RNA–Protein interactions for RNA: ENST00000441844.2

RCL1-205, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 2

Gene RCL1, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-205ENST00000441844 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
RCL1-205ENST00000441844 CCDC180Q9P1Z9 1646 aa25.36■■□□□ 1.65
RCL1-205ENST00000441844 ABCC9O60706 1549 aa25.08■■□□□ 1.61
RCL1-205ENST00000441844 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
RCL1-205ENST00000441844 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
RCL1-205ENST00000441844 NACADO15069 1562 aa23.95■■□□□ 1.43
RCL1-205ENST00000441844 MYO15BQ96JP2 1530 aa23.76■■□□□ 1.39
RCL1-205ENST00000441844 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
RCL1-205ENST00000441844 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
RCL1-205ENST00000441844 PABPN1Q86U42 306 aaKnown RBP eCLIP23.46■■□□□ 1.35
RCL1-205ENST00000441844 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.33
RCL1-205ENST00000441844 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
RCL1-205ENST00000441844 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
RCL1-205ENST00000441844 SCRIBQ14160 1630 aa23.17■■□□□ 1.3
RCL1-205ENST00000441844 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
RCL1-205ENST00000441844 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
RCL1-205ENST00000441844 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
RCL1-205ENST00000441844 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
RCL1-205ENST00000441844 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
RCL1-205ENST00000441844 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
RCL1-205ENST00000441844 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
RCL1-205ENST00000441844 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
RCL1-205ENST00000441844 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
RCL1-205ENST00000441844 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
RCL1-205ENST00000441844 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
RCL1-205ENST00000441844 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
RCL1-205ENST00000441844 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
RCL1-205ENST00000441844 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
RCL1-205ENST00000441844 WIZO95785 1651 aa21.69■■□□□ 1.06
RCL1-205ENST00000441844 ERCC6Q03468 1493 aa21.65■■□□□ 1.06
RCL1-205ENST00000441844 NESP48681 1621 aa21.63■■□□□ 1.05
RCL1-205ENST00000441844 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
RCL1-205ENST00000441844 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
RCL1-205ENST00000441844 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
RCL1-205ENST00000441844 CUX2O14529 1486 aa21.47■■□□□ 1.03
RCL1-205ENST00000441844 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
RCL1-205ENST00000441844 CFTRP13569 1480 aa21.31■■□□□ 1
RCL1-205ENST00000441844 THOC2Q8NI27 1593 aaKnown RBP21.29■■□□□ 1
RCL1-205ENST00000441844 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
RCL1-205ENST00000441844 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
RCL1-205ENST00000441844 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
RCL1-205ENST00000441844 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
RCL1-205ENST00000441844 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
RCL1-205ENST00000441844 WDR62O43379 1518 aa21.13■□□□□ 0.97
RCL1-205ENST00000441844 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
RCL1-205ENST00000441844 DNAJC5Q9H3Z4 198 aa21.07■□□□□ 0.96
RCL1-205ENST00000441844 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
RCL1-205ENST00000441844 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
RCL1-205ENST00000441844 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
RCL1-205ENST00000441844 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
RCL1-205ENST00000441844 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
RCL1-205ENST00000441844 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
RCL1-205ENST00000441844 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
RCL1-205ENST00000441844 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
RCL1-205ENST00000441844 SOGA1O94964 1423 aa20.62■□□□□ 0.89
RCL1-205ENST00000441844 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
RCL1-205ENST00000441844 CUX1P39880 1505 aa20.62■□□□□ 0.89
RCL1-205ENST00000441844 FGD5Q6ZNL6 1462 aa20.6■□□□□ 0.89
RCL1-205ENST00000441844 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
RCL1-205ENST00000441844 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
RCL1-205ENST00000441844 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.897e-7■■■■■ 29.6
RCL1-205ENST00000441844 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
RCL1-205ENST00000441844 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
RCL1-205ENST00000441844 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
RCL1-205ENST00000441844 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
RCL1-205ENST00000441844 FBLN2P98095 1184 aa20.43■□□□□ 0.86
RCL1-205ENST00000441844 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
RCL1-205ENST00000441844 GRIN2BQ13224 1484 aa20.39■□□□□ 0.85
RCL1-205ENST00000441844 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
RCL1-205ENST00000441844 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
RCL1-205ENST00000441844 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
RCL1-205ENST00000441844 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
RCL1-205ENST00000441844 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
RCL1-205ENST00000441844 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
RCL1-205ENST00000441844 MAGI1Q96QZ7 1491 aaPredicted RBP20.34■□□□□ 0.85
RCL1-205ENST00000441844 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
RCL1-205ENST00000441844 CHD1O14646 1710 aa20.28■□□□□ 0.84
RCL1-205ENST00000441844 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
RCL1-205ENST00000441844 SYNJ2O15056 1496 aa20.26■□□□□ 0.83
RCL1-205ENST00000441844 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
RCL1-205ENST00000441844 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
RCL1-205ENST00000441844 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
RCL1-205ENST00000441844 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
RCL1-205ENST00000441844 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
RCL1-205ENST00000441844 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
RCL1-205ENST00000441844 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
RCL1-205ENST00000441844 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
RCL1-205ENST00000441844 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
RCL1-205ENST00000441844 ADAMTS12P58397 1594 aa20.1■□□□□ 0.81
RCL1-205ENST00000441844 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
RCL1-205ENST00000441844 KIF27Q86VH2 1401 aa20.07■□□□□ 0.8
RCL1-205ENST00000441844 NUP160Q12769 1436 aa20.03■□□□□ 0.8
RCL1-205ENST00000441844 ARAP1Q96P48 1450 aa20.03■□□□□ 0.8
RCL1-205ENST00000441844 IGF1RP08069 1367 aa20.02■□□□□ 0.8
RCL1-205ENST00000441844 CEP170Q5SW79 1584 aa19.98■□□□□ 0.79
RCL1-205ENST00000441844 CARMIL1Q5VZK9 1371 aa19.9■□□□□ 0.78
RCL1-205ENST00000441844 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
RCL1-205ENST00000441844 CUL7Q14999 1698 aa19.87■□□□□ 0.77
RCL1-205ENST00000441844 PRG4Q92954 1404 aaPredicted RBP19.84■□□□□ 0.77
RCL1-205ENST00000441844 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms