RNA–Protein interactions for RNA: ENST00000441649.1

FAM78B-204, Transcript of family with sequence similarity 78 member B, humanhuman

TSL 5

Gene FAM78B, Length 2,264 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-204ENST00000441649 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
FAM78B-204ENST00000441649 CCDC180Q9P1Z9 1646 aa27.62■■■□□ 2.01
FAM78B-204ENST00000441649 ABCC9O60706 1549 aa27.42■■□□□ 1.98
FAM78B-204ENST00000441649 RB1CC1Q8TDY2 1594 aa26.18■■□□□ 1.78
FAM78B-204ENST00000441649 NACADO15069 1562 aa26.05■■□□□ 1.76
FAM78B-204ENST00000441649 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
FAM78B-204ENST00000441649 DCAF8L2P0C7V8 631 aa25.73■■□□□ 1.71
FAM78B-204ENST00000441649 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
FAM78B-204ENST00000441649 DNAJC5BQ9UF47 199 aa25.7■■□□□ 1.7
FAM78B-204ENST00000441649 ZCCHC6Q5VYS8 1495 aaKnown RBP25.54■■□□□ 1.68
FAM78B-204ENST00000441649 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
FAM78B-204ENST00000441649 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
FAM78B-204ENST00000441649 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
FAM78B-204ENST00000441649 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
FAM78B-204ENST00000441649 SCRIBQ14160 1630 aa25.1■■□□□ 1.61
FAM78B-204ENST00000441649 CC2D2AQ9P2K1 1620 aa24.84■■□□□ 1.57
FAM78B-204ENST00000441649 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
FAM78B-204ENST00000441649 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
FAM78B-204ENST00000441649 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
FAM78B-204ENST00000441649 SMARCA4P51532 1647 aa24■■□□□ 1.43
FAM78B-204ENST00000441649 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
FAM78B-204ENST00000441649 SMARCA2P51531 1590 aa23.9■■□□□ 1.42
FAM78B-204ENST00000441649 HMGXB3Q12766 1538 aa23.89■■□□□ 1.42
FAM78B-204ENST00000441649 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.41
FAM78B-204ENST00000441649 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
FAM78B-204ENST00000441649 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
FAM78B-204ENST00000441649 MROH2BQ7Z745 1585 aa23.72■■□□□ 1.39
FAM78B-204ENST00000441649 BAZ1BQ9UIG0 1483 aaKnown RBP23.7■■□□□ 1.39
FAM78B-204ENST00000441649 CUX2O14529 1486 aa23.63■■□□□ 1.37
FAM78B-204ENST00000441649 NESP48681 1621 aa23.63■■□□□ 1.37
FAM78B-204ENST00000441649 ERCC6Q03468 1493 aa23.61■■□□□ 1.37
FAM78B-204ENST00000441649 DNAJC5Q9H3Z4 198 aa23.49■■□□□ 1.35
FAM78B-204ENST00000441649 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
FAM78B-204ENST00000441649 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
FAM78B-204ENST00000441649 WIZO95785 1651 aa23.45■■□□□ 1.34
FAM78B-204ENST00000441649 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
FAM78B-204ENST00000441649 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
FAM78B-204ENST00000441649 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
FAM78B-204ENST00000441649 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
FAM78B-204ENST00000441649 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
FAM78B-204ENST00000441649 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
FAM78B-204ENST00000441649 WDR62O43379 1518 aa23.1■■□□□ 1.29
FAM78B-204ENST00000441649 CFTRP13569 1480 aa23.07■■□□□ 1.28
FAM78B-204ENST00000441649 CEP164Q9UPV0 1460 aa23.02■■□□□ 1.28
FAM78B-204ENST00000441649 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
FAM78B-204ENST00000441649 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
FAM78B-204ENST00000441649 PRDM2Q13029 1718 aa22.92■■□□□ 1.26
FAM78B-204ENST00000441649 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
FAM78B-204ENST00000441649 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
FAM78B-204ENST00000441649 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
FAM78B-204ENST00000441649 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
FAM78B-204ENST00000441649 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
FAM78B-204ENST00000441649 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
FAM78B-204ENST00000441649 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
FAM78B-204ENST00000441649 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
FAM78B-204ENST00000441649 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
FAM78B-204ENST00000441649 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
FAM78B-204ENST00000441649 EIF4G3O43432 1585 aaKnown RBP22.44■■□□□ 1.18
FAM78B-204ENST00000441649 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.18
FAM78B-204ENST00000441649 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.16
FAM78B-204ENST00000441649 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
FAM78B-204ENST00000441649 RIMBP3CA6NJZ7 1639 aa22.29■■□□□ 1.16
FAM78B-204ENST00000441649 RIMBP3BA6NNM3 1639 aa22.29■■□□□ 1.16
FAM78B-204ENST00000441649 RIMBP3Q9UFD9 1639 aa22.29■■□□□ 1.16
FAM78B-204ENST00000441649 CUX1P39880 1505 aa22.28■■□□□ 1.16
FAM78B-204ENST00000441649 CHD1O14646 1710 aa22.28■■□□□ 1.16
FAM78B-204ENST00000441649 FGD5Q6ZNL6 1462 aa22.25■■□□□ 1.15
FAM78B-204ENST00000441649 SOGA1O94964 1423 aa22.24■■□□□ 1.15
FAM78B-204ENST00000441649 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
FAM78B-204ENST00000441649 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
FAM78B-204ENST00000441649 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
FAM78B-204ENST00000441649 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
FAM78B-204ENST00000441649 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
FAM78B-204ENST00000441649 LOC105371045A0A1W2PR82 267 aa22.06■■□□□ 1.12
FAM78B-204ENST00000441649 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
FAM78B-204ENST00000441649 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
FAM78B-204ENST00000441649 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
FAM78B-204ENST00000441649 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
FAM78B-204ENST00000441649 CLASP1Q7Z460 1538 aa22.04■■□□□ 1.12
FAM78B-204ENST00000441649 FBLN2P98095 1184 aa22.04■■□□□ 1.12
FAM78B-204ENST00000441649 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
FAM78B-204ENST00000441649 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
FAM78B-204ENST00000441649 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
FAM78B-204ENST00000441649 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
FAM78B-204ENST00000441649 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
FAM78B-204ENST00000441649 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
FAM78B-204ENST00000441649 SYNJ1O43426 1573 aa21.97■■□□□ 1.11
FAM78B-204ENST00000441649 TOP2BQ02880 1626 aa21.95■■□□□ 1.1
FAM78B-204ENST00000441649 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
FAM78B-204ENST00000441649 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
FAM78B-204ENST00000441649 EEA1Q15075 1411 aa21.88■■□□□ 1.09
FAM78B-204ENST00000441649 ADAMTS12P58397 1594 aa21.83■■□□□ 1.08
FAM78B-204ENST00000441649 GRIN2AQ12879 1464 aa21.79■■□□□ 1.08
FAM78B-204ENST00000441649 CSRNP3Q8WYN3 585 aa21.76■■□□□ 1.07
FAM78B-204ENST00000441649 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
FAM78B-204ENST00000441649 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
FAM78B-204ENST00000441649 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
FAM78B-204ENST00000441649 NUP160Q12769 1436 aa21.74■■□□□ 1.07
FAM78B-204ENST00000441649 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
FAM78B-204ENST00000441649 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms