RNA–Protein interactions for RNA: ENST00000440873.5

MEN1-213, Transcript of menin 1, humanhuman

TSL 5

Gene MEN1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-213ENST00000440873 NISCHQ9Y2I1 1504 aa47.44■■■■■ 5.18
MEN1-213ENST00000440873 CCDC180Q9P1Z9 1646 aa42.59■■■■■ 4.41
MEN1-213ENST00000440873 ABCC9O60706 1549 aa42.43■■■■■ 4.38
MEN1-213ENST00000440873 RB1CC1Q8TDY2 1594 aa40.52■■■■■ 4.08
MEN1-213ENST00000440873 NACADO15069 1562 aa40.3■■■■■ 4.04
MEN1-213ENST00000440873 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
MEN1-213ENST00000440873 DCAF8L2P0C7V8 631 aa39.86■■■■□ 3.97
MEN1-213ENST00000440873 DNAJC5BQ9UF47 199 aa39.85■■■■□ 3.97
MEN1-213ENST00000440873 UNC13AQ9UPW8 1703 aa39.51■■■■□ 3.91
MEN1-213ENST00000440873 PABPN1Q86U42 306 aaKnown RBP eCLIP39.49■■■■□ 3.91
MEN1-213ENST00000440873 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
MEN1-213ENST00000440873 BICRAQ9NZM4 1560 aa39.31■■■■□ 3.88
MEN1-213ENST00000440873 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
MEN1-213ENST00000440873 SHROOM4Q9ULL8 1493 aa38.96■■■■□ 3.83
MEN1-213ENST00000440873 SCRIBQ14160 1630 aa38.63■■■■□ 3.78
MEN1-213ENST00000440873 CC2D2AQ9P2K1 1620 aa38.39■■■■□ 3.74
MEN1-213ENST00000440873 EIF4G1Q04637 1599 aaKnown RBP38.34■■■■□ 3.73
MEN1-213ENST00000440873 CECR2Q9BXF3 1484 aa38.3■■■■□ 3.72
MEN1-213ENST00000440873 NCAPD3P42695 1498 aa37.22■■■■□ 3.55
MEN1-213ENST00000440873 ATAD2BQ9ULI0 1458 aa37.04■■■■□ 3.52
MEN1-213ENST00000440873 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
MEN1-213ENST00000440873 SMARCA2P51531 1590 aa36.96■■■■□ 3.51
MEN1-213ENST00000440873 HMGXB3Q12766 1538 aa36.91■■■■□ 3.5
MEN1-213ENST00000440873 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
MEN1-213ENST00000440873 CUX2O14529 1486 aa36.73■■■■□ 3.47
MEN1-213ENST00000440873 PEG3Q9GZU2 1588 aa36.72■■■■□ 3.47
MEN1-213ENST00000440873 DNAJC5Q9H3Z4 198 aa36.7■■■■□ 3.47
MEN1-213ENST00000440873 ERCC6Q03468 1493 aa36.67■■■■□ 3.46
MEN1-213ENST00000440873 BAZ1BQ9UIG0 1483 aaKnown RBP36.64■■■■□ 3.46
MEN1-213ENST00000440873 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
MEN1-213ENST00000440873 NESP48681 1621 aa36.45■■■■□ 3.43
MEN1-213ENST00000440873 LAMC3Q9Y6N6 1575 aa36.33■■■■□ 3.41
MEN1-213ENST00000440873 THOC2Q8NI27 1593 aaKnown RBP36.15■■■■□ 3.38
MEN1-213ENST00000440873 PDS5BQ9NTI5 1447 aa36.14■■■■□ 3.38
MEN1-213ENST00000440873 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
MEN1-213ENST00000440873 WIZO95785 1651 aa36■■■■□ 3.35
MEN1-213ENST00000440873 KIF21AQ7Z4S6 1674 aa35.98■■■■□ 3.35
MEN1-213ENST00000440873 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
MEN1-213ENST00000440873 MRC2Q9UBG0 1479 aa35.77■■■■□ 3.32
MEN1-213ENST00000440873 WDR62O43379 1518 aa35.7■■■■□ 3.31
MEN1-213ENST00000440873 CFTRP13569 1480 aa35.65■■■■□ 3.3
MEN1-213ENST00000440873 TOP2AP11388 1531 aaKnown RBP35.63■■■■□ 3.29
MEN1-213ENST00000440873 CEP164Q9UPV0 1460 aa35.61■■■■□ 3.29
MEN1-213ENST00000440873 FANCD2Q9BXW9 1451 aa35.58■■■■□ 3.29
MEN1-213ENST00000440873 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
MEN1-213ENST00000440873 PRDM2Q13029 1718 aa35.23■■■■□ 3.23
MEN1-213ENST00000440873 CCDC88BA6NC98 1476 aa35.22■■■■□ 3.23
MEN1-213ENST00000440873 OSCARQ8IYS5 282 aa35.03■■■■□ 3.2
MEN1-213ENST00000440873 IFT140Q96RY7 1462 aa34.95■■■■□ 3.19
MEN1-213ENST00000440873 ABCC8Q09428 1581 aa34.95■■■■□ 3.18
MEN1-213ENST00000440873 TOPBP1Q92547 1522 aa34.91■■■■□ 3.18
MEN1-213ENST00000440873 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
MEN1-213ENST00000440873 ZNF608Q9ULD9 1512 aaPredicted RBP34.81■■■■□ 3.16
MEN1-213ENST00000440873 DNMBPQ6XZF7 1577 aa34.79■■■■□ 3.16
MEN1-213ENST00000440873 TARBP1Q13395 1621 aaKnown RBP34.61■■■■□ 3.13
MEN1-213ENST00000440873 EIF4G3O43432 1585 aaKnown RBP34.61■■■■□ 3.13
MEN1-213ENST00000440873 POLA1P09884 1462 aaPredicted RBP34.56■■■■□ 3.12
MEN1-213ENST00000440873 AQRO60306 1485 aaKnown RBP eCLIP34.5■■■■□ 3.112e-6■■■■■ 31.7
MEN1-213ENST00000440873 RIMBP3CA6NJZ7 1639 aa34.48■■■■□ 3.11
MEN1-213ENST00000440873 RIMBP3BA6NNM3 1639 aa34.48■■■■□ 3.11
MEN1-213ENST00000440873 RIMBP3Q9UFD9 1639 aa34.48■■■■□ 3.11
MEN1-213ENST00000440873 SOGA1O94964 1423 aa34.41■■■■□ 3.1
MEN1-213ENST00000440873 ARHGEF11O15085 1522 aa34.4■■■■□ 3.1
MEN1-213ENST00000440873 WDR97A6NE52 1622 aa34.37■■■■□ 3.09
MEN1-213ENST00000440873 RAD54L2Q9Y4B4 1467 aa34.37■■■■□ 3.09
MEN1-213ENST00000440873 CHD1O14646 1710 aa34.32■■■■□ 3.08
MEN1-213ENST00000440873 FGD5Q6ZNL6 1462 aa34.31■■■■□ 3.08
MEN1-213ENST00000440873 TDRD9Q8NDG6 1382 aaKnown RBP34.29■■■■□ 3.08
MEN1-213ENST00000440873 CUX1P39880 1505 aa34.28■■■■□ 3.08
MEN1-213ENST00000440873 FBLN2P98095 1184 aa34.21■■■■□ 3.07
MEN1-213ENST00000440873 MAGI1Q96QZ7 1491 aaPredicted RBP34.15■■■■□ 3.06
MEN1-213ENST00000440873 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
MEN1-213ENST00000440873 GRIN2BQ13224 1484 aa34.13■■■■□ 3.05
MEN1-213ENST00000440873 CYB5RLQ6IPT4 315 aa34.12■■■■□ 3.05
MEN1-213ENST00000440873 CHMP7Q8WUX9 453 aaPredicted RBP34.06■■■■□ 3.04
MEN1-213ENST00000440873 ARAP1Q96P48 1450 aa34.06■■■■□ 3.04
MEN1-213ENST00000440873 SUPT5HO00267 1087 aaKnown RBP34.05■■■■□ 3.04
MEN1-213ENST00000440873 SYNJ2O15056 1496 aa34.02■■■■□ 3.04
MEN1-213ENST00000440873 CLASP1Q7Z460 1538 aa34.02■■■■□ 3.04
MEN1-213ENST00000440873 ABCA10Q8WWZ4 1543 aa34■■■■□ 3.03
MEN1-213ENST00000440873 SYNJ1O43426 1573 aa34■■■■□ 3.03
MEN1-213ENST00000440873 GAPVD1Q14C86 1478 aa33.99■■■■□ 3.03
MEN1-213ENST00000440873 ABCA5Q8WWZ7 1642 aa33.9■■■■□ 3.02
MEN1-213ENST00000440873 PBRM1Q86U86 1689 aa33.9■■■■□ 3.02
MEN1-213ENST00000440873 WRNQ14191 1432 aaPredicted RBP eCLIP33.86■■■■□ 3.01
MEN1-213ENST00000440873 TOP2BQ02880 1626 aa33.78■■■■□ 3
MEN1-213ENST00000440873 BIVM-ERCC5R4GMW8 1640 aa33.76■■■■□ 3
MEN1-213ENST00000440873 TRHP20396 242 aaPredicted RBP33.69■■■□□ 2.98
MEN1-213ENST00000440873 GRIN2AQ12879 1464 aa33.67■■■□□ 2.98
MEN1-213ENST00000440873 ADAMTS12P58397 1594 aa33.62■■■□□ 2.97
MEN1-213ENST00000440873 NUP160Q12769 1436 aa33.6■■■□□ 2.97
MEN1-213ENST00000440873 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
MEN1-213ENST00000440873 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
MEN1-213ENST00000440873 CEP170Q5SW79 1584 aa33.5■■■□□ 2.95
MEN1-213ENST00000440873 SHROOM2Q13796 1616 aa33.43■■■□□ 2.94
MEN1-213ENST00000440873 ERCC6L2Q5T890 1561 aa33.39■■■□□ 2.94
MEN1-213ENST00000440873 JPH4Q96JJ6 628 aa33.24■■■□□ 2.91
MEN1-213ENST00000440873 PRG4Q92954 1404 aaPredicted RBP33.21■■■□□ 2.91
MEN1-213ENST00000440873 IGF1RP08069 1367 aa33.15■■■□□ 2.9
MEN1-213ENST00000440873 RUSC2Q8N2Y8 1516 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms