RNA–Protein interactions for RNA: ENST00000441194.5

MMS19-211, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 5

Gene MMS19, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-211ENST00000441194 NISCHQ9Y2I1 1504 aa44.55■■■■■ 4.72
MMS19-211ENST00000441194 CCDC180Q9P1Z9 1646 aa39.61■■■■□ 3.93
MMS19-211ENST00000441194 ABCC9O60706 1549 aa38.47■■■■□ 3.75
MMS19-211ENST00000441194 ZCCHC6Q5VYS8 1495 aaKnown RBP37.17■■■■□ 3.54
MMS19-211ENST00000441194 NACADO15069 1562 aa37.13■■■■□ 3.53
MMS19-211ENST00000441194 RB1CC1Q8TDY2 1594 aa37.12■■■■□ 3.53
MMS19-211ENST00000441194 MYO15BQ96JP2 1530 aa37■■■■□ 3.51
MMS19-211ENST00000441194 DCAF1Q9Y4B6 1507 aa36.9■■■■□ 3.5
MMS19-211ENST00000441194 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
MMS19-211ENST00000441194 UNC13AQ9UPW8 1703 aa36.43■■■■□ 3.42
MMS19-211ENST00000441194 BICRAQ9NZM4 1560 aa36.08■■■■□ 3.37
MMS19-211ENST00000441194 SCRIBQ14160 1630 aa36.07■■■■□ 3.36
MMS19-211ENST00000441194 PABPN1Q86U42 306 aaKnown RBP eCLIP35.91■■■■□ 3.34
MMS19-211ENST00000441194 SHROOM4Q9ULL8 1493 aa35.67■■■■□ 3.3
MMS19-211ENST00000441194 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
MMS19-211ENST00000441194 EIF4G1Q04637 1599 aaKnown RBP35.05■■■■□ 3.2
MMS19-211ENST00000441194 CC2D2AQ9P2K1 1620 aa34.87■■■■□ 3.17
MMS19-211ENST00000441194 CECR2Q9BXF3 1484 aa34.67■■■■□ 3.14
MMS19-211ENST00000441194 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
MMS19-211ENST00000441194 BAZ1AQ9NRL2 1556 aaPredicted RBP34.49■■■■□ 3.11
MMS19-211ENST00000441194 MROH2BQ7Z745 1585 aa34.34■■■■□ 3.09
MMS19-211ENST00000441194 ATAD2BQ9ULI0 1458 aa34.29■■■■□ 3.08
MMS19-211ENST00000441194 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
MMS19-211ENST00000441194 PEG3Q9GZU2 1588 aa34.25■■■■□ 3.07
MMS19-211ENST00000441194 NCAPD3P42695 1498 aa34.25■■■■□ 3.07
MMS19-211ENST00000441194 HMGXB3Q12766 1538 aa34.14■■■■□ 3.06
MMS19-211ENST00000441194 WIZO95785 1651 aa33.99■■■■□ 3.03
MMS19-211ENST00000441194 BAZ1BQ9UIG0 1483 aaKnown RBP33.98■■■■□ 3.03
MMS19-211ENST00000441194 RSF1Q96T23 1441 aaPredicted RBP33.97■■■■□ 3.03
MMS19-211ENST00000441194 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
MMS19-211ENST00000441194 NESP48681 1621 aa33.38■■■□□ 2.93
MMS19-211ENST00000441194 LAMC3Q9Y6N6 1575 aa33.34■■■□□ 2.93
MMS19-211ENST00000441194 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
MMS19-211ENST00000441194 CCDC88BA6NC98 1476 aa33.18■■■□□ 2.9
MMS19-211ENST00000441194 CFTRP13569 1480 aa33.1■■■□□ 2.89
MMS19-211ENST00000441194 ERCC6Q03468 1493 aa33.1■■■□□ 2.89
MMS19-211ENST00000441194 SUPT5HO00267 1087 aaKnown RBP33.06■■■□□ 2.88
MMS19-211ENST00000441194 KIF21AQ7Z4S6 1674 aa33.06■■■□□ 2.88
MMS19-211ENST00000441194 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
MMS19-211ENST00000441194 PRDM2Q13029 1718 aa32.98■■■□□ 2.87
MMS19-211ENST00000441194 THOC2Q8NI27 1593 aaKnown RBP32.92■■■□□ 2.86
MMS19-211ENST00000441194 FANCD2Q9BXW9 1451 aa32.85■■■□□ 2.85
MMS19-211ENST00000441194 CEP164Q9UPV0 1460 aa32.8■■■□□ 2.84
MMS19-211ENST00000441194 CUX2O14529 1486 aa32.78■■■□□ 2.84
MMS19-211ENST00000441194 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
MMS19-211ENST00000441194 WDR62O43379 1518 aa32.67■■■□□ 2.82
MMS19-211ENST00000441194 URB2Q14146 1524 aaKnown RBP32.56■■■□□ 2.8
MMS19-211ENST00000441194 TOPBP1Q92547 1522 aa32.37■■■□□ 2.77
MMS19-211ENST00000441194 DNMBPQ6XZF7 1577 aa32.36■■■□□ 2.77
MMS19-211ENST00000441194 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
MMS19-211ENST00000441194 CUX1P39880 1505 aa32.21■■■□□ 2.75
MMS19-211ENST00000441194 POLA1P09884 1462 aaPredicted RBP32.11■■■□□ 2.73
MMS19-211ENST00000441194 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
MMS19-211ENST00000441194 TARBP1Q13395 1621 aaKnown RBP32.06■■■□□ 2.72
MMS19-211ENST00000441194 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
MMS19-211ENST00000441194 BIVM-ERCC5R4GMW8 1640 aa32.01■■■□□ 2.72
MMS19-211ENST00000441194 WRNQ14191 1432 aaPredicted RBP eCLIP31.99■■■□□ 2.71
MMS19-211ENST00000441194 TOP2BQ02880 1626 aa31.98■■■□□ 2.71
MMS19-211ENST00000441194 SYNJ1O43426 1573 aa31.98■■■□□ 2.71
MMS19-211ENST00000441194 ZNF608Q9ULD9 1512 aaPredicted RBP31.96■■■□□ 2.71
MMS19-211ENST00000441194 RAD54L2Q9Y4B4 1467 aa31.94■■■□□ 2.7
MMS19-211ENST00000441194 SOGA1O94964 1423 aa31.91■■■□□ 2.7
MMS19-211ENST00000441194 WDR97A6NE52 1622 aa31.89■■■□□ 2.7
MMS19-211ENST00000441194 EIF4G3O43432 1585 aaKnown RBP31.89■■■□□ 2.7
MMS19-211ENST00000441194 AQRO60306 1485 aaKnown RBP eCLIP31.76■■■□□ 2.676e-8■■■■■ 26.8
MMS19-211ENST00000441194 ABCA10Q8WWZ4 1543 aa31.75■■■□□ 2.67
MMS19-211ENST00000441194 TDRD9Q8NDG6 1382 aaKnown RBP31.7■■■□□ 2.67
MMS19-211ENST00000441194 ABCA5Q8WWZ7 1642 aa31.67■■■□□ 2.66
MMS19-211ENST00000441194 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
MMS19-211ENST00000441194 GAPVD1Q14C86 1478 aa31.58■■■□□ 2.65
MMS19-211ENST00000441194 GRIN2BQ13224 1484 aa31.55■■■□□ 2.64
MMS19-211ENST00000441194 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
MMS19-211ENST00000441194 SNAPC4Q5SXM2 1469 aa31.51■■■□□ 2.63
MMS19-211ENST00000441194 CHD1O14646 1710 aa31.49■■■□□ 2.63
MMS19-211ENST00000441194 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
MMS19-211ENST00000441194 ERICH3Q5RHP9 1530 aa31.38■■■□□ 2.61
MMS19-211ENST00000441194 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
MMS19-211ENST00000441194 ADAMTS12P58397 1594 aa31.34■■■□□ 2.61
MMS19-211ENST00000441194 SYNJ2O15056 1496 aa31.33■■■□□ 2.61
MMS19-211ENST00000441194 KIF27Q86VH2 1401 aa31.29■■■□□ 2.6
MMS19-211ENST00000441194 FBLN2P98095 1184 aa31.22■■■□□ 2.59
MMS19-211ENST00000441194 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
MMS19-211ENST00000441194 FHAD1B1AJZ9 1412 aa31.22■■■□□ 2.59
MMS19-211ENST00000441194 CHMP7Q8WUX9 453 aaPredicted RBP31.2■■■□□ 2.59
MMS19-211ENST00000441194 GRIN2AQ12879 1464 aa31.17■■■□□ 2.58
MMS19-211ENST00000441194 IGF1RP08069 1367 aa31.16■■■□□ 2.58
MMS19-211ENST00000441194 CUL7Q14999 1698 aa31.14■■■□□ 2.58
MMS19-211ENST00000441194 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.57
MMS19-211ENST00000441194 RUSC2Q8N2Y8 1516 aa31.11■■■□□ 2.57
MMS19-211ENST00000441194 NUP160Q12769 1436 aa31.06■■■□□ 2.56
MMS19-211ENST00000441194 CEP170Q5SW79 1584 aa31.05■■■□□ 2.56
MMS19-211ENST00000441194 CHIC1Q5VXU3 224 aa31.02■■■□□ 2.56
MMS19-211ENST00000441194 CARMIL1Q5VZK9 1371 aa30.96■■■□□ 2.55
MMS19-211ENST00000441194 RIMBP3CA6NJZ7 1639 aa30.96■■■□□ 2.55
MMS19-211ENST00000441194 RIMBP3BA6NNM3 1639 aa30.96■■■□□ 2.55
MMS19-211ENST00000441194 RIMBP3Q9UFD9 1639 aa30.96■■■□□ 2.55
MMS19-211ENST00000441194 ARHGEF11O15085 1522 aa30.94■■■□□ 2.54
MMS19-211ENST00000441194 SHROOM2Q13796 1616 aa30.85■■■□□ 2.53
MMS19-211ENST00000441194 RAPGEF2Q9Y4G8 1499 aa30.82■■■□□ 2.52
MMS19-211ENST00000441194 EEA1Q15075 1411 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms