLC48A1-202ENST00000442892 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
SLC48A1-202ENST00000442892 CHD1O14646 1710 aa20.92■□□□□ 0.94
SLC48A1-202ENST00000442892 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
SLC48A1-202ENST00000442892 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
SLC48A1-202ENST00000442892 FBLN2P98095 1184 aa20.9■□□□□ 0.94
SLC48A1-202ENST00000442892 GRIN2BQ13224 1484 aa20.89■□□□□ 0.94
SLC48A1-202ENST00000442892 OSCARQ8IYS5 282 aa20.83■□□□□ 0.93
SLC48A1-202ENST00000442892 MAGI1Q96QZ7 1491 aaPredicted RBP20.82■□□□□ 0.92
SLC48A1-202ENST00000442892 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
SLC48A1-202ENST00000442892 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
SLC48A1-202ENST00000442892 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
SLC48A1-202ENST00000442892 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
SLC48A1-202ENST00000442892 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
SLC48A1-202ENST00000442892 KIF27Q86VH2 1401 aa20.72■□□□□ 0.91
SLC48A1-202ENST00000442892 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
SLC48A1-202ENST00000442892 GRIN2AQ12879 1464 aa20.63■□□□□ 0.89
SLC48A1-202ENST00000442892 CUL7Q14999 1698 aa20.61■□□□□ 0.89
SLC48A1-202ENST00000442892 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.88
SLC48A1-202ENST00000442892 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
SLC48A1-202ENST00000442892 IGF1RP08069 1367 aa20.57■□□□□ 0.88
SLC48A1-202ENST00000442892 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
SLC48A1-202ENST00000442892 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
SLC48A1-202ENST00000442892 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
SLC48A1-202ENST00000442892 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
SLC48A1-202ENST00000442892 ARHGEF11O15085 1522 aa20.53■□□□□ 0.88
SLC48A1-202ENST00000442892 CARMIL1Q5VZK9 1371 aa20.5■□□□□ 0.87
SLC48A1-202ENST00000442892 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
SLC48A1-202ENST00000442892 NUP160Q12769 1436 aa20.48■□□□□ 0.87
SLC48A1-202ENST00000442892 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
SLC48A1-202ENST00000442892 RAPGEF2Q9Y4G8 1499 aa20.39■□□□□ 0.85
SLC48A1-202ENST00000442892 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms