RNA–Protein interactions for RNA: ENST00000440174.1

FGFR1-213, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 389 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-213ENST00000440174 NISCHQ9Y2I1 1504 aa21.47■■□□□ 1.03
FGFR1-213ENST00000440174 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
FGFR1-213ENST00000440174 ABCC9O60706 1549 aa19■□□□□ 0.63
FGFR1-213ENST00000440174 RB1CC1Q8TDY2 1594 aa18.13■□□□□ 0.49
FGFR1-213ENST00000440174 NACADO15069 1562 aa18.06■□□□□ 0.48
FGFR1-213ENST00000440174 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
FGFR1-213ENST00000440174 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
FGFR1-213ENST00000440174 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
FGFR1-213ENST00000440174 DCAF8L2P0C7V8 631 aa17.87■□□□□ 0.45
FGFR1-213ENST00000440174 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
FGFR1-213ENST00000440174 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
FGFR1-213ENST00000440174 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
FGFR1-213ENST00000440174 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
FGFR1-213ENST00000440174 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
FGFR1-213ENST00000440174 SHROOM4Q9ULL8 1493 aa17.44■□□□□ 0.38
FGFR1-213ENST00000440174 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
FGFR1-213ENST00000440174 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
FGFR1-213ENST00000440174 CECR2Q9BXF3 1484 aa17.08■□□□□ 0.32
FGFR1-213ENST00000440174 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
FGFR1-213ENST00000440174 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
FGFR1-213ENST00000440174 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-213ENST00000440174 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
FGFR1-213ENST00000440174 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
FGFR1-213ENST00000440174 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
FGFR1-213ENST00000440174 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
FGFR1-213ENST00000440174 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
FGFR1-213ENST00000440174 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
FGFR1-213ENST00000440174 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
FGFR1-213ENST00000440174 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
FGFR1-213ENST00000440174 WIZO95785 1651 aa16.37■□□□□ 0.21
FGFR1-213ENST00000440174 CUX2O14529 1486 aa16.36■□□□□ 0.21
FGFR1-213ENST00000440174 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
FGFR1-213ENST00000440174 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
FGFR1-213ENST00000440174 NESP48681 1621 aa16.24■□□□□ 0.19
FGFR1-213ENST00000440174 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
FGFR1-213ENST00000440174 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
FGFR1-213ENST00000440174 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
FGFR1-213ENST00000440174 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
FGFR1-213ENST00000440174 CADPSQ9ULU8 1353 aa16.11■□□□□ 0.17
FGFR1-213ENST00000440174 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
FGFR1-213ENST00000440174 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
FGFR1-213ENST00000440174 CFTRP13569 1480 aa16.01■□□□□ 0.15
FGFR1-213ENST00000440174 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
FGFR1-213ENST00000440174 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
FGFR1-213ENST00000440174 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
FGFR1-213ENST00000440174 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.14
FGFR1-213ENST00000440174 WDR62O43379 1518 aa15.95■□□□□ 0.14
FGFR1-213ENST00000440174 URB2Q14146 1524 aaKnown RBP15.8■□□□□ 0.12
FGFR1-213ENST00000440174 SUPT5HO00267 1087 aaKnown RBP15.73■□□□□ 0.11
FGFR1-213ENST00000440174 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
FGFR1-213ENST00000440174 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
FGFR1-213ENST00000440174 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
FGFR1-213ENST00000440174 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
FGFR1-213ENST00000440174 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
FGFR1-213ENST00000440174 EIF4G3O43432 1585 aaKnown RBP15.58■□□□□ 0.08
FGFR1-213ENST00000440174 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
FGFR1-213ENST00000440174 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
FGFR1-213ENST00000440174 CUX1P39880 1505 aa15.53■□□□□ 0.08
FGFR1-213ENST00000440174 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
FGFR1-213ENST00000440174 FGD5Q6ZNL6 1462 aa15.52■□□□□ 0.07
FGFR1-213ENST00000440174 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
FGFR1-213ENST00000440174 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
FGFR1-213ENST00000440174 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
FGFR1-213ENST00000440174 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
FGFR1-213ENST00000440174 RAD54L2Q9Y4B4 1467 aa15.45■□□□□ 0.06
FGFR1-213ENST00000440174 SOGA1O94964 1423 aa15.44■□□□□ 0.06
FGFR1-213ENST00000440174 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
FGFR1-213ENST00000440174 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.06
FGFR1-213ENST00000440174 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
FGFR1-213ENST00000440174 ARHGEF11O15085 1522 aa15.39■□□□□ 0.05
FGFR1-213ENST00000440174 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
FGFR1-213ENST00000440174 CHD1O14646 1710 aa15.39■□□□□ 0.05
FGFR1-213ENST00000440174 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
FGFR1-213ENST00000440174 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
FGFR1-213ENST00000440174 ABCA10Q8WWZ4 1543 aa15.36■□□□□ 0.05
FGFR1-213ENST00000440174 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
FGFR1-213ENST00000440174 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
FGFR1-213ENST00000440174 SNAPC4Q5SXM2 1469 aa15.34■□□□□ 0.05
FGFR1-213ENST00000440174 GRIN2BQ13224 1484 aa15.33■□□□□ 0.05
FGFR1-213ENST00000440174 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.05
FGFR1-213ENST00000440174 CYB5RLQ6IPT4 315 aa15.33■□□□□ 0.04
FGFR1-213ENST00000440174 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
FGFR1-213ENST00000440174 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
FGFR1-213ENST00000440174 FBLN2P98095 1184 aa15.26■□□□□ 0.03
FGFR1-213ENST00000440174 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
FGFR1-213ENST00000440174 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
FGFR1-213ENST00000440174 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
FGFR1-213ENST00000440174 ERICH3Q5RHP9 1530 aa15.19■□□□□ 0.02
FGFR1-213ENST00000440174 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
FGFR1-213ENST00000440174 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
FGFR1-213ENST00000440174 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
FGFR1-213ENST00000440174 FHAD1B1AJZ9 1412 aa15.13■□□□□ 0.01
FGFR1-213ENST00000440174 CUL7Q14999 1698 aa15.09■□□□□ 0.01
FGFR1-213ENST00000440174 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
FGFR1-213ENST00000440174 CEP170Q5SW79 1584 aa15.08■□□□□ 0
FGFR1-213ENST00000440174 NUP160Q12769 1436 aa15.06■□□□□ 0
FGFR1-213ENST00000440174 AEBP2Q6ZN18 517 aaPredicted RBP15.05■□□□□ -0
FGFR1-213ENST00000440174 RUSC2Q8N2Y8 1516 aa15.02□□□□□ -0.01
FGFR1-213ENST00000440174 SHROOM2Q13796 1616 aa15□□□□□ -0.01
FGFR1-213ENST00000440174 IGF1RP08069 1367 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms