RNA–Protein interactions for RNA: ENST00000441017.5

TSPAN12-206, Transcript of tetraspanin 12, humanhuman

TSL 4

Gene TSPAN12, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN12-206ENST00000441017 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
TSPAN12-206ENST00000441017 ABCC9O60706 1549 aa21.19■□□□□ 0.98
TSPAN12-206ENST00000441017 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
TSPAN12-206ENST00000441017 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
TSPAN12-206ENST00000441017 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
TSPAN12-206ENST00000441017 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
TSPAN12-206ENST00000441017 NACADO15069 1562 aa19.47■□□□□ 0.71
TSPAN12-206ENST00000441017 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
TSPAN12-206ENST00000441017 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
TSPAN12-206ENST00000441017 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
TSPAN12-206ENST00000441017 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
TSPAN12-206ENST00000441017 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
TSPAN12-206ENST00000441017 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
TSPAN12-206ENST00000441017 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
TSPAN12-206ENST00000441017 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
TSPAN12-206ENST00000441017 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
TSPAN12-206ENST00000441017 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
TSPAN12-206ENST00000441017 CUX2O14529 1486 aa18.57■□□□□ 0.56
TSPAN12-206ENST00000441017 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
TSPAN12-206ENST00000441017 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
TSPAN12-206ENST00000441017 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
TSPAN12-206ENST00000441017 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
TSPAN12-206ENST00000441017 NCAPD3P42695 1498 aa17.99■□□□□ 0.47
TSPAN12-206ENST00000441017 NESP48681 1621 aa17.98■□□□□ 0.47
TSPAN12-206ENST00000441017 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
TSPAN12-206ENST00000441017 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
TSPAN12-206ENST00000441017 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
TSPAN12-206ENST00000441017 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
TSPAN12-206ENST00000441017 LAMC3Q9Y6N6 1575 aa17.71■□□□□ 0.43
TSPAN12-206ENST00000441017 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
TSPAN12-206ENST00000441017 PDS5BQ9NTI5 1447 aa17.65■□□□□ 0.42
TSPAN12-206ENST00000441017 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
TSPAN12-206ENST00000441017 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
TSPAN12-206ENST00000441017 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
TSPAN12-206ENST00000441017 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
TSPAN12-206ENST00000441017 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
TSPAN12-206ENST00000441017 WDR62O43379 1518 aa17.53■□□□□ 0.4
TSPAN12-206ENST00000441017 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
TSPAN12-206ENST00000441017 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
TSPAN12-206ENST00000441017 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
TSPAN12-206ENST00000441017 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
TSPAN12-206ENST00000441017 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
TSPAN12-206ENST00000441017 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
TSPAN12-206ENST00000441017 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
TSPAN12-206ENST00000441017 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
TSPAN12-206ENST00000441017 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
TSPAN12-206ENST00000441017 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
TSPAN12-206ENST00000441017 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
TSPAN12-206ENST00000441017 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
TSPAN12-206ENST00000441017 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
TSPAN12-206ENST00000441017 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
TSPAN12-206ENST00000441017 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
TSPAN12-206ENST00000441017 CFTRP13569 1480 aa17.06■□□□□ 0.32
TSPAN12-206ENST00000441017 IFT140Q96RY7 1462 aa17.01■□□□□ 0.31
TSPAN12-206ENST00000441017 WIZO95785 1651 aa16.98■□□□□ 0.31
TSPAN12-206ENST00000441017 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
TSPAN12-206ENST00000441017 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
TSPAN12-206ENST00000441017 CHD1O14646 1710 aa16.9■□□□□ 0.3
TSPAN12-206ENST00000441017 FBLN2P98095 1184 aa16.86■□□□□ 0.29
TSPAN12-206ENST00000441017 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
TSPAN12-206ENST00000441017 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
TSPAN12-206ENST00000441017 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
TSPAN12-206ENST00000441017 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
TSPAN12-206ENST00000441017 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
TSPAN12-206ENST00000441017 CLASP1Q7Z460 1538 aa16.73■□□□□ 0.27
TSPAN12-206ENST00000441017 ABCC8Q09428 1581 aa16.7■□□□□ 0.26
TSPAN12-206ENST00000441017 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
TSPAN12-206ENST00000441017 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
TSPAN12-206ENST00000441017 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
TSPAN12-206ENST00000441017 SNAPC4Q5SXM2 1469 aa16.64■□□□□ 0.25
TSPAN12-206ENST00000441017 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
TSPAN12-206ENST00000441017 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
TSPAN12-206ENST00000441017 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
TSPAN12-206ENST00000441017 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
TSPAN12-206ENST00000441017 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
TSPAN12-206ENST00000441017 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
TSPAN12-206ENST00000441017 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
TSPAN12-206ENST00000441017 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
TSPAN12-206ENST00000441017 SOGA1O94964 1423 aa16.5■□□□□ 0.23
TSPAN12-206ENST00000441017 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
TSPAN12-206ENST00000441017 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
TSPAN12-206ENST00000441017 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
TSPAN12-206ENST00000441017 ERCC6L2Q5T890 1561 aa16.42■□□□□ 0.22
TSPAN12-206ENST00000441017 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
TSPAN12-206ENST00000441017 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
TSPAN12-206ENST00000441017 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
TSPAN12-206ENST00000441017 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
TSPAN12-206ENST00000441017 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
TSPAN12-206ENST00000441017 KDM6BO15054 1643 aa16.27■□□□□ 0.2
TSPAN12-206ENST00000441017 ABCC10Q5T3U5 1492 aa16.26■□□□□ 0.19
TSPAN12-206ENST00000441017 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
TSPAN12-206ENST00000441017 CUX1P39880 1505 aa16.24■□□□□ 0.19
TSPAN12-206ENST00000441017 NUP160Q12769 1436 aa16.22■□□□□ 0.19
TSPAN12-206ENST00000441017 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
TSPAN12-206ENST00000441017 SHROOM2Q13796 1616 aa16.2■□□□□ 0.18
TSPAN12-206ENST00000441017 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
TSPAN12-206ENST00000441017 HECW2Q9P2P5 1572 aa16.17■□□□□ 0.18
TSPAN12-206ENST00000441017 MAPKBP1O60336 1514 aa16.17■□□□□ 0.18
TSPAN12-206ENST00000441017 ADGRL1O94910 1474 aa16.16■□□□□ 0.18
TSPAN12-206ENST00000441017 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms