RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
TMEM39B-203ENST00000441402 CCDC180Q9P1Z9 1646 aa33.73■■■□□ 2.99
TMEM39B-203ENST00000441402 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
TMEM39B-203ENST00000441402 DCAF1Q9Y4B6 1507 aa32.06■■■□□ 2.72
TMEM39B-203ENST00000441402 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
TMEM39B-203ENST00000441402 ABCC9O60706 1549 aa31.78■■■□□ 2.68
TMEM39B-203ENST00000441402 MYO15BQ96JP2 1530 aa31.71■■■□□ 2.67
TMEM39B-203ENST00000441402 NACADO15069 1562 aa31.44■■■□□ 2.62
TMEM39B-203ENST00000441402 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
TMEM39B-203ENST00000441402 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
TMEM39B-203ENST00000441402 SCRIBQ14160 1630 aa30.88■■■□□ 2.53
TMEM39B-203ENST00000441402 UNC13AQ9UPW8 1703 aa30.45■■■□□ 2.47
TMEM39B-203ENST00000441402 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.42
TMEM39B-203ENST00000441402 BICRAQ9NZM4 1560 aa30.19■■■□□ 2.42
TMEM39B-203ENST00000441402 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
TMEM39B-203ENST00000441402 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
TMEM39B-203ENST00000441402 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.39
TMEM39B-203ENST00000441402 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
TMEM39B-203ENST00000441402 MROH2BQ7Z745 1585 aa29.82■■■□□ 2.36
TMEM39B-203ENST00000441402 SMARCA4P51532 1647 aa29.69■■■□□ 2.34
TMEM39B-203ENST00000441402 WIZO95785 1651 aa29.55■■■□□ 2.32
TMEM39B-203ENST00000441402 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
TMEM39B-203ENST00000441402 TOP2AP11388 1531 aaKnown RBP29.29■■■□□ 2.28
TMEM39B-203ENST00000441402 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.27
TMEM39B-203ENST00000441402 SMARCA2P51531 1590 aa29.23■■■□□ 2.27
TMEM39B-203ENST00000441402 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
TMEM39B-203ENST00000441402 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
TMEM39B-203ENST00000441402 BAZ1BQ9UIG0 1483 aaKnown RBP29.02■■■□□ 2.24
TMEM39B-203ENST00000441402 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
TMEM39B-203ENST00000441402 CCDC88BA6NC98 1476 aa28.99■■■□□ 2.23
TMEM39B-203ENST00000441402 HMGXB3Q12766 1538 aa28.96■■■□□ 2.23
TMEM39B-203ENST00000441402 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
TMEM39B-203ENST00000441402 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
TMEM39B-203ENST00000441402 CFTRP13569 1480 aa28.36■■■□□ 2.13
TMEM39B-203ENST00000441402 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
TMEM39B-203ENST00000441402 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.11
TMEM39B-203ENST00000441402 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
TMEM39B-203ENST00000441402 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
TMEM39B-203ENST00000441402 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.08
TMEM39B-203ENST00000441402 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
TMEM39B-203ENST00000441402 LAMC3Q9Y6N6 1575 aa28.01■■■□□ 2.08
TMEM39B-203ENST00000441402 TOP2BQ02880 1626 aa27.98■■■□□ 2.07
TMEM39B-203ENST00000441402 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
TMEM39B-203ENST00000441402 NESP48681 1621 aa27.91■■■□□ 2.06
TMEM39B-203ENST00000441402 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
TMEM39B-203ENST00000441402 CUX1P39880 1505 aa27.88■■■□□ 2.05
TMEM39B-203ENST00000441402 EEA1Q15075 1411 aa27.86■■■□□ 2.05
TMEM39B-203ENST00000441402 FAM9AQ8IZU1 332 aaPredicted RBP27.83■■■□□ 2.05
TMEM39B-203ENST00000441402 LOC105371045A0A1W2PR82 267 aa27.82■■■□□ 2.04
TMEM39B-203ENST00000441402 SOGA1O94964 1423 aa27.8■■■□□ 2.04
TMEM39B-203ENST00000441402 PDS5BQ9NTI5 1447 aa27.8■■■□□ 2.04
TMEM39B-203ENST00000441402 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
TMEM39B-203ENST00000441402 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
TMEM39B-203ENST00000441402 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
TMEM39B-203ENST00000441402 DNMBPQ6XZF7 1577 aa27.66■■■□□ 2.02
TMEM39B-203ENST00000441402 TOPBP1Q92547 1522 aa27.6■■■□□ 2.01
TMEM39B-203ENST00000441402 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2
TMEM39B-203ENST00000441402 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
TMEM39B-203ENST00000441402 URB2Q14146 1524 aaKnown RBP27.54■■■□□ 2
TMEM39B-203ENST00000441402 KIF27Q86VH2 1401 aa27.51■■□□□ 1.99
TMEM39B-203ENST00000441402 POLA1P09884 1462 aaPredicted RBP27.46■■□□□ 1.99
TMEM39B-203ENST00000441402 KIF21BO75037 1637 aa27.44■■□□□ 1.98
TMEM39B-203ENST00000441402 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
TMEM39B-203ENST00000441402 GOLGA3Q08378 1498 aa27.4■■□□□ 1.98
TMEM39B-203ENST00000441402 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.97
TMEM39B-203ENST00000441402 CUX2O14529 1486 aa27.38■■□□□ 1.97
TMEM39B-203ENST00000441402 TNIKQ9UKE5 1360 aa27.36■■□□□ 1.97
TMEM39B-203ENST00000441402 EHMT2Q96KQ7 1210 aa27.34■■□□□ 1.97
TMEM39B-203ENST00000441402 PRXQ9BXM0 1461 aa27.33■■□□□ 1.97
TMEM39B-203ENST00000441402 RAD54L2Q9Y4B4 1467 aa27.33■■□□□ 1.97
TMEM39B-203ENST00000441402 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
TMEM39B-203ENST00000441402 IGF1RP08069 1367 aa27.28■■□□□ 1.96
TMEM39B-203ENST00000441402 WDR62O43379 1518 aa27.28■■□□□ 1.96
TMEM39B-203ENST00000441402 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
TMEM39B-203ENST00000441402 ERCC6Q03468 1493 aa27.26■■□□□ 1.95
TMEM39B-203ENST00000441402 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
TMEM39B-203ENST00000441402 RAPGEF2Q9Y4G8 1499 aa27.24■■□□□ 1.95
TMEM39B-203ENST00000441402 TARBP1Q13395 1621 aaKnown RBP27.2■■□□□ 1.95
TMEM39B-203ENST00000441402 THOC2Q8NI27 1593 aaKnown RBP27.16■■□□□ 1.94
TMEM39B-203ENST00000441402 CEP162Q5TB80 1403 aa27.13■■□□□ 1.93
TMEM39B-203ENST00000441402 CARMIL1Q5VZK9 1371 aa27.13■■□□□ 1.93
TMEM39B-203ENST00000441402 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
TMEM39B-203ENST00000441402 IFT140Q96RY7 1462 aa27.09■■□□□ 1.93
TMEM39B-203ENST00000441402 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.93
TMEM39B-203ENST00000441402 GAPVD1Q14C86 1478 aa27.08■■□□□ 1.93
TMEM39B-203ENST00000441402 CUL7Q14999 1698 aa27.05■■□□□ 1.92
TMEM39B-203ENST00000441402 CLIP1P30622 1438 aa26.95■■□□□ 1.9
TMEM39B-203ENST00000441402 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.93e-6■■■□□ 18.4
TMEM39B-203ENST00000441402 GRIN2BQ13224 1484 aa26.88■■□□□ 1.89
TMEM39B-203ENST00000441402 PBRM1Q86U86 1689 aa26.88■■□□□ 1.89
TMEM39B-203ENST00000441402 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
TMEM39B-203ENST00000441402 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
TMEM39B-203ENST00000441402 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
TMEM39B-203ENST00000441402 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
TMEM39B-203ENST00000441402 VPS8Q8N3P4 1428 aa26.73■■□□□ 1.87
TMEM39B-203ENST00000441402 CTTNBP2Q8WZ74 1663 aa26.7■■□□□ 1.87
TMEM39B-203ENST00000441402 ARHGAP35Q9NRY4 1499 aa26.69■■□□□ 1.86
TMEM39B-203ENST00000441402 ARAP1Q96P48 1450 aa26.67■■□□□ 1.86
TMEM39B-203ENST00000441402 MAGI1Q96QZ7 1491 aaPredicted RBP26.67■■□□□ 1.86
TMEM39B-203ENST00000441402 RANGAP1P46060 587 aaPredicted RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms