RNA–Protein interactions for RNA: ENST00000441628.5

AMPH-203, Transcript of amphiphysin, humanhuman

TSL 1 (best)

Gene AMPH, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-203ENST00000441628 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
AMPH-203ENST00000441628 CCDC180Q9P1Z9 1646 aa27.55■■■□□ 2
AMPH-203ENST00000441628 ZCCHC6Q5VYS8 1495 aaKnown RBP26.46■■□□□ 1.83
AMPH-203ENST00000441628 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
AMPH-203ENST00000441628 ABCC9O60706 1549 aa26.03■■□□□ 1.76
AMPH-203ENST00000441628 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
AMPH-203ENST00000441628 MYO15BQ96JP2 1530 aa25.74■■□□□ 1.71
AMPH-203ENST00000441628 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
AMPH-203ENST00000441628 NACADO15069 1562 aa25.61■■□□□ 1.69
AMPH-203ENST00000441628 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
AMPH-203ENST00000441628 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
AMPH-203ENST00000441628 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
AMPH-203ENST00000441628 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
AMPH-203ENST00000441628 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
AMPH-203ENST00000441628 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
AMPH-203ENST00000441628 CECR2Q9BXF3 1484 aa24.49■■□□□ 1.51
AMPH-203ENST00000441628 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
AMPH-203ENST00000441628 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
AMPH-203ENST00000441628 BAZ1AQ9NRL2 1556 aaPredicted RBP24.32■■□□□ 1.48
AMPH-203ENST00000441628 SMARCA4P51532 1647 aa24.26■■□□□ 1.47
AMPH-203ENST00000441628 WIZO95785 1651 aa24.18■■□□□ 1.46
AMPH-203ENST00000441628 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
AMPH-203ENST00000441628 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
AMPH-203ENST00000441628 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
AMPH-203ENST00000441628 ATAD2BQ9ULI0 1458 aa23.82■■□□□ 1.4
AMPH-203ENST00000441628 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
AMPH-203ENST00000441628 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
AMPH-203ENST00000441628 CCDC88BA6NC98 1476 aa23.63■■□□□ 1.37
AMPH-203ENST00000441628 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
AMPH-203ENST00000441628 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
AMPH-203ENST00000441628 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
AMPH-203ENST00000441628 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
AMPH-203ENST00000441628 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
AMPH-203ENST00000441628 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
AMPH-203ENST00000441628 PRDM2Q13029 1718 aa23.09■■□□□ 1.29
AMPH-203ENST00000441628 CFTRP13569 1480 aa23.09■■□□□ 1.29
AMPH-203ENST00000441628 CADPSQ9ULU8 1353 aa22.99■■□□□ 1.27
AMPH-203ENST00000441628 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
AMPH-203ENST00000441628 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.26
AMPH-203ENST00000441628 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
AMPH-203ENST00000441628 NESP48681 1621 aa22.87■■□□□ 1.25
AMPH-203ENST00000441628 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
AMPH-203ENST00000441628 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
AMPH-203ENST00000441628 TOP2BQ02880 1626 aa22.83■■□□□ 1.24
AMPH-203ENST00000441628 CUX1P39880 1505 aa22.77■■□□□ 1.24
AMPH-203ENST00000441628 FANCD2Q9BXW9 1451 aa22.76■■□□□ 1.23
AMPH-203ENST00000441628 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
AMPH-203ENST00000441628 SOGA1O94964 1423 aa22.66■■□□□ 1.22
AMPH-203ENST00000441628 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
AMPH-203ENST00000441628 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
AMPH-203ENST00000441628 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
AMPH-203ENST00000441628 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
AMPH-203ENST00000441628 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
AMPH-203ENST00000441628 DNMBPQ6XZF7 1577 aa22.58■■□□□ 1.21
AMPH-203ENST00000441628 EEA1Q15075 1411 aa22.58■■□□□ 1.2
AMPH-203ENST00000441628 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
AMPH-203ENST00000441628 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.19
AMPH-203ENST00000441628 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
AMPH-203ENST00000441628 CSRNP3Q8WYN3 585 aa22.43■■□□□ 1.18
AMPH-203ENST00000441628 POLA1P09884 1462 aaPredicted RBP22.41■■□□□ 1.18
AMPH-203ENST00000441628 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
AMPH-203ENST00000441628 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
AMPH-203ENST00000441628 KIF21BO75037 1637 aa22.36■■□□□ 1.17
AMPH-203ENST00000441628 KIF27Q86VH2 1401 aa22.36■■□□□ 1.17
AMPH-203ENST00000441628 CUX2O14529 1486 aa22.34■■□□□ 1.17
AMPH-203ENST00000441628 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.17
AMPH-203ENST00000441628 WDR97A6NE52 1622 aa22.33■■□□□ 1.16
AMPH-203ENST00000441628 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
AMPH-203ENST00000441628 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
AMPH-203ENST00000441628 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
AMPH-203ENST00000441628 WDR62O43379 1518 aa22.28■■□□□ 1.16
AMPH-203ENST00000441628 THOC2Q8NI27 1593 aaKnown RBP22.27■■□□□ 1.16
AMPH-203ENST00000441628 TARBP1Q13395 1621 aaKnown RBP22.24■■□□□ 1.15
AMPH-203ENST00000441628 PRXQ9BXM0 1461 aa22.23■■□□□ 1.15
AMPH-203ENST00000441628 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
AMPH-203ENST00000441628 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
AMPH-203ENST00000441628 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
AMPH-203ENST00000441628 ABCA5Q8WWZ7 1642 aa22.18■■□□□ 1.14
AMPH-203ENST00000441628 IGF1RP08069 1367 aa22.17■■□□□ 1.14
AMPH-203ENST00000441628 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
AMPH-203ENST00000441628 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
AMPH-203ENST00000441628 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
AMPH-203ENST00000441628 GAPVD1Q14C86 1478 aa22.07■■□□□ 1.12
AMPH-203ENST00000441628 IFT140Q96RY7 1462 aa22.07■■□□□ 1.12
AMPH-203ENST00000441628 CUL7Q14999 1698 aa22.07■■□□□ 1.12
AMPH-203ENST00000441628 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
AMPH-203ENST00000441628 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
AMPH-203ENST00000441628 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
AMPH-203ENST00000441628 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.11
AMPH-203ENST00000441628 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.1
AMPH-203ENST00000441628 CLIP1P30622 1438 aa21.92■■□□□ 1.1
AMPH-203ENST00000441628 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
AMPH-203ENST00000441628 ADAMTS12P58397 1594 aa21.89■■□□□ 1.1
AMPH-203ENST00000441628 CTTNBP2Q8WZ74 1663 aa21.87■■□□□ 1.09
AMPH-203ENST00000441628 FHAD1B1AJZ9 1412 aa21.82■■□□□ 1.08
AMPH-203ENST00000441628 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
AMPH-203ENST00000441628 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
AMPH-203ENST00000441628 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
AMPH-203ENST00000441628 ARHGAP35Q9NRY4 1499 aa21.75■■□□□ 1.07
AMPH-203ENST00000441628 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms