RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
COL16A1-204ENST00000440437 CCDC180Q9P1Z9 1646 aa37.71■■■■□ 3.63
COL16A1-204ENST00000440437 ABCC9O60706 1549 aa37.3■■■■□ 3.56
COL16A1-204ENST00000440437 RB1CC1Q8TDY2 1594 aa35.69■■■■□ 3.3
COL16A1-204ENST00000440437 NACADO15069 1562 aa35.51■■■■□ 3.27
COL16A1-204ENST00000440437 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
COL16A1-204ENST00000440437 MYO15BQ96JP2 1530 aa35.14■■■■□ 3.22
COL16A1-204ENST00000440437 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.2
COL16A1-204ENST00000440437 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
COL16A1-204ENST00000440437 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
COL16A1-204ENST00000440437 DNAJC5BQ9UF47 199 aa34.7■■■■□ 3.15
COL16A1-204ENST00000440437 PABPN1Q86U42 306 aaKnown RBP eCLIP34.68■■■■□ 3.141e-6■■■■□ 25.6
COL16A1-204ENST00000440437 BICRAQ9NZM4 1560 aa34.68■■■■□ 3.14
COL16A1-204ENST00000440437 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
COL16A1-204ENST00000440437 SHROOM4Q9ULL8 1493 aa34.24■■■■□ 3.07
COL16A1-204ENST00000440437 CC2D2AQ9P2K1 1620 aa33.78■■■■□ 3
COL16A1-204ENST00000440437 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
COL16A1-204ENST00000440437 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.97
COL16A1-204ENST00000440437 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
COL16A1-204ENST00000440437 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
COL16A1-204ENST00000440437 ATAD2BQ9ULI0 1458 aa32.68■■■□□ 2.82
COL16A1-204ENST00000440437 SMARCA2P51531 1590 aa32.63■■■□□ 2.81
COL16A1-204ENST00000440437 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
COL16A1-204ENST00000440437 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
COL16A1-204ENST00000440437 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
COL16A1-204ENST00000440437 MROH2BQ7Z745 1585 aa32.4■■■□□ 2.78
COL16A1-204ENST00000440437 BAZ1BQ9UIG0 1483 aaKnown RBP32.37■■■□□ 2.77
COL16A1-204ENST00000440437 ERCC6Q03468 1493 aa32.16■■■□□ 2.74
COL16A1-204ENST00000440437 NESP48681 1621 aa32.15■■■□□ 2.74
COL16A1-204ENST00000440437 CUX2O14529 1486 aa32.09■■■□□ 2.73
COL16A1-204ENST00000440437 WIZO95785 1651 aa32.05■■■□□ 2.72
COL16A1-204ENST00000440437 LAMC3Q9Y6N6 1575 aa32.02■■■□□ 2.72
COL16A1-204ENST00000440437 THOC2Q8NI27 1593 aaKnown RBP31.86■■■□□ 2.69
COL16A1-204ENST00000440437 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
COL16A1-204ENST00000440437 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
COL16A1-204ENST00000440437 PDS5BQ9NTI5 1447 aa31.73■■■□□ 2.67
COL16A1-204ENST00000440437 CADPSQ9ULU8 1353 aa31.72■■■□□ 2.67
COL16A1-204ENST00000440437 TOP2AP11388 1531 aaKnown RBP31.66■■■□□ 2.66
COL16A1-204ENST00000440437 DNAJC5Q9H3Z4 198 aa31.65■■■□□ 2.66
COL16A1-204ENST00000440437 MRC2Q9UBG0 1479 aa31.48■■■□□ 2.63
COL16A1-204ENST00000440437 CFTRP13569 1480 aa31.46■■■□□ 2.63
COL16A1-204ENST00000440437 WDR62O43379 1518 aa31.44■■■□□ 2.62
COL16A1-204ENST00000440437 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
COL16A1-204ENST00000440437 FANCD2Q9BXW9 1451 aa31.39■■■□□ 2.62
COL16A1-204ENST00000440437 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
COL16A1-204ENST00000440437 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
COL16A1-204ENST00000440437 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.58
COL16A1-204ENST00000440437 TOPBP1Q92547 1522 aa30.85■■■□□ 2.53
COL16A1-204ENST00000440437 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
COL16A1-204ENST00000440437 ABCC8Q09428 1581 aa30.78■■■□□ 2.52
COL16A1-204ENST00000440437 IFT140Q96RY7 1462 aa30.76■■■□□ 2.52
COL16A1-204ENST00000440437 ZNF608Q9ULD9 1512 aaPredicted RBP30.69■■■□□ 2.5
COL16A1-204ENST00000440437 EIF4G3O43432 1585 aaKnown RBP30.61■■■□□ 2.49
COL16A1-204ENST00000440437 TARBP1Q13395 1621 aaKnown RBP30.61■■■□□ 2.49
COL16A1-204ENST00000440437 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
COL16A1-204ENST00000440437 OSCARQ8IYS5 282 aa30.53■■■□□ 2.48
COL16A1-204ENST00000440437 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
COL16A1-204ENST00000440437 CUX1P39880 1505 aa30.42■■■□□ 2.46
COL16A1-204ENST00000440437 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.46
COL16A1-204ENST00000440437 RAD54L2Q9Y4B4 1467 aa30.4■■■□□ 2.46
COL16A1-204ENST00000440437 FGD5Q6ZNL6 1462 aa30.39■■■□□ 2.46
COL16A1-204ENST00000440437 CHD1O14646 1710 aa30.36■■■□□ 2.45
COL16A1-204ENST00000440437 SOGA1O94964 1423 aa30.35■■■□□ 2.45
COL16A1-204ENST00000440437 WDR97A6NE52 1622 aa30.34■■■□□ 2.45
COL16A1-204ENST00000440437 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
COL16A1-204ENST00000440437 RIMBP3CA6NJZ7 1639 aa30.27■■■□□ 2.44
COL16A1-204ENST00000440437 RIMBP3BA6NNM3 1639 aa30.27■■■□□ 2.44
COL16A1-204ENST00000440437 RIMBP3Q9UFD9 1639 aa30.27■■■□□ 2.44
COL16A1-204ENST00000440437 TDRD9Q8NDG6 1382 aaKnown RBP30.24■■■□□ 2.43
COL16A1-204ENST00000440437 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
COL16A1-204ENST00000440437 SNAPC4Q5SXM2 1469 aa30.15■■■□□ 2.42
COL16A1-204ENST00000440437 PBRM1Q86U86 1689 aa30.12■■■□□ 2.41
COL16A1-204ENST00000440437 GRIN2BQ13224 1484 aa30.1■■■□□ 2.41
COL16A1-204ENST00000440437 MAGI1Q96QZ7 1491 aaPredicted RBP30.1■■■□□ 2.41
COL16A1-204ENST00000440437 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
COL16A1-204ENST00000440437 ABCA10Q8WWZ4 1543 aa30.08■■■□□ 2.41
COL16A1-204ENST00000440437 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
COL16A1-204ENST00000440437 FBLN2P98095 1184 aa30.05■■■□□ 2.4
COL16A1-204ENST00000440437 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
COL16A1-204ENST00000440437 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
COL16A1-204ENST00000440437 SYNJ1O43426 1573 aa30.01■■■□□ 2.39
COL16A1-204ENST00000440437 CLASP1Q7Z460 1538 aa29.99■■■□□ 2.39
COL16A1-204ENST00000440437 SYNJ2O15056 1496 aa29.98■■■□□ 2.39
COL16A1-204ENST00000440437 WRNQ14191 1432 aaPredicted RBP eCLIP29.97■■■□□ 2.39
COL16A1-204ENST00000440437 CHMP7Q8WUX9 453 aaPredicted RBP29.9■■■□□ 2.38
COL16A1-204ENST00000440437 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
COL16A1-204ENST00000440437 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
COL16A1-204ENST00000440437 CYB5RLQ6IPT4 315 aa29.78■■■□□ 2.36
COL16A1-204ENST00000440437 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
COL16A1-204ENST00000440437 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
COL16A1-204ENST00000440437 CEP170Q5SW79 1584 aa29.65■■■□□ 2.34
COL16A1-204ENST00000440437 FHAD1B1AJZ9 1412 aa29.65■■■□□ 2.34
COL16A1-204ENST00000440437 NUP160Q12769 1436 aa29.63■■■□□ 2.33
COL16A1-204ENST00000440437 SHROOM2Q13796 1616 aa29.54■■■□□ 2.32
COL16A1-204ENST00000440437 ERCC6L2Q5T890 1561 aa29.52■■■□□ 2.32
COL16A1-204ENST00000440437 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
COL16A1-204ENST00000440437 CUL7Q14999 1698 aa29.37■■■□□ 2.29
COL16A1-204ENST00000440437 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
COL16A1-204ENST00000440437 TRHP20396 242 aaPredicted RBP29.34■■■□□ 2.29
COL16A1-204ENST00000440437 IGF1RP08069 1367 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms