RNA–Protein interactions for RNA: ENST00000441036.1

LINC01104-201, Transcript of long intergenic non-protein coding RNA 1104, humanhuman

TSL 4

Gene LINC01104, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01104-201ENST00000441036 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
LINC01104-201ENST00000441036 CCDC180Q9P1Z9 1646 aa25.17■■□□□ 1.62
LINC01104-201ENST00000441036 ABCC9O60706 1549 aa25.09■■□□□ 1.61
LINC01104-201ENST00000441036 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
LINC01104-201ENST00000441036 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
LINC01104-201ENST00000441036 NACADO15069 1562 aa23.83■■□□□ 1.41
LINC01104-201ENST00000441036 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.36
LINC01104-201ENST00000441036 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
LINC01104-201ENST00000441036 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
LINC01104-201ENST00000441036 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
LINC01104-201ENST00000441036 UNC13AQ9UPW8 1703 aa23.38■■□□□ 1.33
LINC01104-201ENST00000441036 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
LINC01104-201ENST00000441036 BICRAQ9NZM4 1560 aa23.25■■□□□ 1.31
LINC01104-201ENST00000441036 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
LINC01104-201ENST00000441036 SHROOM4Q9ULL8 1493 aa22.88■■□□□ 1.25
LINC01104-201ENST00000441036 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
LINC01104-201ENST00000441036 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
LINC01104-201ENST00000441036 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.2
LINC01104-201ENST00000441036 NCAPD3P42695 1498 aa22.06■■□□□ 1.12
LINC01104-201ENST00000441036 ATAD2BQ9ULI0 1458 aa22■■□□□ 1.11
LINC01104-201ENST00000441036 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
LINC01104-201ENST00000441036 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
LINC01104-201ENST00000441036 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
LINC01104-201ENST00000441036 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
LINC01104-201ENST00000441036 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
LINC01104-201ENST00000441036 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
LINC01104-201ENST00000441036 BAZ1BQ9UIG0 1483 aaKnown RBP21.75■■□□□ 1.07
LINC01104-201ENST00000441036 NESP48681 1621 aa21.62■■□□□ 1.05
LINC01104-201ENST00000441036 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
LINC01104-201ENST00000441036 WIZO95785 1651 aa21.52■■□□□ 1.04
LINC01104-201ENST00000441036 CUX2O14529 1486 aa21.51■■□□□ 1.03
LINC01104-201ENST00000441036 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
LINC01104-201ENST00000441036 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
LINC01104-201ENST00000441036 DNAJC5Q9H3Z4 198 aa21.44■■□□□ 1.02
LINC01104-201ENST00000441036 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
LINC01104-201ENST00000441036 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
LINC01104-201ENST00000441036 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
LINC01104-201ENST00000441036 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
LINC01104-201ENST00000441036 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
LINC01104-201ENST00000441036 CFTRP13569 1480 aa21.18■□□□□ 0.98
LINC01104-201ENST00000441036 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
LINC01104-201ENST00000441036 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
LINC01104-201ENST00000441036 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
LINC01104-201ENST00000441036 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
LINC01104-201ENST00000441036 WDR62O43379 1518 aa21.05■□□□□ 0.96
LINC01104-201ENST00000441036 URB2Q14146 1524 aaKnown RBP20.92■□□□□ 0.94
LINC01104-201ENST00000441036 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
LINC01104-201ENST00000441036 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
LINC01104-201ENST00000441036 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
LINC01104-201ENST00000441036 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
LINC01104-201ENST00000441036 OSCARQ8IYS5 282 aa20.71■□□□□ 0.91
LINC01104-201ENST00000441036 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
LINC01104-201ENST00000441036 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
LINC01104-201ENST00000441036 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
LINC01104-201ENST00000441036 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.88
LINC01104-201ENST00000441036 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
LINC01104-201ENST00000441036 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
LINC01104-201ENST00000441036 TARBP1Q13395 1621 aaKnown RBP20.51■□□□□ 0.87
LINC01104-201ENST00000441036 SOGA1O94964 1423 aa20.51■□□□□ 0.87
LINC01104-201ENST00000441036 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
LINC01104-201ENST00000441036 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
LINC01104-201ENST00000441036 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
LINC01104-201ENST00000441036 CUX1P39880 1505 aa20.43■□□□□ 0.86
LINC01104-201ENST00000441036 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
LINC01104-201ENST00000441036 FBLN2P98095 1184 aa20.39■□□□□ 0.85
LINC01104-201ENST00000441036 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
LINC01104-201ENST00000441036 CHD1O14646 1710 aa20.27■□□□□ 0.84
LINC01104-201ENST00000441036 WDR97A6NE52 1622 aa20.27■□□□□ 0.83
LINC01104-201ENST00000441036 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.83
LINC01104-201ENST00000441036 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.83
LINC01104-201ENST00000441036 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.83
LINC01104-201ENST00000441036 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
LINC01104-201ENST00000441036 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
LINC01104-201ENST00000441036 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
LINC01104-201ENST00000441036 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
LINC01104-201ENST00000441036 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
LINC01104-201ENST00000441036 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
LINC01104-201ENST00000441036 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
LINC01104-201ENST00000441036 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
LINC01104-201ENST00000441036 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
LINC01104-201ENST00000441036 SYNJ2O15056 1496 aa20.14■□□□□ 0.81
LINC01104-201ENST00000441036 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
LINC01104-201ENST00000441036 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
LINC01104-201ENST00000441036 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
LINC01104-201ENST00000441036 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
LINC01104-201ENST00000441036 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
LINC01104-201ENST00000441036 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
LINC01104-201ENST00000441036 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
LINC01104-201ENST00000441036 GRIN2AQ12879 1464 aa19.97■□□□□ 0.79
LINC01104-201ENST00000441036 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
LINC01104-201ENST00000441036 NUP160Q12769 1436 aa19.92■□□□□ 0.78
LINC01104-201ENST00000441036 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
LINC01104-201ENST00000441036 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
LINC01104-201ENST00000441036 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
LINC01104-201ENST00000441036 IGF1RP08069 1367 aa19.86■□□□□ 0.77
LINC01104-201ENST00000441036 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
LINC01104-201ENST00000441036 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
LINC01104-201ENST00000441036 ERCC6L2Q5T890 1561 aa19.81■□□□□ 0.76
LINC01104-201ENST00000441036 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
LINC01104-201ENST00000441036 PRG4Q92954 1404 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms