RNA–Protein interactions for RNA: ENST00000440889.1

AL035250.2-201, humanhuman

TSL 3 BASIC

Gene AL035250.2, Length 620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL035250.2-201ENST00000440889 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
AL035250.2-201ENST00000440889 ABCC9O60706 1549 aa25.63■■□□□ 1.69
AL035250.2-201ENST00000440889 CCDC180Q9P1Z9 1646 aa25.13■■□□□ 1.61
AL035250.2-201ENST00000440889 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
AL035250.2-201ENST00000440889 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
AL035250.2-201ENST00000440889 NACADO15069 1562 aa23.88■■□□□ 1.41
AL035250.2-201ENST00000440889 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
AL035250.2-201ENST00000440889 DCAF8L2P0C7V8 631 aa23.66■■□□□ 1.38
AL035250.2-201ENST00000440889 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
AL035250.2-201ENST00000440889 BICRAQ9NZM4 1560 aa23.43■■□□□ 1.34
AL035250.2-201ENST00000440889 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
AL035250.2-201ENST00000440889 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
AL035250.2-201ENST00000440889 SHROOM4Q9ULL8 1493 aa23.15■■□□□ 1.3
AL035250.2-201ENST00000440889 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
AL035250.2-201ENST00000440889 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
AL035250.2-201ENST00000440889 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
AL035250.2-201ENST00000440889 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
AL035250.2-201ENST00000440889 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
AL035250.2-201ENST00000440889 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
AL035250.2-201ENST00000440889 CUX2O14529 1486 aa22.33■■□□□ 1.16
AL035250.2-201ENST00000440889 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
AL035250.2-201ENST00000440889 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
AL035250.2-201ENST00000440889 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
AL035250.2-201ENST00000440889 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
AL035250.2-201ENST00000440889 SMARCA2P51531 1590 aa21.83■■□□□ 1.09
AL035250.2-201ENST00000440889 NESP48681 1621 aa21.83■■□□□ 1.08
AL035250.2-201ENST00000440889 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
AL035250.2-201ENST00000440889 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
AL035250.2-201ENST00000440889 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
AL035250.2-201ENST00000440889 BAZ1BQ9UIG0 1483 aaKnown RBP21.68■■□□□ 1.06
AL035250.2-201ENST00000440889 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
AL035250.2-201ENST00000440889 BAZ1AQ9NRL2 1556 aaPredicted RBP21.58■■□□□ 1.05
AL035250.2-201ENST00000440889 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
AL035250.2-201ENST00000440889 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
AL035250.2-201ENST00000440889 PEG3Q9GZU2 1588 aa21.53■■□□□ 1.04
AL035250.2-201ENST00000440889 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
AL035250.2-201ENST00000440889 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
AL035250.2-201ENST00000440889 WDR62O43379 1518 aa21.34■■□□□ 1.01
AL035250.2-201ENST00000440889 MROH2BQ7Z745 1585 aa21.32■■□□□ 1
AL035250.2-201ENST00000440889 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
AL035250.2-201ENST00000440889 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
AL035250.2-201ENST00000440889 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
AL035250.2-201ENST00000440889 WIZO95785 1651 aa21.05■□□□□ 0.96
AL035250.2-201ENST00000440889 CFTRP13569 1480 aa20.98■□□□□ 0.95
AL035250.2-201ENST00000440889 RIMBP3CA6NJZ7 1639 aa20.97■□□□□ 0.95
AL035250.2-201ENST00000440889 RIMBP3BA6NNM3 1639 aa20.97■□□□□ 0.95
AL035250.2-201ENST00000440889 RIMBP3Q9UFD9 1639 aa20.97■□□□□ 0.95
AL035250.2-201ENST00000440889 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
AL035250.2-201ENST00000440889 ARHGEF11O15085 1522 aa20.86■□□□□ 0.93
AL035250.2-201ENST00000440889 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
AL035250.2-201ENST00000440889 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
AL035250.2-201ENST00000440889 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
AL035250.2-201ENST00000440889 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
AL035250.2-201ENST00000440889 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
AL035250.2-201ENST00000440889 TRHP20396 242 aaPredicted RBP20.73■□□□□ 0.91
AL035250.2-201ENST00000440889 RSF1Q96T23 1441 aaPredicted RBP20.69■□□□□ 0.9
AL035250.2-201ENST00000440889 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
AL035250.2-201ENST00000440889 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
AL035250.2-201ENST00000440889 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
AL035250.2-201ENST00000440889 ARAP1Q96P48 1450 aa20.6■□□□□ 0.89
AL035250.2-201ENST00000440889 CHD1O14646 1710 aa20.59■□□□□ 0.89
AL035250.2-201ENST00000440889 FBLN2P98095 1184 aa20.55■□□□□ 0.88
AL035250.2-201ENST00000440889 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
AL035250.2-201ENST00000440889 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
AL035250.2-201ENST00000440889 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
AL035250.2-201ENST00000440889 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.88
AL035250.2-201ENST00000440889 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
AL035250.2-201ENST00000440889 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
AL035250.2-201ENST00000440889 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
AL035250.2-201ENST00000440889 SYNJ1O43426 1573 aa20.33■□□□□ 0.84
AL035250.2-201ENST00000440889 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
AL035250.2-201ENST00000440889 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
AL035250.2-201ENST00000440889 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
AL035250.2-201ENST00000440889 SOGA1O94964 1423 aa20.3■□□□□ 0.84
AL035250.2-201ENST00000440889 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
AL035250.2-201ENST00000440889 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
AL035250.2-201ENST00000440889 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
AL035250.2-201ENST00000440889 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
AL035250.2-201ENST00000440889 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
AL035250.2-201ENST00000440889 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
AL035250.2-201ENST00000440889 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
AL035250.2-201ENST00000440889 CUX1P39880 1505 aa20.07■□□□□ 0.8
AL035250.2-201ENST00000440889 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
AL035250.2-201ENST00000440889 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
AL035250.2-201ENST00000440889 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
AL035250.2-201ENST00000440889 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
AL035250.2-201ENST00000440889 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
AL035250.2-201ENST00000440889 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
AL035250.2-201ENST00000440889 NUP160Q12769 1436 aa19.86■□□□□ 0.77
AL035250.2-201ENST00000440889 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
AL035250.2-201ENST00000440889 KIF13AQ9H1H9 1805 aa19.85■□□□□ 0.77
AL035250.2-201ENST00000440889 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
AL035250.2-201ENST00000440889 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
AL035250.2-201ENST00000440889 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
AL035250.2-201ENST00000440889 FAM69CQ0P6D2 419 aa19.74■□□□□ 0.75
AL035250.2-201ENST00000440889 PRG4Q92954 1404 aaPredicted RBP19.74■□□□□ 0.75
AL035250.2-201ENST00000440889 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
AL035250.2-201ENST00000440889 ABCC10Q5T3U5 1492 aa19.72■□□□□ 0.75
AL035250.2-201ENST00000440889 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
AL035250.2-201ENST00000440889 MAPKBP1O60336 1514 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms