RNA–Protein interactions for RNA: ENST00000442489.1

CDKN1B-203, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 5

Gene CDKN1B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-203ENST00000442489 NISCHQ9Y2I1 1504 aa40.75■■■■■ 4.11
CDKN1B-203ENST00000442489 CCDC180Q9P1Z9 1646 aa36.44■■■■□ 3.42
CDKN1B-203ENST00000442489 ABCC9O60706 1549 aa36.29■■■■□ 3.4
CDKN1B-203ENST00000442489 RB1CC1Q8TDY2 1594 aa34.62■■■■□ 3.13
CDKN1B-203ENST00000442489 NACADO15069 1562 aa34.39■■■■□ 3.1
CDKN1B-203ENST00000442489 DCAF8L2P0C7V8 631 aa34.33■■■■□ 3.09
CDKN1B-203ENST00000442489 MYO15BQ96JP2 1530 aa34.05■■■■□ 3.04
CDKN1B-203ENST00000442489 ZCCHC6Q5VYS8 1495 aaKnown RBP33.94■■■■□ 3.02
CDKN1B-203ENST00000442489 UNC13AQ9UPW8 1703 aa33.86■■■■□ 3.01
CDKN1B-203ENST00000442489 DCAF1Q9Y4B6 1507 aa33.83■■■■□ 3.01
CDKN1B-203ENST00000442489 DNAJC5BQ9UF47 199 aa33.82■■■■□ 3
CDKN1B-203ENST00000442489 PABPN1Q86U42 306 aaKnown RBP eCLIP33.8■■■■□ 3
CDKN1B-203ENST00000442489 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
CDKN1B-203ENST00000442489 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
CDKN1B-203ENST00000442489 SHROOM4Q9ULL8 1493 aa33.11■■■□□ 2.89
CDKN1B-203ENST00000442489 CC2D2AQ9P2K1 1620 aa32.79■■■□□ 2.84
CDKN1B-203ENST00000442489 EIF4G1Q04637 1599 aaKnown RBP32.75■■■□□ 2.83
CDKN1B-203ENST00000442489 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
CDKN1B-203ENST00000442489 NCAPD3P42695 1498 aa31.7■■■□□ 2.66
CDKN1B-203ENST00000442489 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
CDKN1B-203ENST00000442489 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
CDKN1B-203ENST00000442489 BAZ1AQ9NRL2 1556 aaPredicted RBP31.62■■■□□ 2.65
CDKN1B-203ENST00000442489 SMARCA2P51531 1590 aa31.61■■■□□ 2.65
CDKN1B-203ENST00000442489 HMGXB3Q12766 1538 aa31.51■■■□□ 2.63
CDKN1B-203ENST00000442489 PEG3Q9GZU2 1588 aa31.44■■■□□ 2.62
CDKN1B-203ENST00000442489 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
CDKN1B-203ENST00000442489 ERCC6Q03468 1493 aa31.36■■■□□ 2.61
CDKN1B-203ENST00000442489 MROH2BQ7Z745 1585 aa31.35■■■□□ 2.61
CDKN1B-203ENST00000442489 NESP48681 1621 aa31.2■■■□□ 2.59
CDKN1B-203ENST00000442489 CUX2O14529 1486 aa31.19■■■□□ 2.58
CDKN1B-203ENST00000442489 LAMC3Q9Y6N6 1575 aa31.02■■■□□ 2.56
CDKN1B-203ENST00000442489 WIZO95785 1651 aa31■■■□□ 2.55
CDKN1B-203ENST00000442489 DNAJC5Q9H3Z4 198 aa30.97■■■□□ 2.55
CDKN1B-203ENST00000442489 RSF1Q96T23 1441 aaPredicted RBP30.95■■■□□ 2.54
CDKN1B-203ENST00000442489 THOC2Q8NI27 1593 aaKnown RBP30.86■■■□□ 2.53
CDKN1B-203ENST00000442489 KIF21AQ7Z4S6 1674 aa30.86■■■□□ 2.53
CDKN1B-203ENST00000442489 PDS5BQ9NTI5 1447 aa30.83■■■□□ 2.53
CDKN1B-203ENST00000442489 CADPSQ9ULU8 1353 aa30.77■■■□□ 2.52
CDKN1B-203ENST00000442489 TOP2AP11388 1531 aaKnown RBP30.73■■■□□ 2.51
CDKN1B-203ENST00000442489 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
CDKN1B-203ENST00000442489 CEP164Q9UPV0 1460 aa30.49■■■□□ 2.47
CDKN1B-203ENST00000442489 WDR62O43379 1518 aa30.46■■■□□ 2.47
CDKN1B-203ENST00000442489 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.47
CDKN1B-203ENST00000442489 CFTRP13569 1480 aa30.44■■■□□ 2.46
CDKN1B-203ENST00000442489 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
CDKN1B-203ENST00000442489 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
CDKN1B-203ENST00000442489 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
CDKN1B-203ENST00000442489 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
CDKN1B-203ENST00000442489 SUPT5HO00267 1087 aaKnown RBP29.85■■■□□ 2.37
CDKN1B-203ENST00000442489 IFT140Q96RY7 1462 aa29.85■■■□□ 2.37
CDKN1B-203ENST00000442489 ABCC8Q09428 1581 aa29.84■■■□□ 2.37
CDKN1B-203ENST00000442489 OSCARQ8IYS5 282 aa29.81■■■□□ 2.36
CDKN1B-203ENST00000442489 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
CDKN1B-203ENST00000442489 ZNF608Q9ULD9 1512 aaPredicted RBP29.78■■■□□ 2.36
CDKN1B-203ENST00000442489 TRIM41Q8WV44 630 aa29.78■■■□□ 2.36
CDKN1B-203ENST00000442489 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
CDKN1B-203ENST00000442489 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
CDKN1B-203ENST00000442489 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
CDKN1B-203ENST00000442489 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.326e-9■■■■■ 35.5
CDKN1B-203ENST00000442489 RAD54L2Q9Y4B4 1467 aa29.48■■■□□ 2.31
CDKN1B-203ENST00000442489 SOGA1O94964 1423 aa29.46■■■□□ 2.31
CDKN1B-203ENST00000442489 CHD1O14646 1710 aa29.45■■■□□ 2.3
CDKN1B-203ENST00000442489 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
CDKN1B-203ENST00000442489 CUX1P39880 1505 aa29.43■■■□□ 2.3
CDKN1B-203ENST00000442489 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
CDKN1B-203ENST00000442489 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
CDKN1B-203ENST00000442489 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
CDKN1B-203ENST00000442489 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.29
CDKN1B-203ENST00000442489 FBLN2P98095 1184 aa29.38■■■□□ 2.29
CDKN1B-203ENST00000442489 ARHGEF11O15085 1522 aa29.32■■■□□ 2.28
CDKN1B-203ENST00000442489 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
CDKN1B-203ENST00000442489 SNAPC4Q5SXM2 1469 aa29.25■■■□□ 2.27
CDKN1B-203ENST00000442489 BIVM-ERCC5R4GMW8 1640 aa29.21■■■□□ 2.27
CDKN1B-203ENST00000442489 TOP2BQ02880 1626 aa29.2■■■□□ 2.26
CDKN1B-203ENST00000442489 GRIN2BQ13224 1484 aa29.19■■■□□ 2.26
CDKN1B-203ENST00000442489 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
CDKN1B-203ENST00000442489 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
CDKN1B-203ENST00000442489 CHMP7Q8WUX9 453 aaPredicted RBP29.16■■■□□ 2.26
CDKN1B-203ENST00000442489 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
CDKN1B-203ENST00000442489 CYB5RLQ6IPT4 315 aa29.12■■■□□ 2.25
CDKN1B-203ENST00000442489 SYNJ1O43426 1573 aa29.12■■■□□ 2.25
CDKN1B-203ENST00000442489 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
CDKN1B-203ENST00000442489 ABCA10Q8WWZ4 1543 aa29.11■■■□□ 2.25
CDKN1B-203ENST00000442489 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
CDKN1B-203ENST00000442489 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
CDKN1B-203ENST00000442489 CLASP1Q7Z460 1538 aa29.04■■■□□ 2.24
CDKN1B-203ENST00000442489 ARAP1Q96P48 1450 aa29.03■■■□□ 2.24
CDKN1B-203ENST00000442489 ADAMTS12P58397 1594 aa28.83■■■□□ 2.21
CDKN1B-203ENST00000442489 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
CDKN1B-203ENST00000442489 TRHP20396 242 aaPredicted RBP28.8■■■□□ 2.2
CDKN1B-203ENST00000442489 ERICH3Q5RHP9 1530 aa28.78■■■□□ 2.2
CDKN1B-203ENST00000442489 FHAD1B1AJZ9 1412 aa28.74■■■□□ 2.19
CDKN1B-203ENST00000442489 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
CDKN1B-203ENST00000442489 NUP160Q12769 1436 aa28.68■■■□□ 2.18
CDKN1B-203ENST00000442489 ERCC6L2Q5T890 1561 aa28.61■■■□□ 2.17
CDKN1B-203ENST00000442489 KIF27Q86VH2 1401 aa28.59■■■□□ 2.17
CDKN1B-203ENST00000442489 SHROOM2Q13796 1616 aa28.56■■■□□ 2.16
CDKN1B-203ENST00000442489 CUL7Q14999 1698 aa28.5■■■□□ 2.15
CDKN1B-203ENST00000442489 IGF1RP08069 1367 aa28.48■■■□□ 2.15
CDKN1B-203ENST00000442489 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms