RNA–Protein interactions for RNA: ENST00000440774.1

HERC2P3-211, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 4

Gene HERC2P3, Length 551 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-211ENST00000440774 NISCHQ9Y2I1 1504 aa24.17■■□□□ 1.46
HERC2P3-211ENST00000440774 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
HERC2P3-211ENST00000440774 ABCC9O60706 1549 aa21.46■■□□□ 1.03
HERC2P3-211ENST00000440774 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
HERC2P3-211ENST00000440774 NACADO15069 1562 aa20.38■□□□□ 0.85
HERC2P3-211ENST00000440774 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
HERC2P3-211ENST00000440774 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
HERC2P3-211ENST00000440774 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
HERC2P3-211ENST00000440774 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
HERC2P3-211ENST00000440774 BICRAQ9NZM4 1560 aa19.96■□□□□ 0.79
HERC2P3-211ENST00000440774 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
HERC2P3-211ENST00000440774 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
HERC2P3-211ENST00000440774 DNAJC5BQ9UF47 199 aa19.9■□□□□ 0.78
HERC2P3-211ENST00000440774 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
HERC2P3-211ENST00000440774 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
HERC2P3-211ENST00000440774 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
HERC2P3-211ENST00000440774 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
HERC2P3-211ENST00000440774 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
HERC2P3-211ENST00000440774 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
HERC2P3-211ENST00000440774 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
HERC2P3-211ENST00000440774 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
HERC2P3-211ENST00000440774 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
HERC2P3-211ENST00000440774 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
HERC2P3-211ENST00000440774 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
HERC2P3-211ENST00000440774 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
HERC2P3-211ENST00000440774 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
HERC2P3-211ENST00000440774 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
HERC2P3-211ENST00000440774 WIZO95785 1651 aa18.52■□□□□ 0.56
HERC2P3-211ENST00000440774 NESP48681 1621 aa18.52■□□□□ 0.55
HERC2P3-211ENST00000440774 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
HERC2P3-211ENST00000440774 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
HERC2P3-211ENST00000440774 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
HERC2P3-211ENST00000440774 CUX2O14529 1486 aa18.36■□□□□ 0.53
HERC2P3-211ENST00000440774 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
HERC2P3-211ENST00000440774 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
HERC2P3-211ENST00000440774 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
HERC2P3-211ENST00000440774 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
HERC2P3-211ENST00000440774 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
HERC2P3-211ENST00000440774 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
HERC2P3-211ENST00000440774 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
HERC2P3-211ENST00000440774 WDR62O43379 1518 aa18.08■□□□□ 0.48
HERC2P3-211ENST00000440774 CFTRP13569 1480 aa18.06■□□□□ 0.48
HERC2P3-211ENST00000440774 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
HERC2P3-211ENST00000440774 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
HERC2P3-211ENST00000440774 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
HERC2P3-211ENST00000440774 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
HERC2P3-211ENST00000440774 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
HERC2P3-211ENST00000440774 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
HERC2P3-211ENST00000440774 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
HERC2P3-211ENST00000440774 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
HERC2P3-211ENST00000440774 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
HERC2P3-211ENST00000440774 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
HERC2P3-211ENST00000440774 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
HERC2P3-211ENST00000440774 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
HERC2P3-211ENST00000440774 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
HERC2P3-211ENST00000440774 SUPT5HO00267 1087 aaKnown RBP17.56■□□□□ 0.4
HERC2P3-211ENST00000440774 CUX1P39880 1505 aa17.54■□□□□ 0.4
HERC2P3-211ENST00000440774 CHD1O14646 1710 aa17.54■□□□□ 0.4
HERC2P3-211ENST00000440774 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
HERC2P3-211ENST00000440774 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
HERC2P3-211ENST00000440774 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
HERC2P3-211ENST00000440774 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.39
HERC2P3-211ENST00000440774 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
HERC2P3-211ENST00000440774 RIMBP3CA6NJZ7 1639 aa17.42■□□□□ 0.38
HERC2P3-211ENST00000440774 RIMBP3BA6NNM3 1639 aa17.42■□□□□ 0.38
HERC2P3-211ENST00000440774 RIMBP3Q9UFD9 1639 aa17.42■□□□□ 0.38
HERC2P3-211ENST00000440774 SOGA1O94964 1423 aa17.41■□□□□ 0.38
HERC2P3-211ENST00000440774 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
HERC2P3-211ENST00000440774 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
HERC2P3-211ENST00000440774 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
HERC2P3-211ENST00000440774 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
HERC2P3-211ENST00000440774 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
HERC2P3-211ENST00000440774 SYNJ1O43426 1573 aa17.34■□□□□ 0.37
HERC2P3-211ENST00000440774 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.37
HERC2P3-211ENST00000440774 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
HERC2P3-211ENST00000440774 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
HERC2P3-211ENST00000440774 ABCA10Q8WWZ4 1543 aa17.28■□□□□ 0.36
HERC2P3-211ENST00000440774 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
HERC2P3-211ENST00000440774 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
HERC2P3-211ENST00000440774 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
HERC2P3-211ENST00000440774 FBLN2P98095 1184 aa17.25■□□□□ 0.35
HERC2P3-211ENST00000440774 CLASP1Q7Z460 1538 aa17.25■□□□□ 0.35
HERC2P3-211ENST00000440774 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
HERC2P3-211ENST00000440774 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
HERC2P3-211ENST00000440774 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
HERC2P3-211ENST00000440774 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
HERC2P3-211ENST00000440774 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
HERC2P3-211ENST00000440774 GRIN2AQ12879 1464 aa17.09■□□□□ 0.33
HERC2P3-211ENST00000440774 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
HERC2P3-211ENST00000440774 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
HERC2P3-211ENST00000440774 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
HERC2P3-211ENST00000440774 ERCC6L2Q5T890 1561 aa17.04■□□□□ 0.32
HERC2P3-211ENST00000440774 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
HERC2P3-211ENST00000440774 NUP160Q12769 1436 aa17.01■□□□□ 0.31
HERC2P3-211ENST00000440774 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
HERC2P3-211ENST00000440774 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.3
HERC2P3-211ENST00000440774 CUL7Q14999 1698 aa16.91■□□□□ 0.3
HERC2P3-211ENST00000440774 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
HERC2P3-211ENST00000440774 IGF1RP08069 1367 aa16.82■□□□□ 0.28
HERC2P3-211ENST00000440774 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms