RNA–Protein interactions for RNA: ENST00000440633.1

LINC00545-201, long intergenic non-protein coding RNA 545, humanhuman

TSL 2 BASIC

Gene LINC00545, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00545-201ENST00000440633 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
LINC00545-201ENST00000440633 ABCC9O60706 1549 aa23.6■■□□□ 1.37
LINC00545-201ENST00000440633 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
LINC00545-201ENST00000440633 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
LINC00545-201ENST00000440633 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
LINC00545-201ENST00000440633 NACADO15069 1562 aa21.96■■□□□ 1.11
LINC00545-201ENST00000440633 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
LINC00545-201ENST00000440633 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
LINC00545-201ENST00000440633 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
LINC00545-201ENST00000440633 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
LINC00545-201ENST00000440633 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
LINC00545-201ENST00000440633 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
LINC00545-201ENST00000440633 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
LINC00545-201ENST00000440633 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
LINC00545-201ENST00000440633 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
LINC00545-201ENST00000440633 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
LINC00545-201ENST00000440633 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
LINC00545-201ENST00000440633 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
LINC00545-201ENST00000440633 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
LINC00545-201ENST00000440633 CUX2O14529 1486 aa20.54■□□□□ 0.88
LINC00545-201ENST00000440633 ERCC6Q03468 1493 aa20.36■□□□□ 0.85
LINC00545-201ENST00000440633 NCAPD3P42695 1498 aa20.25■□□□□ 0.83
LINC00545-201ENST00000440633 NESP48681 1621 aa20.18■□□□□ 0.82
LINC00545-201ENST00000440633 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
LINC00545-201ENST00000440633 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
LINC00545-201ENST00000440633 HMGXB3Q12766 1538 aa20.15■□□□□ 0.82
LINC00545-201ENST00000440633 SMARCA4P51532 1647 aa20.08■□□□□ 0.8
LINC00545-201ENST00000440633 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
LINC00545-201ENST00000440633 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
LINC00545-201ENST00000440633 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
LINC00545-201ENST00000440633 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
LINC00545-201ENST00000440633 PEG3Q9GZU2 1588 aa19.9■□□□□ 0.78
LINC00545-201ENST00000440633 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.77
LINC00545-201ENST00000440633 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
LINC00545-201ENST00000440633 WDR62O43379 1518 aa19.71■□□□□ 0.75
LINC00545-201ENST00000440633 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
LINC00545-201ENST00000440633 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
LINC00545-201ENST00000440633 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
LINC00545-201ENST00000440633 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
LINC00545-201ENST00000440633 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
LINC00545-201ENST00000440633 WIZO95785 1651 aa19.45■□□□□ 0.7
LINC00545-201ENST00000440633 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
LINC00545-201ENST00000440633 RIMBP3CA6NJZ7 1639 aa19.39■□□□□ 0.69
LINC00545-201ENST00000440633 RIMBP3BA6NNM3 1639 aa19.39■□□□□ 0.69
LINC00545-201ENST00000440633 RIMBP3Q9UFD9 1639 aa19.39■□□□□ 0.69
LINC00545-201ENST00000440633 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
LINC00545-201ENST00000440633 CFTRP13569 1480 aa19.31■□□□□ 0.68
LINC00545-201ENST00000440633 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
LINC00545-201ENST00000440633 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
LINC00545-201ENST00000440633 PRDM2Q13029 1718 aa19.21■□□□□ 0.67
LINC00545-201ENST00000440633 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
LINC00545-201ENST00000440633 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
LINC00545-201ENST00000440633 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
LINC00545-201ENST00000440633 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
LINC00545-201ENST00000440633 CHD1O14646 1710 aa19.07■□□□□ 0.64
LINC00545-201ENST00000440633 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
LINC00545-201ENST00000440633 RSF1Q96T23 1441 aaPredicted RBP19.04■□□□□ 0.64
LINC00545-201ENST00000440633 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
LINC00545-201ENST00000440633 TARBP1Q13395 1621 aaKnown RBP18.96■□□□□ 0.63
LINC00545-201ENST00000440633 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
LINC00545-201ENST00000440633 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
LINC00545-201ENST00000440633 CCDC88BA6NC98 1476 aa18.88■□□□□ 0.61
LINC00545-201ENST00000440633 AQRO60306 1485 aaKnown RBP eCLIP18.87■□□□□ 0.61
LINC00545-201ENST00000440633 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
LINC00545-201ENST00000440633 CLASP1Q7Z460 1538 aa18.83■□□□□ 0.6
LINC00545-201ENST00000440633 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
LINC00545-201ENST00000440633 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
LINC00545-201ENST00000440633 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
LINC00545-201ENST00000440633 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
LINC00545-201ENST00000440633 FBLN2P98095 1184 aa18.68■□□□□ 0.58
LINC00545-201ENST00000440633 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
LINC00545-201ENST00000440633 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
LINC00545-201ENST00000440633 TDRD9Q8NDG6 1382 aaKnown RBP18.64■□□□□ 0.57
LINC00545-201ENST00000440633 MAGI1Q96QZ7 1491 aaPredicted RBP18.62■□□□□ 0.57
LINC00545-201ENST00000440633 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
LINC00545-201ENST00000440633 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
LINC00545-201ENST00000440633 SOGA1O94964 1423 aa18.57■□□□□ 0.56
LINC00545-201ENST00000440633 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
LINC00545-201ENST00000440633 SYNJ2O15056 1496 aa18.56■□□□□ 0.56
LINC00545-201ENST00000440633 CUX1P39880 1505 aa18.55■□□□□ 0.56
LINC00545-201ENST00000440633 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
LINC00545-201ENST00000440633 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
LINC00545-201ENST00000440633 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
LINC00545-201ENST00000440633 ABCA5Q8WWZ7 1642 aa18.47■□□□□ 0.55
LINC00545-201ENST00000440633 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
LINC00545-201ENST00000440633 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
LINC00545-201ENST00000440633 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
LINC00545-201ENST00000440633 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
LINC00545-201ENST00000440633 SHROOM2Q13796 1616 aa18.36■□□□□ 0.53
LINC00545-201ENST00000440633 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
LINC00545-201ENST00000440633 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
LINC00545-201ENST00000440633 NUP160Q12769 1436 aa18.32■□□□□ 0.52
LINC00545-201ENST00000440633 DIP2BQ9P265 1576 aa18.18■□□□□ 0.5
LINC00545-201ENST00000440633 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
LINC00545-201ENST00000440633 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
LINC00545-201ENST00000440633 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
LINC00545-201ENST00000440633 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
LINC00545-201ENST00000440633 ABCC10Q5T3U5 1492 aa18.13■□□□□ 0.49
LINC00545-201ENST00000440633 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
LINC00545-201ENST00000440633 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms