RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
GACAT3-202ENST00000442387 ABCC9O60706 1549 aa25.07■■□□□ 1.6
GACAT3-202ENST00000442387 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
GACAT3-202ENST00000442387 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
GACAT3-202ENST00000442387 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
GACAT3-202ENST00000442387 NACADO15069 1562 aa23.6■■□□□ 1.37
GACAT3-202ENST00000442387 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
GACAT3-202ENST00000442387 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
GACAT3-202ENST00000442387 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
GACAT3-202ENST00000442387 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
GACAT3-202ENST00000442387 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
GACAT3-202ENST00000442387 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
GACAT3-202ENST00000442387 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
GACAT3-202ENST00000442387 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
GACAT3-202ENST00000442387 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
GACAT3-202ENST00000442387 CC2D2AQ9P2K1 1620 aa22.62■■□□□ 1.21
GACAT3-202ENST00000442387 CECR2Q9BXF3 1484 aa22.61■■□□□ 1.21
GACAT3-202ENST00000442387 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
GACAT3-202ENST00000442387 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
GACAT3-202ENST00000442387 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
GACAT3-202ENST00000442387 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
GACAT3-202ENST00000442387 CUX2O14529 1486 aa21.68■■□□□ 1.06
GACAT3-202ENST00000442387 ERCC6Q03468 1493 aa21.68■■□□□ 1.06
GACAT3-202ENST00000442387 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
GACAT3-202ENST00000442387 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
GACAT3-202ENST00000442387 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
GACAT3-202ENST00000442387 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
GACAT3-202ENST00000442387 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
GACAT3-202ENST00000442387 NESP48681 1621 aa21.48■■□□□ 1.03
GACAT3-202ENST00000442387 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
GACAT3-202ENST00000442387 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
GACAT3-202ENST00000442387 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
GACAT3-202ENST00000442387 THOC2Q8NI27 1593 aaKnown RBP21.29■■□□□ 1
GACAT3-202ENST00000442387 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
GACAT3-202ENST00000442387 KIF21AQ7Z4S6 1674 aa21.16■□□□□ 0.98
GACAT3-202ENST00000442387 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.98
GACAT3-202ENST00000442387 WIZO95785 1651 aa21.05■□□□□ 0.96
GACAT3-202ENST00000442387 MRC2Q9UBG0 1479 aa21.04■□□□□ 0.96
GACAT3-202ENST00000442387 WDR62O43379 1518 aa20.99■□□□□ 0.95
GACAT3-202ENST00000442387 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
GACAT3-202ENST00000442387 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
GACAT3-202ENST00000442387 CFTRP13569 1480 aa20.86■□□□□ 0.93
GACAT3-202ENST00000442387 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
GACAT3-202ENST00000442387 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
GACAT3-202ENST00000442387 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
GACAT3-202ENST00000442387 URB2Q14146 1524 aaKnown RBP20.72■□□□□ 0.91
GACAT3-202ENST00000442387 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
GACAT3-202ENST00000442387 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
GACAT3-202ENST00000442387 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
GACAT3-202ENST00000442387 IFT140Q96RY7 1462 aa20.52■□□□□ 0.88
GACAT3-202ENST00000442387 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
GACAT3-202ENST00000442387 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
GACAT3-202ENST00000442387 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
GACAT3-202ENST00000442387 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
GACAT3-202ENST00000442387 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
GACAT3-202ENST00000442387 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
GACAT3-202ENST00000442387 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
GACAT3-202ENST00000442387 EIF4G3O43432 1585 aaKnown RBP20.36■□□□□ 0.85
GACAT3-202ENST00000442387 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
GACAT3-202ENST00000442387 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.84
GACAT3-202ENST00000442387 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
GACAT3-202ENST00000442387 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
GACAT3-202ENST00000442387 FBLN2P98095 1184 aa20.21■□□□□ 0.83
GACAT3-202ENST00000442387 CYB5RLQ6IPT4 315 aa20.2■□□□□ 0.82
GACAT3-202ENST00000442387 CHD1O14646 1710 aa20.19■□□□□ 0.82
GACAT3-202ENST00000442387 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
GACAT3-202ENST00000442387 SOGA1O94964 1423 aa20.18■□□□□ 0.82
GACAT3-202ENST00000442387 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
GACAT3-202ENST00000442387 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
GACAT3-202ENST00000442387 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
GACAT3-202ENST00000442387 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
GACAT3-202ENST00000442387 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
GACAT3-202ENST00000442387 CUX1P39880 1505 aa20.06■□□□□ 0.8
GACAT3-202ENST00000442387 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
GACAT3-202ENST00000442387 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
GACAT3-202ENST00000442387 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
GACAT3-202ENST00000442387 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
GACAT3-202ENST00000442387 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
GACAT3-202ENST00000442387 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
GACAT3-202ENST00000442387 SYNJ2O15056 1496 aa19.97■□□□□ 0.79
GACAT3-202ENST00000442387 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
GACAT3-202ENST00000442387 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
GACAT3-202ENST00000442387 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
GACAT3-202ENST00000442387 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
GACAT3-202ENST00000442387 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
GACAT3-202ENST00000442387 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
GACAT3-202ENST00000442387 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
GACAT3-202ENST00000442387 ADAMTS12P58397 1594 aa19.71■□□□□ 0.75
GACAT3-202ENST00000442387 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
GACAT3-202ENST00000442387 NUP160Q12769 1436 aa19.69■□□□□ 0.74
GACAT3-202ENST00000442387 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
GACAT3-202ENST00000442387 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
GACAT3-202ENST00000442387 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
GACAT3-202ENST00000442387 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
GACAT3-202ENST00000442387 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
GACAT3-202ENST00000442387 SHROOM2Q13796 1616 aa19.58■□□□□ 0.73
GACAT3-202ENST00000442387 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
GACAT3-202ENST00000442387 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
GACAT3-202ENST00000442387 JPH4Q96JJ6 628 aa19.5■□□□□ 0.71
GACAT3-202ENST00000442387 RUSC2Q8N2Y8 1516 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms