RNA–Protein interactions for RNA: ENST00000441850.1

RPP38-205, Transcript of ribonuclease P/MRP subunit p38, humanhuman

TSL 2

Gene RPP38, Length 863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-205ENST00000441850 NISCHQ9Y2I1 1504 aa40.94■■■■■ 4.14
RPP38-205ENST00000441850 ABCC9O60706 1549 aa37.3■■■■□ 3.56
RPP38-205ENST00000441850 CCDC180Q9P1Z9 1646 aa36.86■■■■□ 3.49
RPP38-205ENST00000441850 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
RPP38-205ENST00000441850 DNAJC5BQ9UF47 199 aa35.24■■■■□ 3.23
RPP38-205ENST00000441850 NACADO15069 1562 aa34.91■■■■□ 3.18
RPP38-205ENST00000441850 DCAF8L2P0C7V8 631 aa34.72■■■■□ 3.15
RPP38-205ENST00000441850 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
RPP38-205ENST00000441850 UNC13AQ9UPW8 1703 aa34.5■■■■□ 3.11
RPP38-205ENST00000441850 BICRAQ9NZM4 1560 aa34.3■■■■□ 3.08
RPP38-205ENST00000441850 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.08
RPP38-205ENST00000441850 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
RPP38-205ENST00000441850 DCAF1Q9Y4B6 1507 aa33.74■■■□□ 2.99
RPP38-205ENST00000441850 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
RPP38-205ENST00000441850 SHROOM4Q9ULL8 1493 aa33.69■■■□□ 2.98
RPP38-205ENST00000441850 CC2D2AQ9P2K1 1620 aa33.64■■■□□ 2.98
RPP38-205ENST00000441850 CECR2Q9BXF3 1484 aa33.59■■■□□ 2.97
RPP38-205ENST00000441850 EIF4G1Q04637 1599 aaKnown RBP33.48■■■□□ 2.95
RPP38-205ENST00000441850 DNAJC5Q9H3Z4 198 aa32.51■■■□□ 2.79
RPP38-205ENST00000441850 NCAPD3P42695 1498 aa32.23■■■□□ 2.75
RPP38-205ENST00000441850 ERCC6Q03468 1493 aa32.2■■■□□ 2.75
RPP38-205ENST00000441850 CUX2O14529 1486 aa32.18■■■□□ 2.74
RPP38-205ENST00000441850 ATAD2BQ9ULI0 1458 aa32.14■■■□□ 2.74
RPP38-205ENST00000441850 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
RPP38-205ENST00000441850 SMARCA2P51531 1590 aa32■■■□□ 2.71
RPP38-205ENST00000441850 HMGXB3Q12766 1538 aa32■■■□□ 2.71
RPP38-205ENST00000441850 NESP48681 1621 aa31.96■■■□□ 2.71
RPP38-205ENST00000441850 BAZ1BQ9UIG0 1483 aaKnown RBP31.83■■■□□ 2.69
RPP38-205ENST00000441850 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
RPP38-205ENST00000441850 THOC2Q8NI27 1593 aaKnown RBP31.68■■■□□ 2.66
RPP38-205ENST00000441850 PEG3Q9GZU2 1588 aa31.68■■■□□ 2.66
RPP38-205ENST00000441850 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
RPP38-205ENST00000441850 LAMC3Q9Y6N6 1575 aa31.58■■■□□ 2.65
RPP38-205ENST00000441850 KIF21AQ7Z4S6 1674 aa31.51■■■□□ 2.63
RPP38-205ENST00000441850 PDS5BQ9NTI5 1447 aa31.39■■■□□ 2.62
RPP38-205ENST00000441850 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
RPP38-205ENST00000441850 WIZO95785 1651 aa31.21■■■□□ 2.59
RPP38-205ENST00000441850 MRC2Q9UBG0 1479 aa31.2■■■□□ 2.58
RPP38-205ENST00000441850 WDR62O43379 1518 aa31.14■■■□□ 2.57
RPP38-205ENST00000441850 TRIM41Q8WV44 630 aa31.07■■■□□ 2.56
RPP38-205ENST00000441850 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.56
RPP38-205ENST00000441850 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.54
RPP38-205ENST00000441850 CFTRP13569 1480 aa30.83■■■□□ 2.53
RPP38-205ENST00000441850 RSF1Q96T23 1441 aaPredicted RBP30.79■■■□□ 2.52
RPP38-205ENST00000441850 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
RPP38-205ENST00000441850 URB2Q14146 1524 aaKnown RBP30.74■■■□□ 2.51
RPP38-205ENST00000441850 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
RPP38-205ENST00000441850 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
RPP38-205ENST00000441850 ZNF608Q9ULD9 1512 aaPredicted RBP30.44■■■□□ 2.46
RPP38-205ENST00000441850 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
RPP38-205ENST00000441850 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
RPP38-205ENST00000441850 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
RPP38-205ENST00000441850 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
RPP38-205ENST00000441850 IFT140Q96RY7 1462 aa30.37■■■□□ 2.45
RPP38-205ENST00000441850 TOPBP1Q92547 1522 aa30.33■■■□□ 2.45
RPP38-205ENST00000441850 EIF4G3O43432 1585 aaKnown RBP30.26■■■□□ 2.43
RPP38-205ENST00000441850 ARHGEF11O15085 1522 aa30.24■■■□□ 2.43
RPP38-205ENST00000441850 DNMBPQ6XZF7 1577 aa30.18■■■□□ 2.42
RPP38-205ENST00000441850 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
RPP38-205ENST00000441850 AQRO60306 1485 aaKnown RBP eCLIP30.09■■■□□ 2.41
RPP38-205ENST00000441850 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
RPP38-205ENST00000441850 CHD1O14646 1710 aa30.07■■■□□ 2.4
RPP38-205ENST00000441850 POLA1P09884 1462 aaPredicted RBP30.01■■■□□ 2.4
RPP38-205ENST00000441850 CYB5RLQ6IPT4 315 aa29.99■■■□□ 2.39
RPP38-205ENST00000441850 ARAP1Q96P48 1450 aa29.94■■■□□ 2.38
RPP38-205ENST00000441850 FBLN2P98095 1184 aa29.94■■■□□ 2.38
RPP38-205ENST00000441850 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
RPP38-205ENST00000441850 TDRD9Q8NDG6 1382 aaKnown RBP29.85■■■□□ 2.37
RPP38-205ENST00000441850 SOGA1O94964 1423 aa29.81■■■□□ 2.36
RPP38-205ENST00000441850 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
RPP38-205ENST00000441850 FGD5Q6ZNL6 1462 aa29.79■■■□□ 2.36
RPP38-205ENST00000441850 TRHP20396 242 aaPredicted RBP29.77■■■□□ 2.36
RPP38-205ENST00000441850 CUX1P39880 1505 aa29.71■■■□□ 2.35
RPP38-205ENST00000441850 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
RPP38-205ENST00000441850 WDR97A6NE52 1622 aa29.67■■■□□ 2.34
RPP38-205ENST00000441850 MAGI1Q96QZ7 1491 aaPredicted RBP29.63■■■□□ 2.33
RPP38-205ENST00000441850 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
RPP38-205ENST00000441850 CHMP7Q8WUX9 453 aaPredicted RBP29.61■■■□□ 2.33
RPP38-205ENST00000441850 GRIN2BQ13224 1484 aa29.6■■■□□ 2.33
RPP38-205ENST00000441850 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
RPP38-205ENST00000441850 PBRM1Q86U86 1689 aa29.51■■■□□ 2.31
RPP38-205ENST00000441850 SUPT5HO00267 1087 aaKnown RBP29.47■■■□□ 2.31
RPP38-205ENST00000441850 GAPVD1Q14C86 1478 aa29.47■■■□□ 2.31
RPP38-205ENST00000441850 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
RPP38-205ENST00000441850 ABCA10Q8WWZ4 1543 aa29.38■■■□□ 2.29
RPP38-205ENST00000441850 ERCC6L2Q5T890 1561 aa29.29■■■□□ 2.28
RPP38-205ENST00000441850 GRIN2AQ12879 1464 aa29.25■■■□□ 2.27
RPP38-205ENST00000441850 ADAMTS12P58397 1594 aa29.24■■■□□ 2.27
RPP38-205ENST00000441850 CEP170Q5SW79 1584 aa29.21■■■□□ 2.27
RPP38-205ENST00000441850 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.26
RPP38-205ENST00000441850 NUP160Q12769 1436 aa29.15■■■□□ 2.26
RPP38-205ENST00000441850 AEBP2Q6ZN18 517 aaPredicted RBP29.11■■■□□ 2.25
RPP38-205ENST00000441850 BIVM-ERCC5R4GMW8 1640 aa29.11■■■□□ 2.25
RPP38-205ENST00000441850 TOP2BQ02880 1626 aa29.1■■■□□ 2.25
RPP38-205ENST00000441850 FHAD1B1AJZ9 1412 aa29.06■■■□□ 2.24
RPP38-205ENST00000441850 SHROOM2Q13796 1616 aa29.05■■■□□ 2.24
RPP38-205ENST00000441850 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
RPP38-205ENST00000441850 PRG4Q92954 1404 aaPredicted RBP28.9■■■□□ 2.22
RPP38-205ENST00000441850 KIF13AQ9H1H9 1805 aa28.85■■■□□ 2.21
RPP38-205ENST00000441850 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms