RNA–Protein interactions for RNA: ENST00000441638.1

AP002856.4-201, humanhuman

TSL 4 BASIC

Gene AP002856.4, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.4-201ENST00000441638 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
AP002856.4-201ENST00000441638 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
AP002856.4-201ENST00000441638 ABCC9O60706 1549 aa16.98■□□□□ 0.31
AP002856.4-201ENST00000441638 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
AP002856.4-201ENST00000441638 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
AP002856.4-201ENST00000441638 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
AP002856.4-201ENST00000441638 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
AP002856.4-201ENST00000441638 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
AP002856.4-201ENST00000441638 NACADO15069 1562 aa16.25■□□□□ 0.19
AP002856.4-201ENST00000441638 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
AP002856.4-201ENST00000441638 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
AP002856.4-201ENST00000441638 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
AP002856.4-201ENST00000441638 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
AP002856.4-201ENST00000441638 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
AP002856.4-201ENST00000441638 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
AP002856.4-201ENST00000441638 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
AP002856.4-201ENST00000441638 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
AP002856.4-201ENST00000441638 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
AP002856.4-201ENST00000441638 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
AP002856.4-201ENST00000441638 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
AP002856.4-201ENST00000441638 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
AP002856.4-201ENST00000441638 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
AP002856.4-201ENST00000441638 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
AP002856.4-201ENST00000441638 SMARCA2P51531 1590 aa15.02■□□□□ -0
AP002856.4-201ENST00000441638 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
AP002856.4-201ENST00000441638 WIZO95785 1651 aa14.97□□□□□ -0.01
AP002856.4-201ENST00000441638 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
AP002856.4-201ENST00000441638 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
AP002856.4-201ENST00000441638 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
AP002856.4-201ENST00000441638 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
AP002856.4-201ENST00000441638 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
AP002856.4-201ENST00000441638 SUPT5HO00267 1087 aaKnown RBP14.75□□□□□ -0.05
AP002856.4-201ENST00000441638 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
AP002856.4-201ENST00000441638 NESP48681 1621 aa14.69□□□□□ -0.06
AP002856.4-201ENST00000441638 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
AP002856.4-201ENST00000441638 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
AP002856.4-201ENST00000441638 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
AP002856.4-201ENST00000441638 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
AP002856.4-201ENST00000441638 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
AP002856.4-201ENST00000441638 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
AP002856.4-201ENST00000441638 PHF23Q9BUL5 403 aaPredicted RBP14.49□□□□□ -0.09
AP002856.4-201ENST00000441638 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
AP002856.4-201ENST00000441638 CFTRP13569 1480 aa14.47□□□□□ -0.09
AP002856.4-201ENST00000441638 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
AP002856.4-201ENST00000441638 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
AP002856.4-201ENST00000441638 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
AP002856.4-201ENST00000441638 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
AP002856.4-201ENST00000441638 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
AP002856.4-201ENST00000441638 CUX2O14529 1486 aa14.35□□□□□ -0.11
AP002856.4-201ENST00000441638 WDR62O43379 1518 aa14.29□□□□□ -0.12
AP002856.4-201ENST00000441638 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
AP002856.4-201ENST00000441638 TOPBP1Q92547 1522 aa14.21□□□□□ -0.13
AP002856.4-201ENST00000441638 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.14
AP002856.4-201ENST00000441638 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
AP002856.4-201ENST00000441638 CUX1P39880 1505 aa14.14□□□□□ -0.15
AP002856.4-201ENST00000441638 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
AP002856.4-201ENST00000441638 IFT140Q96RY7 1462 aa14.09□□□□□ -0.15
AP002856.4-201ENST00000441638 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
AP002856.4-201ENST00000441638 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
AP002856.4-201ENST00000441638 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
AP002856.4-201ENST00000441638 SOGA1O94964 1423 aa14.06□□□□□ -0.16
AP002856.4-201ENST00000441638 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
AP002856.4-201ENST00000441638 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
AP002856.4-201ENST00000441638 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
AP002856.4-201ENST00000441638 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
AP002856.4-201ENST00000441638 TOP2BQ02880 1626 aa14.02□□□□□ -0.16
AP002856.4-201ENST00000441638 EIF4G3O43432 1585 aaKnown RBP14.02□□□□□ -0.16
AP002856.4-201ENST00000441638 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
AP002856.4-201ENST00000441638 TDRD9Q8NDG6 1382 aaKnown RBP13.99□□□□□ -0.17
AP002856.4-201ENST00000441638 WDR97A6NE52 1622 aa13.96□□□□□ -0.17
AP002856.4-201ENST00000441638 FBLN2P98095 1184 aa13.93□□□□□ -0.18
AP002856.4-201ENST00000441638 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
AP002856.4-201ENST00000441638 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.18
AP002856.4-201ENST00000441638 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
AP002856.4-201ENST00000441638 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
AP002856.4-201ENST00000441638 CHD1O14646 1710 aa13.87□□□□□ -0.19
AP002856.4-201ENST00000441638 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
AP002856.4-201ENST00000441638 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
AP002856.4-201ENST00000441638 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
AP002856.4-201ENST00000441638 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
AP002856.4-201ENST00000441638 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
AP002856.4-201ENST00000441638 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
AP002856.4-201ENST00000441638 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
AP002856.4-201ENST00000441638 KIF27Q86VH2 1401 aa13.77□□□□□ -0.21
AP002856.4-201ENST00000441638 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
AP002856.4-201ENST00000441638 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
AP002856.4-201ENST00000441638 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
AP002856.4-201ENST00000441638 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.22
AP002856.4-201ENST00000441638 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
AP002856.4-201ENST00000441638 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
AP002856.4-201ENST00000441638 CUL7Q14999 1698 aa13.69□□□□□ -0.22
AP002856.4-201ENST00000441638 FAM9AQ8IZU1 332 aaPredicted RBP13.67□□□□□ -0.22
AP002856.4-201ENST00000441638 IGF1RP08069 1367 aa13.66□□□□□ -0.22
AP002856.4-201ENST00000441638 CEP170Q5SW79 1584 aa13.64□□□□□ -0.23
AP002856.4-201ENST00000441638 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
AP002856.4-201ENST00000441638 RIMBP3CA6NJZ7 1639 aa13.62□□□□□ -0.23
AP002856.4-201ENST00000441638 RIMBP3BA6NNM3 1639 aa13.62□□□□□ -0.23
AP002856.4-201ENST00000441638 RIMBP3Q9UFD9 1639 aa13.62□□□□□ -0.23
AP002856.4-201ENST00000441638 CLASP1Q7Z460 1538 aa13.62□□□□□ -0.23
AP002856.4-201ENST00000441638 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms