RNA–Protein interactions for RNA: ENST00000442838.2

CDK5P1-201, Transcript of cyclin dependent kinase 5 pseudogene 1, humanhuman

BASIC

Gene CDK5P1, Length 877 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5P1-201ENST00000442838 NISCHQ9Y2I1 1504 aa27.36■■□□□ 1.97
CDK5P1-201ENST00000442838 CCDC180Q9P1Z9 1646 aa24.26■■□□□ 1.47
CDK5P1-201ENST00000442838 ABCC9O60706 1549 aa23.81■■□□□ 1.4
CDK5P1-201ENST00000442838 DCAF8L2P0C7V8 631 aa22.96■■□□□ 1.27
CDK5P1-201ENST00000442838 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
CDK5P1-201ENST00000442838 NACADO15069 1562 aa22.8■■□□□ 1.24
CDK5P1-201ENST00000442838 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
CDK5P1-201ENST00000442838 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
CDK5P1-201ENST00000442838 DCAF1Q9Y4B6 1507 aa22.56■■□□□ 1.2
CDK5P1-201ENST00000442838 UNC13AQ9UPW8 1703 aa22.39■■□□□ 1.17
CDK5P1-201ENST00000442838 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
CDK5P1-201ENST00000442838 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
CDK5P1-201ENST00000442838 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
CDK5P1-201ENST00000442838 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
CDK5P1-201ENST00000442838 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
CDK5P1-201ENST00000442838 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
CDK5P1-201ENST00000442838 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
CDK5P1-201ENST00000442838 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
CDK5P1-201ENST00000442838 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
CDK5P1-201ENST00000442838 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
CDK5P1-201ENST00000442838 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
CDK5P1-201ENST00000442838 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
CDK5P1-201ENST00000442838 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
CDK5P1-201ENST00000442838 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
CDK5P1-201ENST00000442838 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
CDK5P1-201ENST00000442838 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
CDK5P1-201ENST00000442838 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
CDK5P1-201ENST00000442838 WIZO95785 1651 aa20.92■□□□□ 0.94
CDK5P1-201ENST00000442838 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
CDK5P1-201ENST00000442838 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
CDK5P1-201ENST00000442838 NESP48681 1621 aa20.63■□□□□ 0.89
CDK5P1-201ENST00000442838 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
CDK5P1-201ENST00000442838 LAMC3Q9Y6N6 1575 aa20.49■□□□□ 0.87
CDK5P1-201ENST00000442838 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
CDK5P1-201ENST00000442838 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
CDK5P1-201ENST00000442838 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
CDK5P1-201ENST00000442838 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
CDK5P1-201ENST00000442838 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
CDK5P1-201ENST00000442838 CFTRP13569 1480 aa20.33■□□□□ 0.85
CDK5P1-201ENST00000442838 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
CDK5P1-201ENST00000442838 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
CDK5P1-201ENST00000442838 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
CDK5P1-201ENST00000442838 CUX2O14529 1486 aa20.19■□□□□ 0.82
CDK5P1-201ENST00000442838 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
CDK5P1-201ENST00000442838 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
CDK5P1-201ENST00000442838 WDR62O43379 1518 aa20.08■□□□□ 0.81
CDK5P1-201ENST00000442838 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
CDK5P1-201ENST00000442838 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
CDK5P1-201ENST00000442838 DNMBPQ6XZF7 1577 aa19.89■□□□□ 0.77
CDK5P1-201ENST00000442838 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
CDK5P1-201ENST00000442838 CUX1P39880 1505 aa19.81■□□□□ 0.76
CDK5P1-201ENST00000442838 POLA1P09884 1462 aaPredicted RBP19.76■□□□□ 0.75
CDK5P1-201ENST00000442838 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
CDK5P1-201ENST00000442838 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
CDK5P1-201ENST00000442838 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
CDK5P1-201ENST00000442838 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
CDK5P1-201ENST00000442838 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
CDK5P1-201ENST00000442838 SOGA1O94964 1423 aa19.68■□□□□ 0.74
CDK5P1-201ENST00000442838 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
CDK5P1-201ENST00000442838 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
CDK5P1-201ENST00000442838 AQRO60306 1485 aaKnown RBP eCLIP19.64■□□□□ 0.73
CDK5P1-201ENST00000442838 EIF4G3O43432 1585 aaKnown RBP19.63■□□□□ 0.73
CDK5P1-201ENST00000442838 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
CDK5P1-201ENST00000442838 BIVM-ERCC5R4GMW8 1640 aa19.61■□□□□ 0.73
CDK5P1-201ENST00000442838 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
CDK5P1-201ENST00000442838 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
CDK5P1-201ENST00000442838 WDR97A6NE52 1622 aa19.54■□□□□ 0.72
CDK5P1-201ENST00000442838 ABCA10Q8WWZ4 1543 aa19.5■□□□□ 0.71
CDK5P1-201ENST00000442838 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
CDK5P1-201ENST00000442838 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
CDK5P1-201ENST00000442838 SNAPC4Q5SXM2 1469 aa19.43■□□□□ 0.7
CDK5P1-201ENST00000442838 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
CDK5P1-201ENST00000442838 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
CDK5P1-201ENST00000442838 FBLN2P98095 1184 aa19.42■□□□□ 0.7
CDK5P1-201ENST00000442838 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
CDK5P1-201ENST00000442838 CHD1O14646 1710 aa19.4■□□□□ 0.7
CDK5P1-201ENST00000442838 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
CDK5P1-201ENST00000442838 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
CDK5P1-201ENST00000442838 SYNJ2O15056 1496 aa19.29■□□□□ 0.68
CDK5P1-201ENST00000442838 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
CDK5P1-201ENST00000442838 ADAMTS12P58397 1594 aa19.26■□□□□ 0.67
CDK5P1-201ENST00000442838 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
CDK5P1-201ENST00000442838 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
CDK5P1-201ENST00000442838 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
CDK5P1-201ENST00000442838 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
CDK5P1-201ENST00000442838 IGF1RP08069 1367 aa19.19■□□□□ 0.66
CDK5P1-201ENST00000442838 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
CDK5P1-201ENST00000442838 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
CDK5P1-201ENST00000442838 RIMBP3CA6NJZ7 1639 aa19.13■□□□□ 0.65
CDK5P1-201ENST00000442838 RIMBP3BA6NNM3 1639 aa19.13■□□□□ 0.65
CDK5P1-201ENST00000442838 RIMBP3Q9UFD9 1639 aa19.13■□□□□ 0.65
CDK5P1-201ENST00000442838 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
CDK5P1-201ENST00000442838 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
CDK5P1-201ENST00000442838 CUL7Q14999 1698 aa19.1■□□□□ 0.65
CDK5P1-201ENST00000442838 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
CDK5P1-201ENST00000442838 NUP160Q12769 1436 aa19.08■□□□□ 0.64
CDK5P1-201ENST00000442838 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
CDK5P1-201ENST00000442838 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
CDK5P1-201ENST00000442838 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
CDK5P1-201ENST00000442838 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms