RNA–Protein interactions for RNA: ENST00000442845.1

EFHD1-206, Transcript of EF-hand domain family member D1, humanhuman

TSL 3

Gene EFHD1, Length 843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHD1-206ENST00000442845 NISCHQ9Y2I1 1504 aa50.72■■■■■ 5.71
EFHD1-206ENST00000442845 CCDC180Q9P1Z9 1646 aa45.22■■■■■ 4.83
EFHD1-206ENST00000442845 ABCC9O60706 1549 aa44.7■■■■■ 4.75
EFHD1-206ENST00000442845 DCAF8L2P0C7V8 631 aa42.8■■■■■ 4.44
EFHD1-206ENST00000442845 RB1CC1Q8TDY2 1594 aa42.78■■■■■ 4.44
EFHD1-206ENST00000442845 NACADO15069 1562 aa42.62■■■■■ 4.41
EFHD1-206ENST00000442845 MYO15BQ96JP2 1530 aa42.17■■■■■ 4.34
EFHD1-206ENST00000442845 ZCCHC6Q5VYS8 1495 aaKnown RBP42.12■■■■■ 4.33
EFHD1-206ENST00000442845 DCAF1Q9Y4B6 1507 aa41.88■■■■■ 4.29
EFHD1-206ENST00000442845 UNC13AQ9UPW8 1703 aa41.85■■■■■ 4.29
EFHD1-206ENST00000442845 PABPN1Q86U42 306 aaKnown RBP eCLIP41.78■■■■■ 4.28
EFHD1-206ENST00000442845 BICRAQ9NZM4 1560 aa41.46■■■■■ 4.23
EFHD1-206ENST00000442845 DNAJC5BQ9UF47 199 aa41.36■■■■■ 4.21
EFHD1-206ENST00000442845 SCRIBQ14160 1630 aa41.32■■■■■ 4.2
EFHD1-206ENST00000442845 SHROOM4Q9ULL8 1493 aa40.91■■■■■ 4.14
EFHD1-206ENST00000442845 EIF4G1Q04637 1599 aaKnown RBP40.42■■■■■ 4.06
EFHD1-206ENST00000442845 CC2D2AQ9P2K1 1620 aa40.38■■■■■ 4.05
EFHD1-206ENST00000442845 CECR2Q9BXF3 1484 aa40.17■■■■■ 4.02
EFHD1-206ENST00000442845 SMARCA4P51532 1647 aa39.43■■■■□ 3.9
EFHD1-206ENST00000442845 BAZ1AQ9NRL2 1556 aaPredicted RBP39.34■■■■□ 3.89
EFHD1-206ENST00000442845 NCAPD3P42695 1498 aa39.32■■■■□ 3.89
EFHD1-206ENST00000442845 ATAD2BQ9ULI0 1458 aa39.31■■■■□ 3.88
EFHD1-206ENST00000442845 SMARCA2P51531 1590 aa39.25■■■■□ 3.87
EFHD1-206ENST00000442845 MROH2BQ7Z745 1585 aa39.11■■■■□ 3.85
EFHD1-206ENST00000442845 HMGXB3Q12766 1538 aa39.06■■■■□ 3.84
EFHD1-206ENST00000442845 BAZ1BQ9UIG0 1483 aaKnown RBP38.99■■■■□ 3.83
EFHD1-206ENST00000442845 PEG3Q9GZU2 1588 aa38.99■■■■□ 3.83
EFHD1-206ENST00000442845 WIZO95785 1651 aa38.71■■■■□ 3.79
EFHD1-206ENST00000442845 ERCC6Q03468 1493 aa38.56■■■■□ 3.76
EFHD1-206ENST00000442845 NESP48681 1621 aa38.55■■■■□ 3.76
EFHD1-206ENST00000442845 RSF1Q96T23 1441 aaPredicted RBP38.53■■■■□ 3.76
EFHD1-206ENST00000442845 LAMC3Q9Y6N6 1575 aa38.36■■■■□ 3.73
EFHD1-206ENST00000442845 TOP2AP11388 1531 aaKnown RBP38.21■■■■□ 3.71
EFHD1-206ENST00000442845 CADPSQ9ULU8 1353 aa38.2■■■■□ 3.71
EFHD1-206ENST00000442845 CUX2O14529 1486 aa38.19■■■■□ 3.7
EFHD1-206ENST00000442845 PDS5BQ9NTI5 1447 aa38.16■■■■□ 3.7
EFHD1-206ENST00000442845 KIF21AQ7Z4S6 1674 aa38.09■■■■□ 3.69
EFHD1-206ENST00000442845 THOC2Q8NI27 1593 aaKnown RBP37.97■■■■□ 3.67
EFHD1-206ENST00000442845 CFTRP13569 1480 aa37.86■■■■□ 3.65
EFHD1-206ENST00000442845 CCDC88BA6NC98 1476 aa37.82■■■■□ 3.64
EFHD1-206ENST00000442845 FANCD2Q9BXW9 1451 aa37.77■■■■□ 3.64
EFHD1-206ENST00000442845 MRC2Q9UBG0 1479 aa37.75■■■■□ 3.63
EFHD1-206ENST00000442845 CEP164Q9UPV0 1460 aa37.75■■■■□ 3.63
EFHD1-206ENST00000442845 WDR62O43379 1518 aa37.6■■■■□ 3.61
EFHD1-206ENST00000442845 PRDM2Q13029 1718 aa37.59■■■■□ 3.61
EFHD1-206ENST00000442845 DNAJC5Q9H3Z4 198 aa37.53■■■■□ 3.6
EFHD1-206ENST00000442845 SUPT5HO00267 1087 aaKnown RBP37.48■■■■□ 3.59
EFHD1-206ENST00000442845 URB2Q14146 1524 aaKnown RBP37.4■■■■□ 3.58
EFHD1-206ENST00000442845 TOPBP1Q92547 1522 aa37.11■■■■□ 3.53
EFHD1-206ENST00000442845 ABCC8Q09428 1581 aa37.11■■■■□ 3.53
EFHD1-206ENST00000442845 DNMBPQ6XZF7 1577 aa37.03■■■■□ 3.52
EFHD1-206ENST00000442845 IFT140Q96RY7 1462 aa36.97■■■■□ 3.51
EFHD1-206ENST00000442845 ZNF608Q9ULD9 1512 aaPredicted RBP36.85■■■■□ 3.49
EFHD1-206ENST00000442845 POLA1P09884 1462 aaPredicted RBP36.76■■■■□ 3.48
EFHD1-206ENST00000442845 TARBP1Q13395 1621 aaKnown RBP36.72■■■■□ 3.47
EFHD1-206ENST00000442845 CUX1P39880 1505 aa36.7■■■■□ 3.47
EFHD1-206ENST00000442845 SOGA1O94964 1423 aa36.68■■■■□ 3.46
EFHD1-206ENST00000442845 OSCARQ8IYS5 282 aa36.68■■■■□ 3.46
EFHD1-206ENST00000442845 RAD54L2Q9Y4B4 1467 aa36.67■■■■□ 3.46
EFHD1-206ENST00000442845 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
EFHD1-206ENST00000442845 FGD5Q6ZNL6 1462 aa36.64■■■■□ 3.46
EFHD1-206ENST00000442845 AQRO60306 1485 aaKnown RBP eCLIP36.63■■■■□ 3.45
EFHD1-206ENST00000442845 TDRD9Q8NDG6 1382 aaKnown RBP36.53■■■■□ 3.44
EFHD1-206ENST00000442845 FBLN2P98095 1184 aa36.39■■■■□ 3.42
EFHD1-206ENST00000442845 WDR97A6NE52 1622 aa36.37■■■■□ 3.41
EFHD1-206ENST00000442845 WRNQ14191 1432 aaPredicted RBP eCLIP36.35■■■■□ 3.41
EFHD1-206ENST00000442845 CHD1O14646 1710 aa36.32■■■■□ 3.4
EFHD1-206ENST00000442845 TOP2BQ02880 1626 aa36.28■■■■□ 3.4
EFHD1-206ENST00000442845 BIVM-ERCC5R4GMW8 1640 aa36.28■■■■□ 3.4
EFHD1-206ENST00000442845 SYNJ1O43426 1573 aa36.27■■■■□ 3.4
EFHD1-206ENST00000442845 TRIM41Q8WV44 630 aa36.25■■■■□ 3.39
EFHD1-206ENST00000442845 GRIN2BQ13224 1484 aa36.24■■■■□ 3.39
EFHD1-206ENST00000442845 SNAPC4Q5SXM2 1469 aa36.24■■■■□ 3.39
EFHD1-206ENST00000442845 ABCA10Q8WWZ4 1543 aa36.24■■■■□ 3.39
EFHD1-206ENST00000442845 GAPVD1Q14C86 1478 aa36.22■■■■□ 3.39
EFHD1-206ENST00000442845 CHMP7Q8WUX9 453 aaPredicted RBP36.19■■■■□ 3.38
EFHD1-206ENST00000442845 PBRM1Q86U86 1689 aa36.16■■■■□ 3.38
EFHD1-206ENST00000442845 MAGI1Q96QZ7 1491 aaPredicted RBP36.16■■■■□ 3.38
EFHD1-206ENST00000442845 ABCA5Q8WWZ7 1642 aa36.12■■■■□ 3.37
EFHD1-206ENST00000442845 RIMBP3CA6NJZ7 1639 aa36.05■■■■□ 3.36
EFHD1-206ENST00000442845 RIMBP3BA6NNM3 1639 aa36.05■■■■□ 3.36
EFHD1-206ENST00000442845 RIMBP3Q9UFD9 1639 aa36.05■■■■□ 3.36
EFHD1-206ENST00000442845 SYNJ2O15056 1496 aa36.03■■■■□ 3.36
EFHD1-206ENST00000442845 ARHGEF11O15085 1522 aa35.98■■■■□ 3.35
EFHD1-206ENST00000442845 CLASP1Q7Z460 1538 aa35.83■■■■□ 3.33
EFHD1-206ENST00000442845 CYB5RLQ6IPT4 315 aa35.82■■■■□ 3.32
EFHD1-206ENST00000442845 ERICH3Q5RHP9 1530 aa35.8■■■■□ 3.32
EFHD1-206ENST00000442845 ADAMTS12P58397 1594 aa35.8■■■■□ 3.32
EFHD1-206ENST00000442845 FHAD1B1AJZ9 1412 aa35.77■■■■□ 3.32
EFHD1-206ENST00000442845 GRIN2AQ12879 1464 aa35.76■■■■□ 3.32
EFHD1-206ENST00000442845 ARAP1Q96P48 1450 aa35.66■■■■□ 3.3
EFHD1-206ENST00000442845 KIF27Q86VH2 1401 aa35.65■■■■□ 3.3
EFHD1-206ENST00000442845 CEP170Q5SW79 1584 aa35.59■■■■□ 3.29
EFHD1-206ENST00000442845 NUP160Q12769 1436 aa35.58■■■■□ 3.29
EFHD1-206ENST00000442845 IGF1RP08069 1367 aa35.54■■■■□ 3.28
EFHD1-206ENST00000442845 CUL7Q14999 1698 aa35.43■■■■□ 3.26
EFHD1-206ENST00000442845 ERCC6L2Q5T890 1561 aa35.37■■■■□ 3.25
EFHD1-206ENST00000442845 JPH4Q96JJ6 628 aa35.36■■■■□ 3.25
EFHD1-206ENST00000442845 SHROOM2Q13796 1616 aa35.35■■■■□ 3.25
EFHD1-206ENST00000442845 CARMIL1Q5VZK9 1371 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms