RNA–Protein interactions for RNA: ENST00000440794.2

ITSN1-218, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 936 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-218ENST00000440794 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
ITSN1-218ENST00000440794 CCDC180Q9P1Z9 1646 aa19.61■□□□□ 0.73
ITSN1-218ENST00000440794 ABCC9O60706 1549 aa19.56■□□□□ 0.72
ITSN1-218ENST00000440794 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
ITSN1-218ENST00000440794 NACADO15069 1562 aa18.58■□□□□ 0.56
ITSN1-218ENST00000440794 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
ITSN1-218ENST00000440794 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
ITSN1-218ENST00000440794 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
ITSN1-218ENST00000440794 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
ITSN1-218ENST00000440794 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
ITSN1-218ENST00000440794 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
ITSN1-218ENST00000440794 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
ITSN1-218ENST00000440794 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.48
ITSN1-218ENST00000440794 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
ITSN1-218ENST00000440794 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
ITSN1-218ENST00000440794 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
ITSN1-218ENST00000440794 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
ITSN1-218ENST00000440794 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
ITSN1-218ENST00000440794 NCAPD3P42695 1498 aa17.17■□□□□ 0.34
ITSN1-218ENST00000440794 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
ITSN1-218ENST00000440794 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
ITSN1-218ENST00000440794 SMARCA4P51532 1647 aa17.05■□□□□ 0.32
ITSN1-218ENST00000440794 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
ITSN1-218ENST00000440794 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
ITSN1-218ENST00000440794 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
ITSN1-218ENST00000440794 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
ITSN1-218ENST00000440794 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
ITSN1-218ENST00000440794 CUX2O14529 1486 aa16.88■□□□□ 0.29
ITSN1-218ENST00000440794 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
ITSN1-218ENST00000440794 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
ITSN1-218ENST00000440794 NESP48681 1621 aa16.8■□□□□ 0.28
ITSN1-218ENST00000440794 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
ITSN1-218ENST00000440794 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
ITSN1-218ENST00000440794 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
ITSN1-218ENST00000440794 WIZO95785 1651 aa16.64■□□□□ 0.25
ITSN1-218ENST00000440794 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
ITSN1-218ENST00000440794 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.24
ITSN1-218ENST00000440794 KIF21AQ7Z4S6 1674 aa16.55■□□□□ 0.24
ITSN1-218ENST00000440794 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
ITSN1-218ENST00000440794 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
ITSN1-218ENST00000440794 CFTRP13569 1480 aa16.46■□□□□ 0.23
ITSN1-218ENST00000440794 CEP164Q9UPV0 1460 aa16.44■□□□□ 0.22
ITSN1-218ENST00000440794 WDR62O43379 1518 aa16.44■□□□□ 0.22
ITSN1-218ENST00000440794 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
ITSN1-218ENST00000440794 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
ITSN1-218ENST00000440794 URB2Q14146 1524 aaKnown RBP16.26■□□□□ 0.19
ITSN1-218ENST00000440794 PRDM2Q13029 1718 aa16.21■□□□□ 0.19
ITSN1-218ENST00000440794 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
ITSN1-218ENST00000440794 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
ITSN1-218ENST00000440794 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
ITSN1-218ENST00000440794 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
ITSN1-218ENST00000440794 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
ITSN1-218ENST00000440794 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
ITSN1-218ENST00000440794 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
ITSN1-218ENST00000440794 AQRO60306 1485 aaKnown RBP eCLIP15.95■□□□□ 0.14
ITSN1-218ENST00000440794 POLA1P09884 1462 aaPredicted RBP15.95■□□□□ 0.14
ITSN1-218ENST00000440794 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
ITSN1-218ENST00000440794 EIF4G3O43432 1585 aaKnown RBP15.94■□□□□ 0.14
ITSN1-218ENST00000440794 SOGA1O94964 1423 aa15.93■□□□□ 0.14
ITSN1-218ENST00000440794 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
ITSN1-218ENST00000440794 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
ITSN1-218ENST00000440794 FBLN2P98095 1184 aa15.87■□□□□ 0.13
ITSN1-218ENST00000440794 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
ITSN1-218ENST00000440794 FGD5Q6ZNL6 1462 aa15.85■□□□□ 0.13
ITSN1-218ENST00000440794 CUX1P39880 1505 aa15.84■□□□□ 0.13
ITSN1-218ENST00000440794 WDR97A6NE52 1622 aa15.83■□□□□ 0.13
ITSN1-218ENST00000440794 RIMBP3CA6NJZ7 1639 aa15.83■□□□□ 0.13
ITSN1-218ENST00000440794 RIMBP3BA6NNM3 1639 aa15.83■□□□□ 0.13
ITSN1-218ENST00000440794 RIMBP3Q9UFD9 1639 aa15.83■□□□□ 0.13
ITSN1-218ENST00000440794 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
ITSN1-218ENST00000440794 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
ITSN1-218ENST00000440794 CHD1O14646 1710 aa15.78■□□□□ 0.12
ITSN1-218ENST00000440794 CYB5RLQ6IPT4 315 aa15.77■□□□□ 0.12
ITSN1-218ENST00000440794 GRIN2BQ13224 1484 aa15.77■□□□□ 0.11
ITSN1-218ENST00000440794 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
ITSN1-218ENST00000440794 MAGI1Q96QZ7 1491 aaPredicted RBP15.76■□□□□ 0.11
ITSN1-218ENST00000440794 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
ITSN1-218ENST00000440794 ABCA10Q8WWZ4 1543 aa15.71■□□□□ 0.11
ITSN1-218ENST00000440794 SYNJ2O15056 1496 aa15.71■□□□□ 0.1
ITSN1-218ENST00000440794 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
ITSN1-218ENST00000440794 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
ITSN1-218ENST00000440794 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
ITSN1-218ENST00000440794 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
ITSN1-218ENST00000440794 TOP2BQ02880 1626 aa15.62■□□□□ 0.09
ITSN1-218ENST00000440794 ABCA5Q8WWZ7 1642 aa15.62■□□□□ 0.09
ITSN1-218ENST00000440794 PBRM1Q86U86 1689 aa15.62■□□□□ 0.09
ITSN1-218ENST00000440794 BIVM-ERCC5R4GMW8 1640 aa15.59■□□□□ 0.09
ITSN1-218ENST00000440794 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
ITSN1-218ENST00000440794 GRIN2AQ12879 1464 aa15.54■□□□□ 0.08
ITSN1-218ENST00000440794 FHAD1B1AJZ9 1412 aa15.53■□□□□ 0.08
ITSN1-218ENST00000440794 ERICH3Q5RHP9 1530 aa15.52■□□□□ 0.07
ITSN1-218ENST00000440794 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
ITSN1-218ENST00000440794 NUP160Q12769 1436 aa15.5■□□□□ 0.07
ITSN1-218ENST00000440794 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
ITSN1-218ENST00000440794 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
ITSN1-218ENST00000440794 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
ITSN1-218ENST00000440794 ERCC6L2Q5T890 1561 aa15.37■□□□□ 0.05
ITSN1-218ENST00000440794 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
ITSN1-218ENST00000440794 IGF1RP08069 1367 aa15.36■□□□□ 0.05
ITSN1-218ENST00000440794 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms