RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 NISCHQ9Y2I1 1504 aa33.99■■■■□ 3.03
FAM3A-213ENST00000440318 ABCC9O60706 1549 aa31.31■■■□□ 2.6
FAM3A-213ENST00000440318 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
FAM3A-213ENST00000440318 DNAJC5BQ9UF47 199 aa29.91■■■□□ 2.38
FAM3A-213ENST00000440318 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
FAM3A-213ENST00000440318 NACADO15069 1562 aa29.17■■■□□ 2.26
FAM3A-213ENST00000440318 PABPN1Q86U42 306 aaKnown RBP eCLIP29.07■■■□□ 2.24
FAM3A-213ENST00000440318 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
FAM3A-213ENST00000440318 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
FAM3A-213ENST00000440318 BICRAQ9NZM4 1560 aa28.75■■■□□ 2.19
FAM3A-213ENST00000440318 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
FAM3A-213ENST00000440318 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
FAM3A-213ENST00000440318 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
FAM3A-213ENST00000440318 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
FAM3A-213ENST00000440318 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
FAM3A-213ENST00000440318 EIF4G1Q04637 1599 aaKnown RBP28.06■■■□□ 2.08
FAM3A-213ENST00000440318 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
FAM3A-213ENST00000440318 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
FAM3A-213ENST00000440318 DNAJC5Q9H3Z4 198 aa27.8■■■□□ 2.04
FAM3A-213ENST00000440318 CUX2O14529 1486 aa27.17■■□□□ 1.94
FAM3A-213ENST00000440318 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
FAM3A-213ENST00000440318 NCAPD3P42695 1498 aa26.95■■□□□ 1.91
FAM3A-213ENST00000440318 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
FAM3A-213ENST00000440318 NESP48681 1621 aa26.76■■□□□ 1.87
FAM3A-213ENST00000440318 HMGXB3Q12766 1538 aa26.7■■□□□ 1.87
FAM3A-213ENST00000440318 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
FAM3A-213ENST00000440318 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
FAM3A-213ENST00000440318 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
FAM3A-213ENST00000440318 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
FAM3A-213ENST00000440318 LAMC3Q9Y6N6 1575 aa26.42■■□□□ 1.82
FAM3A-213ENST00000440318 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
FAM3A-213ENST00000440318 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
FAM3A-213ENST00000440318 PEG3Q9GZU2 1588 aa26.38■■□□□ 1.81
FAM3A-213ENST00000440318 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
FAM3A-213ENST00000440318 PDS5BQ9NTI5 1447 aa26.27■■□□□ 1.8
FAM3A-213ENST00000440318 MROH2BQ7Z745 1585 aa26.22■■□□□ 1.79
FAM3A-213ENST00000440318 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
FAM3A-213ENST00000440318 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
FAM3A-213ENST00000440318 WDR62O43379 1518 aa26.09■■□□□ 1.77
FAM3A-213ENST00000440318 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.73
FAM3A-213ENST00000440318 WIZO95785 1651 aa25.87■■□□□ 1.73
FAM3A-213ENST00000440318 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
FAM3A-213ENST00000440318 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
FAM3A-213ENST00000440318 CFTRP13569 1480 aa25.7■■□□□ 1.7
FAM3A-213ENST00000440318 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
FAM3A-213ENST00000440318 RIMBP3CA6NJZ7 1639 aa25.61■■□□□ 1.69
FAM3A-213ENST00000440318 RIMBP3BA6NNM3 1639 aa25.61■■□□□ 1.69
FAM3A-213ENST00000440318 RIMBP3Q9UFD9 1639 aa25.61■■□□□ 1.69
FAM3A-213ENST00000440318 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
FAM3A-213ENST00000440318 ARHGEF11O15085 1522 aa25.47■■□□□ 1.67
FAM3A-213ENST00000440318 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
FAM3A-213ENST00000440318 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
FAM3A-213ENST00000440318 IFT140Q96RY7 1462 aa25.39■■□□□ 1.65
FAM3A-213ENST00000440318 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
FAM3A-213ENST00000440318 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
FAM3A-213ENST00000440318 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
FAM3A-213ENST00000440318 CYB5RLQ6IPT4 315 aa25.27■■□□□ 1.64
FAM3A-213ENST00000440318 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
FAM3A-213ENST00000440318 CHD1O14646 1710 aa25.19■■□□□ 1.62
FAM3A-213ENST00000440318 ARAP1Q96P48 1450 aa25.19■■□□□ 1.62
FAM3A-213ENST00000440318 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
FAM3A-213ENST00000440318 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.614e-7■■■□□ 18.5
FAM3A-213ENST00000440318 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
FAM3A-213ENST00000440318 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
FAM3A-213ENST00000440318 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
FAM3A-213ENST00000440318 FBLN2P98095 1184 aa25.04■■□□□ 1.6
FAM3A-213ENST00000440318 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
FAM3A-213ENST00000440318 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
FAM3A-213ENST00000440318 CLASP1Q7Z460 1538 aa24.9■■□□□ 1.58
FAM3A-213ENST00000440318 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
FAM3A-213ENST00000440318 SNAPC4Q5SXM2 1469 aa24.87■■□□□ 1.57
FAM3A-213ENST00000440318 SOGA1O94964 1423 aa24.84■■□□□ 1.57
FAM3A-213ENST00000440318 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
FAM3A-213ENST00000440318 SYNJ1O43426 1573 aa24.78■■□□□ 1.56
FAM3A-213ENST00000440318 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
FAM3A-213ENST00000440318 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
FAM3A-213ENST00000440318 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
FAM3A-213ENST00000440318 MAGI1Q96QZ7 1491 aaPredicted RBP24.74■■□□□ 1.55
FAM3A-213ENST00000440318 GRIN2BQ13224 1484 aa24.69■■□□□ 1.54
FAM3A-213ENST00000440318 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
FAM3A-213ENST00000440318 CUX1P39880 1505 aa24.66■■□□□ 1.54
FAM3A-213ENST00000440318 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.54
FAM3A-213ENST00000440318 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
FAM3A-213ENST00000440318 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
FAM3A-213ENST00000440318 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
FAM3A-213ENST00000440318 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
FAM3A-213ENST00000440318 GRIN2AQ12879 1464 aa24.39■■□□□ 1.5
FAM3A-213ENST00000440318 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
FAM3A-213ENST00000440318 NUP160Q12769 1436 aa24.33■■□□□ 1.49
FAM3A-213ENST00000440318 ADAMTS12P58397 1594 aa24.33■■□□□ 1.48
FAM3A-213ENST00000440318 SHROOM2Q13796 1616 aa24.3■■□□□ 1.48
FAM3A-213ENST00000440318 KIF13AQ9H1H9 1805 aa24.29■■□□□ 1.48
FAM3A-213ENST00000440318 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
FAM3A-213ENST00000440318 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
FAM3A-213ENST00000440318 PRG4Q92954 1404 aaPredicted RBP24.13■■□□□ 1.45
FAM3A-213ENST00000440318 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
FAM3A-213ENST00000440318 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
FAM3A-213ENST00000440318 TOP2BQ02880 1626 aa24.09■■□□□ 1.45
FAM3A-213ENST00000440318 ABCC10Q5T3U5 1492 aa24.07■■□□□ 1.44
FAM3A-213ENST00000440318 FAM69CQ0P6D2 419 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms