RNA–Protein interactions for RNA: ENST00000440626.1

SLC40A1-205, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-205ENST00000440626 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
SLC40A1-205ENST00000440626 ABCC9O60706 1549 aa20.18■□□□□ 0.82
SLC40A1-205ENST00000440626 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
SLC40A1-205ENST00000440626 DNAJC5BQ9UF47 199 aa19.32■□□□□ 0.68
SLC40A1-205ENST00000440626 RB1CC1Q8TDY2 1594 aa19.11■□□□□ 0.65
SLC40A1-205ENST00000440626 NACADO15069 1562 aa18.89■□□□□ 0.62
SLC40A1-205ENST00000440626 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
SLC40A1-205ENST00000440626 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
SLC40A1-205ENST00000440626 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
SLC40A1-205ENST00000440626 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
SLC40A1-205ENST00000440626 DCAF8L2P0C7V8 631 aa18.43■□□□□ 0.54
SLC40A1-205ENST00000440626 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
SLC40A1-205ENST00000440626 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
SLC40A1-205ENST00000440626 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
SLC40A1-205ENST00000440626 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
SLC40A1-205ENST00000440626 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
SLC40A1-205ENST00000440626 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
SLC40A1-205ENST00000440626 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
SLC40A1-205ENST00000440626 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
SLC40A1-205ENST00000440626 CUX2O14529 1486 aa17.71■□□□□ 0.43
SLC40A1-205ENST00000440626 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
SLC40A1-205ENST00000440626 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
SLC40A1-205ENST00000440626 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
SLC40A1-205ENST00000440626 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
SLC40A1-205ENST00000440626 SMARCA2P51531 1590 aa17.25■□□□□ 0.35
SLC40A1-205ENST00000440626 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
SLC40A1-205ENST00000440626 NESP48681 1621 aa17.21■□□□□ 0.35
SLC40A1-205ENST00000440626 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
SLC40A1-205ENST00000440626 LAMC3Q9Y6N6 1575 aa17.13■□□□□ 0.33
SLC40A1-205ENST00000440626 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
SLC40A1-205ENST00000440626 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
SLC40A1-205ENST00000440626 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
SLC40A1-205ENST00000440626 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
SLC40A1-205ENST00000440626 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
SLC40A1-205ENST00000440626 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
SLC40A1-205ENST00000440626 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
SLC40A1-205ENST00000440626 WDR62O43379 1518 aa16.9■□□□□ 0.3
SLC40A1-205ENST00000440626 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
SLC40A1-205ENST00000440626 CADPSQ9ULU8 1353 aa16.84■□□□□ 0.29
SLC40A1-205ENST00000440626 WIZO95785 1651 aa16.84■□□□□ 0.29
SLC40A1-205ENST00000440626 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
SLC40A1-205ENST00000440626 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
SLC40A1-205ENST00000440626 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
SLC40A1-205ENST00000440626 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
SLC40A1-205ENST00000440626 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
SLC40A1-205ENST00000440626 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
SLC40A1-205ENST00000440626 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
SLC40A1-205ENST00000440626 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
SLC40A1-205ENST00000440626 CFTRP13569 1480 aa16.59■□□□□ 0.25
SLC40A1-205ENST00000440626 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
SLC40A1-205ENST00000440626 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
SLC40A1-205ENST00000440626 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
SLC40A1-205ENST00000440626 SUPT5HO00267 1087 aaKnown RBP16.46■□□□□ 0.23
SLC40A1-205ENST00000440626 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
SLC40A1-205ENST00000440626 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
SLC40A1-205ENST00000440626 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
SLC40A1-205ENST00000440626 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
SLC40A1-205ENST00000440626 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
SLC40A1-205ENST00000440626 CYB5RLQ6IPT4 315 aa16.3■□□□□ 0.2
SLC40A1-205ENST00000440626 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
SLC40A1-205ENST00000440626 CHD1O14646 1710 aa16.28■□□□□ 0.2
SLC40A1-205ENST00000440626 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
SLC40A1-205ENST00000440626 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
SLC40A1-205ENST00000440626 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
SLC40A1-205ENST00000440626 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.18
SLC40A1-205ENST00000440626 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.182e-6■■■□□ 18.3
SLC40A1-205ENST00000440626 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
SLC40A1-205ENST00000440626 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
SLC40A1-205ENST00000440626 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
SLC40A1-205ENST00000440626 POLA1P09884 1462 aaPredicted RBP16.09■□□□□ 0.17
SLC40A1-205ENST00000440626 FBLN2P98095 1184 aa16.05■□□□□ 0.16
SLC40A1-205ENST00000440626 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
SLC40A1-205ENST00000440626 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
SLC40A1-205ENST00000440626 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
SLC40A1-205ENST00000440626 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
SLC40A1-205ENST00000440626 SOGA1O94964 1423 aa15.96■□□□□ 0.15
SLC40A1-205ENST00000440626 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
SLC40A1-205ENST00000440626 SYNJ2O15056 1496 aa15.94■□□□□ 0.14
SLC40A1-205ENST00000440626 CUX1P39880 1505 aa15.94■□□□□ 0.14
SLC40A1-205ENST00000440626 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
SLC40A1-205ENST00000440626 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
SLC40A1-205ENST00000440626 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
SLC40A1-205ENST00000440626 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
SLC40A1-205ENST00000440626 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
SLC40A1-205ENST00000440626 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.12
SLC40A1-205ENST00000440626 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
SLC40A1-205ENST00000440626 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.12
SLC40A1-205ENST00000440626 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
SLC40A1-205ENST00000440626 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
SLC40A1-205ENST00000440626 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
SLC40A1-205ENST00000440626 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
SLC40A1-205ENST00000440626 CEP170Q5SW79 1584 aa15.73■□□□□ 0.11
SLC40A1-205ENST00000440626 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
SLC40A1-205ENST00000440626 GRIN2AQ12879 1464 aa15.72■□□□□ 0.11
SLC40A1-205ENST00000440626 NUP160Q12769 1436 aa15.72■□□□□ 0.11
SLC40A1-205ENST00000440626 ADAMTS12P58397 1594 aa15.68■□□□□ 0.1
SLC40A1-205ENST00000440626 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
SLC40A1-205ENST00000440626 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
SLC40A1-205ENST00000440626 MAPKBP1O60336 1514 aa15.58■□□□□ 0.09
SLC40A1-205ENST00000440626 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms