RNA–Protein interactions for RNA: ENST00000442584.2

RFTN1P1-201, Transcript of raftlin, lipid raft linker 1 pseudogene 1, humanhuman

TSL 5 BASIC

Gene RFTN1P1, Length 1,033 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1P1-201ENST00000442584 NISCHQ9Y2I1 1504 aa22.01■■□□□ 1.11
RFTN1P1-201ENST00000442584 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
RFTN1P1-201ENST00000442584 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
RFTN1P1-201ENST00000442584 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
RFTN1P1-201ENST00000442584 ABCC9O60706 1549 aa18.46■□□□□ 0.55
RFTN1P1-201ENST00000442584 DCAF1Q9Y4B6 1507 aa18.3■□□□□ 0.52
RFTN1P1-201ENST00000442584 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
RFTN1P1-201ENST00000442584 NACADO15069 1562 aa18.14■□□□□ 0.49
RFTN1P1-201ENST00000442584 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
RFTN1P1-201ENST00000442584 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
RFTN1P1-201ENST00000442584 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
RFTN1P1-201ENST00000442584 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
RFTN1P1-201ENST00000442584 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
RFTN1P1-201ENST00000442584 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
RFTN1P1-201ENST00000442584 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
RFTN1P1-201ENST00000442584 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
RFTN1P1-201ENST00000442584 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
RFTN1P1-201ENST00000442584 CECR2Q9BXF3 1484 aa17.04■□□□□ 0.32
RFTN1P1-201ENST00000442584 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
RFTN1P1-201ENST00000442584 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
RFTN1P1-201ENST00000442584 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
RFTN1P1-201ENST00000442584 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
RFTN1P1-201ENST00000442584 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
RFTN1P1-201ENST00000442584 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
RFTN1P1-201ENST00000442584 WIZO95785 1651 aa16.78■□□□□ 0.28
RFTN1P1-201ENST00000442584 ATAD2BQ9ULI0 1458 aa16.77■□□□□ 0.28
RFTN1P1-201ENST00000442584 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
RFTN1P1-201ENST00000442584 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
RFTN1P1-201ENST00000442584 HMGXB3Q12766 1538 aa16.71■□□□□ 0.27
RFTN1P1-201ENST00000442584 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
RFTN1P1-201ENST00000442584 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
RFTN1P1-201ENST00000442584 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
RFTN1P1-201ENST00000442584 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
RFTN1P1-201ENST00000442584 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
RFTN1P1-201ENST00000442584 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
RFTN1P1-201ENST00000442584 CFTRP13569 1480 aa16.24■□□□□ 0.19
RFTN1P1-201ENST00000442584 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
RFTN1P1-201ENST00000442584 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
RFTN1P1-201ENST00000442584 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
RFTN1P1-201ENST00000442584 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
RFTN1P1-201ENST00000442584 NESP48681 1621 aa16.09■□□□□ 0.17
RFTN1P1-201ENST00000442584 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
RFTN1P1-201ENST00000442584 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
RFTN1P1-201ENST00000442584 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
RFTN1P1-201ENST00000442584 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
RFTN1P1-201ENST00000442584 ABCC8Q09428 1581 aa15.96■□□□□ 0.14
RFTN1P1-201ENST00000442584 WRNQ14191 1432 aaPredicted RBP eCLIP15.95■□□□□ 0.14
RFTN1P1-201ENST00000442584 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
RFTN1P1-201ENST00000442584 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
RFTN1P1-201ENST00000442584 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
RFTN1P1-201ENST00000442584 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
RFTN1P1-201ENST00000442584 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
RFTN1P1-201ENST00000442584 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
RFTN1P1-201ENST00000442584 CUX1P39880 1505 aa15.88■□□□□ 0.13
RFTN1P1-201ENST00000442584 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
RFTN1P1-201ENST00000442584 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
RFTN1P1-201ENST00000442584 WDR62O43379 1518 aa15.84■□□□□ 0.13
RFTN1P1-201ENST00000442584 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
RFTN1P1-201ENST00000442584 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
RFTN1P1-201ENST00000442584 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
RFTN1P1-201ENST00000442584 POLA1P09884 1462 aaPredicted RBP15.74■□□□□ 0.11
RFTN1P1-201ENST00000442584 WDR97A6NE52 1622 aa15.66■□□□□ 0.1
RFTN1P1-201ENST00000442584 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
RFTN1P1-201ENST00000442584 CUX2O14529 1486 aa15.65■□□□□ 0.1
RFTN1P1-201ENST00000442584 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
RFTN1P1-201ENST00000442584 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
RFTN1P1-201ENST00000442584 SOGA1O94964 1423 aa15.64■□□□□ 0.09
RFTN1P1-201ENST00000442584 EEA1Q15075 1411 aa15.64■□□□□ 0.09
RFTN1P1-201ENST00000442584 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
RFTN1P1-201ENST00000442584 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
RFTN1P1-201ENST00000442584 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
RFTN1P1-201ENST00000442584 RUSC2Q8N2Y8 1516 aa15.51■□□□□ 0.07
RFTN1P1-201ENST00000442584 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
RFTN1P1-201ENST00000442584 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
RFTN1P1-201ENST00000442584 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
RFTN1P1-201ENST00000442584 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
RFTN1P1-201ENST00000442584 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
RFTN1P1-201ENST00000442584 TDRD9Q8NDG6 1382 aaKnown RBP15.47■□□□□ 0.07
RFTN1P1-201ENST00000442584 GRIN2BQ13224 1484 aa15.46■□□□□ 0.06
RFTN1P1-201ENST00000442584 CUL7Q14999 1698 aa15.45■□□□□ 0.06
RFTN1P1-201ENST00000442584 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
RFTN1P1-201ENST00000442584 AQRO60306 1485 aaKnown RBP eCLIP15.44■□□□□ 0.06
RFTN1P1-201ENST00000442584 KIF21BO75037 1637 aa15.43■□□□□ 0.06
RFTN1P1-201ENST00000442584 IGF1RP08069 1367 aa15.42■□□□□ 0.06
RFTN1P1-201ENST00000442584 PRXQ9BXM0 1461 aa15.41■□□□□ 0.06
RFTN1P1-201ENST00000442584 FAM9AQ8IZU1 332 aaPredicted RBP15.41■□□□□ 0.06
RFTN1P1-201ENST00000442584 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
RFTN1P1-201ENST00000442584 ADAMTS12P58397 1594 aa15.38■□□□□ 0.05
RFTN1P1-201ENST00000442584 FOXD1Q16676 465 aa15.38■□□□□ 0.05
RFTN1P1-201ENST00000442584 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
RFTN1P1-201ENST00000442584 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
RFTN1P1-201ENST00000442584 SNAPC4Q5SXM2 1469 aa15.35■□□□□ 0.05
RFTN1P1-201ENST00000442584 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
RFTN1P1-201ENST00000442584 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
RFTN1P1-201ENST00000442584 SYNJ2O15056 1496 aa15.3■□□□□ 0.04
RFTN1P1-201ENST00000442584 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
RFTN1P1-201ENST00000442584 DNAJC5Q9H3Z4 198 aa15.24■□□□□ 0.03
RFTN1P1-201ENST00000442584 TNIKQ9UKE5 1360 aa15.23■□□□□ 0.03
RFTN1P1-201ENST00000442584 CTTNBP2Q8WZ74 1663 aa15.22■□□□□ 0.03
RFTN1P1-201ENST00000442584 POTEDQ86YR6 584 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms