RNA–Protein interactions for RNA: ENST00000442736.2

IGKV1D-35-201, Transcript of immunoglobulin kappa variable 1D-35 (pseudogene), humanhuman

BASIC

Gene IGKV1D-35, Length 271 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-35-201ENST00000442736 NISCHQ9Y2I1 1504 aa22.25■■□□□ 1.15
IGKV1D-35-201ENST00000442736 ABCC9O60706 1549 aa21.43■■□□□ 1.02
IGKV1D-35-201ENST00000442736 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
IGKV1D-35-201ENST00000442736 CCDC180Q9P1Z9 1646 aa20.48■□□□□ 0.87
IGKV1D-35-201ENST00000442736 RB1CC1Q8TDY2 1594 aa19.93■□□□□ 0.78
IGKV1D-35-201ENST00000442736 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
IGKV1D-35-201ENST00000442736 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
IGKV1D-35-201ENST00000442736 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
IGKV1D-35-201ENST00000442736 NACADO15069 1562 aa19.51■□□□□ 0.71
IGKV1D-35-201ENST00000442736 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
IGKV1D-35-201ENST00000442736 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
IGKV1D-35-201ENST00000442736 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.68
IGKV1D-35-201ENST00000442736 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
IGKV1D-35-201ENST00000442736 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.63
IGKV1D-35-201ENST00000442736 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
IGKV1D-35-201ENST00000442736 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
IGKV1D-35-201ENST00000442736 CUX2O14529 1486 aa18.82■□□□□ 0.6
IGKV1D-35-201ENST00000442736 TRIM41Q8WV44 630 aa18.68■□□□□ 0.58
IGKV1D-35-201ENST00000442736 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
IGKV1D-35-201ENST00000442736 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
IGKV1D-35-201ENST00000442736 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
IGKV1D-35-201ENST00000442736 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
IGKV1D-35-201ENST00000442736 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
IGKV1D-35-201ENST00000442736 NESP48681 1621 aa18.14■□□□□ 0.49
IGKV1D-35-201ENST00000442736 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
IGKV1D-35-201ENST00000442736 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
IGKV1D-35-201ENST00000442736 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
IGKV1D-35-201ENST00000442736 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
IGKV1D-35-201ENST00000442736 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
IGKV1D-35-201ENST00000442736 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
IGKV1D-35-201ENST00000442736 LAMC3Q9Y6N6 1575 aa17.81■□□□□ 0.44
IGKV1D-35-201ENST00000442736 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
IGKV1D-35-201ENST00000442736 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
IGKV1D-35-201ENST00000442736 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
IGKV1D-35-201ENST00000442736 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
IGKV1D-35-201ENST00000442736 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
IGKV1D-35-201ENST00000442736 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
IGKV1D-35-201ENST00000442736 WDR62O43379 1518 aa17.66■□□□□ 0.42
IGKV1D-35-201ENST00000442736 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
IGKV1D-35-201ENST00000442736 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
IGKV1D-35-201ENST00000442736 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
IGKV1D-35-201ENST00000442736 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
IGKV1D-35-201ENST00000442736 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
IGKV1D-35-201ENST00000442736 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
IGKV1D-35-201ENST00000442736 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
IGKV1D-35-201ENST00000442736 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
IGKV1D-35-201ENST00000442736 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
IGKV1D-35-201ENST00000442736 ARAP1Q96P48 1450 aa17.33■□□□□ 0.37
IGKV1D-35-201ENST00000442736 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
IGKV1D-35-201ENST00000442736 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
IGKV1D-35-201ENST00000442736 ILDR1Q86SU0 546 aaPredicted RBP17.21■□□□□ 0.35
IGKV1D-35-201ENST00000442736 CHD1O14646 1710 aa17.2■□□□□ 0.34
IGKV1D-35-201ENST00000442736 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
IGKV1D-35-201ENST00000442736 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
IGKV1D-35-201ENST00000442736 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
IGKV1D-35-201ENST00000442736 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
IGKV1D-35-201ENST00000442736 IFT140Q96RY7 1462 aa17.03■□□□□ 0.32
IGKV1D-35-201ENST00000442736 CFTRP13569 1480 aa16.99■□□□□ 0.31
IGKV1D-35-201ENST00000442736 WIZO95785 1651 aa16.98■□□□□ 0.31
IGKV1D-35-201ENST00000442736 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
IGKV1D-35-201ENST00000442736 FBLN2P98095 1184 aa16.91■□□□□ 0.3
IGKV1D-35-201ENST00000442736 CLASP1Q7Z460 1538 aa16.87■□□□□ 0.29
IGKV1D-35-201ENST00000442736 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.29
IGKV1D-35-201ENST00000442736 TOPBP1Q92547 1522 aa16.84■□□□□ 0.29
IGKV1D-35-201ENST00000442736 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
IGKV1D-35-201ENST00000442736 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
IGKV1D-35-201ENST00000442736 KIF13AQ9H1H9 1805 aa16.75■□□□□ 0.27
IGKV1D-35-201ENST00000442736 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
IGKV1D-35-201ENST00000442736 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
IGKV1D-35-201ENST00000442736 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
IGKV1D-35-201ENST00000442736 KDM4FA0A1W2PPD8 638 aa16.68■□□□□ 0.26
IGKV1D-35-201ENST00000442736 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
IGKV1D-35-201ENST00000442736 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
IGKV1D-35-201ENST00000442736 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
IGKV1D-35-201ENST00000442736 ERCC6L2Q5T890 1561 aa16.59■□□□□ 0.25
IGKV1D-35-201ENST00000442736 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
IGKV1D-35-201ENST00000442736 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
IGKV1D-35-201ENST00000442736 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
IGKV1D-35-201ENST00000442736 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
IGKV1D-35-201ENST00000442736 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
IGKV1D-35-201ENST00000442736 KDM6BO15054 1643 aa16.52■□□□□ 0.23
IGKV1D-35-201ENST00000442736 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
IGKV1D-35-201ENST00000442736 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
IGKV1D-35-201ENST00000442736 PBRM1Q86U86 1689 aa16.47■□□□□ 0.23
IGKV1D-35-201ENST00000442736 GRIN2BQ13224 1484 aa16.44■□□□□ 0.22
IGKV1D-35-201ENST00000442736 SOGA1O94964 1423 aa16.44■□□□□ 0.22
IGKV1D-35-201ENST00000442736 TSPOAP1O95153 1857 aa16.42■□□□□ 0.22
IGKV1D-35-201ENST00000442736 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
IGKV1D-35-201ENST00000442736 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
IGKV1D-35-201ENST00000442736 ADGRL1O94910 1474 aa16.41■□□□□ 0.22
IGKV1D-35-201ENST00000442736 DIP2BQ9P265 1576 aa16.4■□□□□ 0.22
IGKV1D-35-201ENST00000442736 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
IGKV1D-35-201ENST00000442736 ABCC10Q5T3U5 1492 aa16.37■□□□□ 0.21
IGKV1D-35-201ENST00000442736 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
IGKV1D-35-201ENST00000442736 LMTK3Q96Q04 1460 aa16.36■□□□□ 0.21
IGKV1D-35-201ENST00000442736 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
IGKV1D-35-201ENST00000442736 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
IGKV1D-35-201ENST00000442736 MAPKBP1O60336 1514 aa16.28■□□□□ 0.2
IGKV1D-35-201ENST00000442736 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
IGKV1D-35-201ENST00000442736 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms